EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000006298 (Gene tree)
Gene ID
106960933
Gene Symbol
YTHDF1 (1 of many)
Alias
-
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Minus strand
Length
9213 bases
Position
chrKQ545371.1:74510-83722
Accession
106960933
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000004577YTHPF04146.155.8e-4111
ENSPLAP00000004555YTHPF04146.156.1e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000009419YTHDF1 (1 of many)-2021857-ENSPLAP00000004555618 (aa)--
ENSPLAT00000009397YTHDF1 (1 of many)-2014898XM_015054339ENSPLAP00000004577617 (aa)XP_014909825UPI00072E92F1
Gene Model
Click here to download ENSPLAG00000006298's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006298's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000006298YTHDF19957.508ENSPLAG00000009752ythdf29860.299
ENSPLAG00000006298YTHDF19975.039ENSPLAG00000006653ythdf110075.000
ENSPLAG00000006298YTHDF19660.543ENSPLAG00000006902ythdf39961.218
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000006298YTHDF19571.235ENSG00000149658YTHDF110070.096Homo_sapiens
ENSPLAG00000006298YTHDF19978.275ENSAPOG00000004358ythdf19977.831Acanthochromis_polyacanthus
ENSPLAG00000006298YTHDF110097.407ENSAPOG00000010796YTHDF110097.407Acanthochromis_polyacanthus
ENSPLAG00000006298YTHDF19478.824ENSACIG00000020083YTHDF110086.246Amphilophus_citrinellus
ENSPLAG00000006298YTHDF19977.901ENSAOCG00000022251ythdf19977.997Amphiprion_ocellaris
ENSPLAG00000006298YTHDF110097.083ENSAOCG00000012567YTHDF110097.083Amphiprion_ocellaris
ENSPLAG00000006298YTHDF110097.245ENSAPEG00000008750YTHDF110097.245Amphiprion_percula
ENSPLAG00000006298YTHDF19977.901ENSAPEG00000021878ythdf19977.671Amphiprion_percula
ENSPLAG00000006298YTHDF19977.440ENSATEG00000023840ythdf19976.094Anabas_testudineus
ENSPLAG00000006298YTHDF110096.926ENSATEG00000005996YTHDF110096.926Anabas_testudineus
ENSPLAG00000006298YTHDF19472.061ENSAPLG00000005985YTHDF19971.824Anas_platyrhynchos
ENSPLAG00000006298YTHDF19573.854ENSACAG00000005560YTHDF110072.508Anolis_carolinensis
ENSPLAG00000006298YTHDF19570.897ENSANAG00000034786-10069.726Aotus_nancymaae
ENSPLAG00000006298YTHDF110058.414ENSANAG00000021022-10059.355Aotus_nancymaae
ENSPLAG00000006298YTHDF110094.822ENSACLG00000025518YTHDF110094.984Astatotilapia_calliptera
ENSPLAG00000006298YTHDF19471.550ENSBTAG00000010383YTHDF110069.453Bos_taurus
ENSPLAG00000006298YTHDF19570.897ENSCJAG00000010056YTHDF110070.048Callithrix_jacchus
ENSPLAG00000006298YTHDF18766.357ENSCAFG00000012772YTHDF19969.298Canis_familiaris
ENSPLAG00000006298YTHDF18766.357ENSCAFG00020001214YTHDF19969.298Canis_lupus_dingo
ENSPLAG00000006298YTHDF19470.119ENSCHIG00000026494YTHDF110069.132Capra_hircus
ENSPLAG00000006298YTHDF19469.625ENSTSYG00000033436YTHDF19968.480Carlito_syrichta
ENSPLAG00000006298YTHDF19665.442ENSCCAG00000024650YTHDF110069.243Cebus_capucinus
