EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006318 (Gene tree)
Gene ID: 106941223
Gene Symbol: rbm5
Alias: -
Full Name: RNA binding motif protein 5
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8897 bases
Position: chrLMXD01035819.1:1444-10340
Accession: 106941223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004603	zf-RanBP	PF00641.18	7.7e-10	1	1
ENSPLAP00000004603	RRM_1	PF00076.22	5.5e-13	1	2
ENSPLAP00000004603	RRM_1	PF00076.22	5.5e-13	2	2
ENSPLAP00000004603	G-patch	PF01585.23	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009352	-	3303	XM_015024166	ENSPLAP00000004603	855 (aa)	XP_014879652	UPI00072EE5FF

Gene Model

Click here to download ENSPLAG00000006318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006318	rbm5	84	44.156	ENSPLAG00000013887	rbm10	72	46.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006318	rbm5	100	61.521	ENSG00000003756	RBM5	100	60.759	Homo_sapiens
ENSPLAG00000006318	rbm5	100	65.859	ENSAPOG00000006011	-	100	65.820	Acanthochromis_polyacanthus
ENSPLAG00000006318	rbm5	100	83.991	ENSAPOG00000016625	rbm5	100	82.947	Acanthochromis_polyacanthus
ENSPLAG00000006318	rbm5	100	61.751	ENSAMEG00000012005	RBM5	100	60.875	Ailuropoda_melanoleuca
ENSPLAG00000006318	rbm5	66	84.392	ENSACIG00000007571	rbm5	100	82.804	Amphilophus_citrinellus
ENSPLAG00000006318	rbm5	99	59.028	ENSACIG00000021310	-	99	58.188	Amphilophus_citrinellus
ENSPLAG00000006318	rbm5	100	83.643	ENSAOCG00000002880	rbm5	100	83.063	Amphiprion_ocellaris
ENSPLAG00000006318	rbm5	99	62.877	ENSAOCG00000017312	-	99	62.834	Amphiprion_ocellaris
ENSPLAG00000006318	rbm5	100	65.975	ENSAPEG00000018222	RBM5	100	65.741	Amphiprion_percula
ENSPLAG00000006318	rbm5	90	81.982	ENSAPEG00000011862	rbm5	92	81.725	Amphiprion_percula
ENSPLAG00000006318	rbm5	100	66.286	ENSATEG00000003838	-	100	65.332	Anabas_testudineus
ENSPLAG00000006318	rbm5	100	81.723	ENSATEG00000024663	rbm5	100	81.024	Anabas_testudineus
ENSPLAG00000006318	rbm5	93	62.687	ENSAPLG00000011176	RBM5	99	63.445	Anas_platyrhynchos
ENSPLAG00000006318	rbm5	100	59.864	ENSACAG00000008580	RBM5	100	58.998	Anolis_carolinensis
ENSPLAG00000006318	rbm5	100	61.751	ENSANAG00000025199	RBM5	100	60.990	Aotus_nancymaae
ENSPLAG00000006318	rbm5	89	80.488	ENSACLG00000024198	RBM5	100	80.952	Astatotilapia_calliptera
ENSPLAG00000006318	rbm5	100	83.953	ENSACLG00000012748	rbm5	100	82.442	Astatotilapia_calliptera
ENSPLAG00000006318	rbm5	85	74.658	ENSAMXG00000008146	rbm5	100	74.760	Astyanax_mexicanus
ENSPLAG00000006318	rbm5	100	61.521	ENSBTAG00000006330	RBM5	100	60.644	Bos_taurus