ENSPLAG00000006298YTHDF19571.404ENSCATG00000033272YTHDF110070.531Cercocebus_atys
ENSPLAG00000006298YTHDF19571.186ENSCLAG00000005989YTHDF110069.872Chinchilla_lanigera
ENSPLAG00000006298YTHDF19571.404ENSCSAG00000016266YTHDF110070.531Chlorocebus_sabaeus
ENSPLAG00000006298YTHDF19573.064ENSCPBG00000027183YTHDF110071.704Chrysemys_picta_bellii
ENSPLAG00000006298YTHDF19471.355ENSCANG00000029082YTHDF19870.473Colobus_angolensis_palliatus
ENSPLAG00000006298YTHDF19771.833ENSCGRG00001016568Ythdf110070.853Cricetulus_griseus_chok1gshd
ENSPLAG00000006298YTHDF19471.897ENSCGRG00000009207Ythdf110070.752Cricetulus_griseus_crigri
ENSPLAG00000006298YTHDF19476.150ENSCSEG00000020623YTHDF19977.167Cynoglossus_semilaevis
ENSPLAG00000006298YTHDF110097.896ENSCVAG00000014378YTHDF110097.896Cyprinodon_variegatus
ENSPLAG00000006298YTHDF19975.120ENSCVAG00000017940ythdf19974.603Cyprinodon_variegatus
ENSPLAG00000006298YTHDF110080.806ENSDARG00000016447ythdf110079.875Danio_rerio
ENSPLAG00000006298YTHDF19571.647ENSDNOG00000043590YTHDF110071.613Dasypus_novemcinctus
ENSPLAG00000006298YTHDF17954.023ENSETEG00000017860-9854.023Echinops_telfairi
ENSPLAG00000006298YTHDF19964.630ENSEASG00005023186YTHDF110070.531Equus_asinus_asinus
ENSPLAG00000006298YTHDF19667.114ENSECAG00000019475YTHDF110069.877Equus_caballus
ENSPLAG00000006298YTHDF18870.696ENSEEUG00000007461YTHDF110069.828Erinaceus_europaeus
ENSPLAG00000006298YTHDF19979.467ENSELUG00000022768ythdf19980.696Esox_lucius
ENSPLAG00000006298YTHDF19981.395ENSELUG00000001906YTHDF19977.436Esox_lucius
ENSPLAG00000006298YTHDF19572.927ENSFALG00000010463YTHDF110071.498Ficedula_albicollis
ENSPLAG00000006298YTHDF19570.628ENSFDAG00000019602YTHDF110069.726Fukomys_damarensis
ENSPLAG00000006298YTHDF110097.087ENSFHEG00000002540YTHDF110097.087Fundulus_heteroclitus
ENSPLAG00000006298YTHDF19976.083ENSFHEG00000023218ythdf110074.833Fundulus_heteroclitus
ENSPLAG00000006298YTHDF18990.187ENSGMOG00000019610ythdf18490.187Gadus_morhua
ENSPLAG00000006298YTHDF19572.758ENSGALG00000005745YTHDF110072.026Gallus_gallus
ENSPLAG00000006298YTHDF110099.838ENSGAFG00000021100YTHDF110099.838Gambusia_affinis
ENSPLAG00000006298YTHDF19987.642ENSGACG00000002613YTHDF19988.618Gasterosteus_aculeatus
ENSPLAG00000006298YTHDF19977.244ENSGACG00000012014ythdf19976.198Gasterosteus_aculeatus
ENSPLAG00000006298YTHDF19573.649ENSGAGG00000003007YTHDF110071.865Gopherus_agassizii
ENSPLAG00000006298YTHDF19571.622ENSGGOG00000008340YTHDF110070.418Gorilla_gorilla
ENSPLAG00000006298YTHDF110095.307ENSHBUG00000004875YTHDF110095.469Haplochromis_burtoni
ENSPLAG00000006298YTHDF19977.120ENSHBUG00000011284ythdf19975.980Haplochromis_burtoni
ENSPLAG00000006298YTHDF19570.289ENSHGLG00000006585YTHDF110069.726Heterocephalus_glaber_female
ENSPLAG00000006298YTHDF19570.289ENSHGLG00100004683YTHDF110069.726Heterocephalus_glaber_male