ENSPLAG00000006318	rbm5	93	69.872	ENSCJAG00000004740	RBM5	100	63.793	Callithrix_jacchus
ENSPLAG00000006318	rbm5	100	61.866	ENSCAFG00000010866	RBM5	100	60.990	Canis_familiaris
ENSPLAG00000006318	rbm5	100	61.866	ENSCAFG00020022126	RBM5	100	60.990	Canis_lupus_dingo
ENSPLAG00000006318	rbm5	100	61.636	ENSCHIG00000018435	RBM5	100	60.759	Capra_hircus
ENSPLAG00000006318	rbm5	86	59.121	ENSTSYG00000004158	RBM5	100	58.644	Carlito_syrichta
ENSPLAG00000006318	rbm5	100	50.751	ENSCAPG00000013495	RBM5	100	49.942	Cavia_aperea
ENSPLAG00000006318	rbm5	100	61.680	ENSCPOG00000008151	RBM5	100	60.964	Cavia_porcellus
ENSPLAG00000006318	rbm5	99	61.645	ENSCCAG00000026401	RBM5	100	60.183	Cebus_capucinus
ENSPLAG00000006318	rbm5	100	61.866	ENSCATG00000041038	RBM5	100	60.990	Cercocebus_atys
ENSPLAG00000006318	rbm5	100	62.125	ENSCLAG00000007873	RBM5	100	61.194	Chinchilla_lanigera
ENSPLAG00000006318	rbm5	100	61.866	ENSCSAG00000014401	RBM5	100	60.990	Chlorocebus_sabaeus
ENSPLAG00000006318	rbm5	81	56.436	ENSCHOG00000009429	RBM5	85	55.807	Choloepus_hoffmanni
ENSPLAG00000006318	rbm5	92	62.547	ENSCPBG00000002406	RBM5	100	60.706	Chrysemys_picta_bellii
ENSPLAG00000006318	rbm5	100	61.117	ENSCANG00000031250	RBM5	100	60.184	Colobus_angolensis_palliatus
ENSPLAG00000006318	rbm5	100	61.866	ENSCGRG00001010543	Rbm5	100	60.990	Cricetulus_griseus_chok1gshd
ENSPLAG00000006318	rbm5	100	61.866	ENSCGRG00000008475	Rbm5	100	60.990	Cricetulus_griseus_crigri
ENSPLAG00000006318	rbm5	98	78.129	ENSCSEG00000000596	rbm5	97	78.271	Cynoglossus_semilaevis
ENSPLAG00000006318	rbm5	100	90.898	ENSCVAG00000005655	rbm5	100	90.898	Cyprinodon_variegatus
ENSPLAG00000006318	rbm5	100	61.460	ENSDARG00000098280	rbm5	100	68.301	Danio_rerio
ENSPLAG00000006318	rbm5	100	61.839	ENSDNOG00000011756	RBM5	100	60.850	Dasypus_novemcinctus
ENSPLAG00000006318	rbm5	100	62.156	ENSDORG00000007692	Rbm5	100	60.964	Dipodomys_ordii
ENSPLAG00000006318	rbm5	92	59.601	ENSETEG00000012773	RBM5	93	60.124	Echinops_telfairi
ENSPLAG00000006318	rbm5	78	59.008	ENSEBUG00000017034	rbm5	79	59.269	Eptatretus_burgeri
ENSPLAG00000006318	rbm5	100	61.866	ENSEASG00005011835	RBM5	100	60.990	Equus_asinus_asinus
ENSPLAG00000006318	rbm5	100	61.866	ENSECAG00000020447	RBM5	100	60.990	Equus_caballus
ENSPLAG00000006318	rbm5	86	73.077	ENSEEUG00000005943	RBM5	87	69.565	Erinaceus_europaeus
ENSPLAG00000006318	rbm5	100	75.258	ENSELUG00000022467	rbm5	100	72.862	Esox_lucius
ENSPLAG00000006318	rbm5	100	61.476	ENSFCAG00000014639	RBM5	100	60.759	Felis_catus
ENSPLAG00000006318	rbm5	99	60.319	ENSFALG00000008828	RBM5	83	63.412	Ficedula_albicollis
ENSPLAG00000006318	rbm5	100	62.457	ENSFDAG00000001897	RBM5	100	60.789	Fukomys_damarensis