ENSPLAG00000006298YTHDF19676.539ENSHCOG00000008866ythdf19976.112Hippocampus_comes
ENSPLAG00000006298YTHDF110088.264ENSHCOG00000011303YTHDF110088.264Hippocampus_comes
ENSPLAG00000006298YTHDF110080.738ENSIPUG00000000425Ythdf110079.647Ictalurus_punctatus
ENSPLAG00000006298YTHDF19669.833ENSJJAG00000013589Ythdf110070.425Jaculus_jaculus
ENSPLAG00000006298YTHDF19977.528ENSKMAG00000005595ythdf19976.480Kryptolebias_marmoratus
ENSPLAG00000006298YTHDF110096.284ENSKMAG00000017472YTHDF110096.284Kryptolebias_marmoratus
ENSPLAG00000006298YTHDF19977.047ENSLBEG00000014105ythdf19977.021Labrus_bergylta
ENSPLAG00000006298YTHDF110094.003ENSLBEG00000012068YTHDF110094.003Labrus_bergylta
ENSPLAG00000006298YTHDF19472.633ENSLACG00000014195YTHDF19873.024Latimeria_chalumnae
ENSPLAG00000006298YTHDF110078.065ENSLOCG00000005020ythdf110077.581Lepisosteus_oculatus
ENSPLAG00000006298YTHDF19572.466ENSLAFG00000008884YTHDF110070.418Loxodonta_africana
ENSPLAG00000006298YTHDF19571.404ENSMFAG00000042868YTHDF110070.531Macaca_fascicularis
ENSPLAG00000006298YTHDF19571.404ENSMMUG00000009227YTHDF110070.531Macaca_mulatta
ENSPLAG00000006298YTHDF19571.404ENSMNEG00000030851YTHDF110070.531Macaca_nemestrina
ENSPLAG00000006298YTHDF19571.743ENSMLEG00000009252YTHDF110070.588Mandrillus_leucophaeus
ENSPLAG00000006298YTHDF110095.146ENSMAMG00000011072YTHDF110095.955Mastacembelus_armatus
ENSPLAG00000006298YTHDF19975.840ENSMAMG00000024255ythdf19972.488Mastacembelus_armatus
ENSPLAG00000006298YTHDF110095.307ENSMZEG00005023596YTHDF110095.469Maylandia_zebra
ENSPLAG00000006298YTHDF19977.316ENSMZEG00005026397ythdf19976.899Maylandia_zebra
ENSPLAG00000006298YTHDF19571.986ENSMGAG00000006139YTHDF19971.290Meleagris_gallopavo
ENSPLAG00000006298YTHDF19571.817ENSMAUG00000017660Ythdf110070.692Mesocricetus_auratus
ENSPLAG00000006298YTHDF19570.995ENSMICG00000032266YTHDF110069.823Microcebus_murinus
ENSPLAG00000006298YTHDF19571.647ENSMOCG00000013573Ythdf110070.692Microtus_ochrogaster
ENSPLAG00000006298YTHDF19875.000ENSMMOG00000017500ythdf19973.726Mola_mola
ENSPLAG00000006298YTHDF19991.572ENSMMOG00000020467YTHDF19991.896Mola_mola
ENSPLAG00000006298YTHDF18771.985ENSMODG00000016842YTHDF110070.681Monodelphis_domestica
ENSPLAG00000006298YTHDF19976.837ENSMALG00000015672ythdf19976.358Monopterus_albus
ENSPLAG00000006298YTHDF110092.581ENSMALG00000022209YTHDF110092.581Monopterus_albus
ENSPLAG00000006298YTHDF19571.477MGP_CAROLIEiJ_G0024790Ythdf110070.370Mus_caroli
ENSPLAG00000006298YTHDF19571.477ENSMUSG00000038848Ythdf110070.370Mus_musculus
ENSPLAG00000006298YTHDF19571.477MGP_PahariEiJ_G0026237Ythdf110070.370Mus_pahari
ENSPLAG00000006298YTHDF19571.477MGP_SPRETEiJ_G0025715Ythdf110070.370Mus_spretus
ENSPLAG00000006298YTHDF18767.286ENSMPUG00000008111YTHDF110066.209Mustela_putorius_furo
ENSPLAG00000006298YTHDF19371.724ENSMLUG00000002241YTHDF19769.852Myotis_lucifugus
ENSPLAG00000006298YTHDF19572.203ENSNGAG00000000334Ythdf110070.692Nannospalax_galili
ENSPLAG00000006298YTHDF19477.647ENSNBRG00000008213ythdf19876.710Neolamprologus_brichardi
ENSPLAG00000006298YTHDF19495.026ENSNBRG00000015321YTHDF19995.134Neolamprologus_brichardi
ENSPLAG00000006298YTHDF19364.360ENSOPRG00000001758-9964.433Ochotona_princeps
ENSPLAG00000006298YTHDF19868.534ENSODEG00000004380-10069.231Octodon_degus
ENSPLAG00000006298YTHDF19457.021ENSODEG00000000074-10058.266Octodon_degus
ENSPLAG00000006298YTHDF19477.234ENSONIG00000016799ythdf19976.414Oreochromis_niloticus
ENSPLAG00000006298YTHDF19572.681ENSOANG00000003723YTHDF110071.680Ornithorhynchus_anatinus
ENSPLAG00000006298YTHDF17586.486ENSOCUG00000012780YTHDF110064.687Oryctolagus_cuniculus
ENSPLAG00000006298YTHDF110091.086ENSORLG00000009739YTHDF110092.880Oryzias_latipes
ENSPLAG00000006298YTHDF19976.000ENSORLG00000014665YTHDF19973.817Oryzias_latipes
ENSPLAG00000006298YTHDF110090.600ENSORLG00020001332YTHDF110092.395Oryzias_latipes_hni
ENSPLAG00000006298YTHDF19976.442ENSORLG00020000307ythdf19974.250Oryzias_latipes_hni
ENSPLAG00000006298YTHDF110090.762ENSORLG00015018321YTHDF110092.557Oryzias_latipes_hsok
ENSPLAG00000006298YTHDF19976.282ENSORLG00015006302ythdf19974.092Oryzias_latipes_hsok
ENSPLAG00000006298YTHDF110092.869ENSOMEG00000011843YTHDF110092.869Oryzias_melastigma
ENSPLAG00000006298YTHDF19976.726ENSOMEG00000002941YTHDF19975.159Oryzias_melastigma
ENSPLAG00000006298YTHDF19569.661ENSOGAG00000000480YTHDF110068.700Otolemur_garnettii
ENSPLAG00000006298YTHDF19571.622ENSPPAG00000023277YTHDF110070.521Pan_paniscus
ENSPLAG00000006298YTHDF17779.913ENSPTIG00000017355YTHDF19779.134Panthera_tigris_altaica
ENSPLAG00000006298YTHDF19571.622ENSPTRG00000013730YTHDF110070.418Pan_troglodytes
ENSPLAG00000006298YTHDF19571.404ENSPANG00000021472YTHDF110070.531Papio_anubis
ENSPLAG00000006298YTHDF19674.037ENSPKIG00000005026YTHDF19872.803Paramormyrops_kingsleyae
ENSPLAG00000006298YTHDF19771.096ENSPSIG00000005529YTHDF19872.727Pelodiscus_sinensis
ENSPLAG00000006298YTHDF19891.887ENSPMGG00000009101YTHDF19991.887Periophthalmus_magnuspinnatus
ENSPLAG00000006298YTHDF19278.109ENSPMGG00000015328ythdf19778.045Periophthalmus_magnuspinnatus
ENSPLAG00000006298YTHDF19472.241ENSPEMG00000020199Ythdf19972.117Peromyscus_maniculatus_bairdii
ENSPLAG00000006298YTHDF19773.167ENSPCIG00000017170YTHDF110071.030Phascolarctos_cinereus
ENSPLAG00000006298YTHDF19975.039ENSPFOG00000005405ythdf19975.684Poecilia_formosa
ENSPLAG00000006298YTHDF110099.838ENSPMEG00000020969-10099.838Poecilia_mexicana
ENSPLAG00000006298YTHDF19974.842ENSPMEG00000023753ythdf110075.208Poecilia_mexicana
ENSPLAG00000006298YTHDF19799.333ENSPREG00000017662YTHDF19899.333Poecilia_reticulata
ENSPLAG00000006298YTHDF19975.594ENSPREG00000002173ythdf110075.667Poecilia_reticulata
ENSPLAG00000006298YTHDF17887.179ENSPPYG00000011226YTHDF110083.871Pongo_abelii