ENSPLAG00000006318	rbm5	92	100.000	ENSFHEG00000015954	rbm5	100	100.000	Fundulus_heteroclitus
ENSPLAG00000006318	rbm5	99	71.860	ENSGMOG00000016224	rbm5	100	72.112	Gadus_morhua
ENSPLAG00000006318	rbm5	90	62.029	ENSGMOG00000007810	-	95	61.047	Gadus_morhua
ENSPLAG00000006318	rbm5	93	62.765	ENSGALG00000039288	RBM5	83	63.400	Gallus_gallus
ENSPLAG00000006318	rbm5	100	98.129	ENSGAFG00000010690	rbm5	100	98.129	Gambusia_affinis
ENSPLAG00000006318	rbm5	100	77.093	ENSGACG00000010469	rbm5	100	75.576	Gasterosteus_aculeatus
ENSPLAG00000006318	rbm5	100	63.356	ENSGACG00000000858	-	100	62.743	Gasterosteus_aculeatus
ENSPLAG00000006318	rbm5	87	61.457	ENSGAGG00000007935	RBM5	99	59.762	Gopherus_agassizii
ENSPLAG00000006318	rbm5	100	61.866	ENSGGOG00000014490	RBM5	100	60.990	Gorilla_gorilla
ENSPLAG00000006318	rbm5	100	84.144	ENSHBUG00000001941	rbm5	100	82.176	Haplochromis_burtoni
ENSPLAG00000006318	rbm5	89	80.488	ENSHBUG00000011901	-	100	80.952	Haplochromis_burtoni
ENSPLAG00000006318	rbm5	100	61.822	ENSHGLG00000014844	RBM5	100	60.894	Heterocephalus_glaber_female
ENSPLAG00000006318	rbm5	100	61.894	ENSHGLG00100010739	RBM5	100	60.964	Heterocephalus_glaber_male
ENSPLAG00000006318	rbm5	100	57.065	ENSHCOG00000004536	-	100	56.154	Hippocampus_comes
ENSPLAG00000006318	rbm5	96	74.939	ENSHCOG00000017110	rbm5	99	73.835	Hippocampus_comes
ENSPLAG00000006318	rbm5	100	73.903	ENSIPUG00000000640	rbm5	100	73.272	Ictalurus_punctatus
ENSPLAG00000006318	rbm5	100	61.468	ENSSTOG00000013856	RBM5	100	60.850	Ictidomys_tridecemlineatus
ENSPLAG00000006318	rbm5	100	61.812	ENSJJAG00000008844	Rbm5	100	60.825	Jaculus_jaculus
ENSPLAG00000006318	rbm5	100	85.366	ENSKMAG00000006663	rbm5	100	84.901	Kryptolebias_marmoratus
ENSPLAG00000006318	rbm5	100	81.702	ENSLBEG00000020858	rbm5	100	80.653	Labrus_bergylta
ENSPLAG00000006318	rbm5	100	62.933	ENSLBEG00000010877	-	94	62.125	Labrus_bergylta
ENSPLAG00000006318	rbm5	57	64.194	ENSLBEG00000002522	-	84	67.014	Labrus_bergylta
ENSPLAG00000006318	rbm5	100	70.328	ENSLOCG00000010774	rbm5	100	70.408	Lepisosteus_oculatus
ENSPLAG00000006318	rbm5	100	61.636	ENSLAFG00000006733	RBM5	100	60.686	Loxodonta_africana
ENSPLAG00000006318	rbm5	100	61.866	ENSMFAG00000031609	RBM5	100	60.990	Macaca_fascicularis
ENSPLAG00000006318	rbm5	99	61.761	ENSMMUG00000004921	RBM5	99	60.648	Macaca_mulatta
ENSPLAG00000006318	rbm5	100	61.982	ENSMNEG00000044394	RBM5	100	61.105	Macaca_nemestrina
ENSPLAG00000006318	rbm5	100	60.578	ENSMLEG00000034689	RBM5	100	59.611	Mandrillus_leucophaeus
ENSPLAG00000006318	rbm5	100	66.897	ENSMAMG00000023948	-	100	61.565	Mastacembelus_armatus