ENSPLAG00000006298YTHDF18768.566ENSPCAG00000002452YTHDF110068.525Procavia_capensis
ENSPLAG00000006298YTHDF19571.017ENSPCOG00000025969YTHDF110069.365Propithecus_coquereli
ENSPLAG00000006298YTHDF19662.795ENSPVAG00000017568YTHDF19966.779Pteropus_vampyrus
ENSPLAG00000006298YTHDF19977.120ENSPNYG00000014007ythdf19976.490Pundamilia_nyererei
ENSPLAG00000006298YTHDF110095.307ENSPNYG00000002266YTHDF110095.469Pundamilia_nyererei
ENSPLAG00000006298YTHDF110077.831ENSPNAG00000012447ythdf110082.616Pygocentrus_nattereri
ENSPLAG00000006298YTHDF19571.138ENSRNOG00000027015Ythdf110070.370Rattus_norvegicus
ENSPLAG00000006298YTHDF19570.558ENSRBIG00000044959YTHDF110070.048Rhinopithecus_bieti
ENSPLAG00000006298YTHDF19570.558ENSRROG00000033014YTHDF110070.048Rhinopithecus_roxellana
ENSPLAG00000006298YTHDF19369.377ENSSBOG00000027278YTHDF110068.301Saimiri_boliviensis_boliviensis
ENSPLAG00000006298YTHDF19472.526ENSSHAG00000010430YTHDF18971.129Sarcophilus_harrisii
ENSPLAG00000006298YTHDF110078.317ENSSFOG00015000284ythdf110078.296Scleropages_formosus
ENSPLAG00000006298YTHDF16691.720ENSSMAG00000013715ythdf19086.111Scophthalmus_maximus
ENSPLAG00000006298YTHDF19989.362ENSSMAG00000007635YTHDF110087.289Scophthalmus_maximus
ENSPLAG00000006298YTHDF110092.271ENSSDUG00000015823YTHDF110092.429Seriola_dumerili
ENSPLAG00000006298YTHDF19978.240ENSSDUG00000000435ythdf19977.636Seriola_dumerili
ENSPLAG00000006298YTHDF110093.153ENSSLDG00000001054YTHDF110093.312Seriola_lalandi_dorsalis
ENSPLAG00000006298YTHDF19978.331ENSSLDG00000024948ythdf19977.849Seriola_lalandi_dorsalis
ENSPLAG00000006298YTHDF18770.926ENSSPUG00000015143YTHDF110070.537Sphenodon_punctatus
ENSPLAG00000006298YTHDF19976.862ENSSPAG00000014989ythdf19976.424Stegastes_partitus
ENSPLAG00000006298YTHDF110096.602ENSSPAG00000003666YTHDF110096.602Stegastes_partitus
ENSPLAG00000006298YTHDF19472.899ENSTGUG00000007565YTHDF110071.615Taeniopygia_guttata
ENSPLAG00000006298YTHDF19491.966ENSTRUG00000005049YTHDF19992.013Takifugu_rubripes
ENSPLAG00000006298YTHDF19476.988ENSTRUG00000004288ythdf19977.870Takifugu_rubripes
ENSPLAG00000006298YTHDF19483.849ENSTNIG00000003975YTHDF110081.199Tetraodon_nigroviridis
ENSPLAG00000006298YTHDF19474.276ENSTNIG00000012490ythdf19974.457Tetraodon_nigroviridis
ENSPLAG00000006298YTHDF18766.543ENSVVUG00000015275YTHDF19969.298Vulpes_vulpes
ENSPLAG00000006298YTHDF19573.559ENSXETG00000027086ythdf19772.788Xenopus_tropicalis
ENSPLAG00000006298YTHDF19475.845ENSXCOG00000002490ythdf19575.897Xiphophorus_couchianus
ENSPLAG00000006298YTHDF19898.342ENSXCOG00000008115YTHDF19998.342Xiphophorus_couchianus
ENSPLAG00000006298YTHDF110099.352ENSXMAG00000015644YTHDF110099.352Xiphophorus_maculatus
ENSPLAG00000006298YTHDF19976.973ENSXMAG00000008525ythdf19976.265Xiphophorus_maculatus

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