ENSPLAG00000006318	rbm5	91	97.619	ENSMAMG00000017277	rbm5	99	97.619	Mastacembelus_armatus
ENSPLAG00000006318	rbm5	100	61.714	ENSMZEG00005010035	-	100	62.069	Maylandia_zebra
ENSPLAG00000006318	rbm5	100	83.953	ENSMZEG00005015328	rbm5	100	82.442	Maylandia_zebra
ENSPLAG00000006318	rbm5	93	62.889	ENSMGAG00000003972	RBM5	100	63.466	Meleagris_gallopavo
ENSPLAG00000006318	rbm5	99	61.387	ENSMAUG00000020572	Rbm5	98	60.508	Mesocricetus_auratus
ENSPLAG00000006318	rbm5	100	61.938	ENSMICG00000016179	RBM5	100	60.875	Microcebus_murinus
ENSPLAG00000006318	rbm5	100	61.751	ENSMOCG00000017479	Rbm5	100	60.875	Microtus_ochrogaster
ENSPLAG00000006318	rbm5	90	62.698	ENSMMOG00000021804	-	99	52.260	Mola_mola
ENSPLAG00000006318	rbm5	97	85.629	ENSMMOG00000015342	rbm5	93	84.940	Mola_mola
ENSPLAG00000006318	rbm5	100	60.599	ENSMODG00000012301	RBM5	100	60.554	Monodelphis_domestica
ENSPLAG00000006318	rbm5	99	72.643	ENSMALG00000000609	rbm5	99	72.538	Monopterus_albus
ENSPLAG00000006318	rbm5	100	64.665	ENSMALG00000016769	-	100	64.162	Monopterus_albus
ENSPLAG00000006318	rbm5	100	61.371	MGP_CAROLIEiJ_G0032660	Rbm5	100	63.281	Mus_caroli
ENSPLAG00000006318	rbm5	100	61.486	ENSMUSG00000032580	Rbm5	100	63.281	Mus_musculus
ENSPLAG00000006318	rbm5	100	61.486	MGP_PahariEiJ_G0015528	Rbm5	100	62.109	Mus_pahari
ENSPLAG00000006318	rbm5	100	61.486	MGP_SPRETEiJ_G0033805	Rbm5	96	67.114	Mus_spretus
ENSPLAG00000006318	rbm5	100	61.636	ENSMLUG00000007875	RBM5	100	61.724	Myotis_lucifugus
ENSPLAG00000006318	rbm5	100	61.361	ENSNGAG00000011777	Rbm5	100	60.850	Nannospalax_galili
ENSPLAG00000006318	rbm5	100	84.259	ENSNBRG00000018097	rbm5	100	82.292	Neolamprologus_brichardi
ENSPLAG00000006318	rbm5	98	58.968	ENSNBRG00000004400	RBM5	95	60.636	Neolamprologus_brichardi
ENSPLAG00000006318	rbm5	100	61.866	ENSNLEG00000006943	RBM5	100	60.990	Nomascus_leucogenys
ENSPLAG00000006318	rbm5	99	56.381	ENSMEUG00000012994	RBM5	100	56.446	Notamacropus_eugenii
ENSPLAG00000006318	rbm5	92	60.602	ENSOPRG00000015154	RBM5	93	60.075	Ochotona_princeps
ENSPLAG00000006318	rbm5	100	61.778	ENSODEG00000016254	-	100	60.850	Octodon_degus
ENSPLAG00000006318	rbm5	100	59.629	ENSODEG00000019111	-	100	58.992	Octodon_degus
ENSPLAG00000006318	rbm5	100	84.259	ENSONIG00000004107	rbm5	100	82.292	Oreochromis_niloticus
ENSPLAG00000006318	rbm5	100	63.043	ENSONIG00000019007	RBM5	100	63.406	Oreochromis_niloticus
ENSPLAG00000006318	rbm5	88	61.811	ENSOANG00000006557	RBM5	100	60.892	Ornithorhynchus_anatinus
ENSPLAG00000006318	rbm5	100	61.592	ENSOCUG00000011652	RBM5	100	60.529	Oryctolagus_cuniculus
ENSPLAG00000006318	rbm5	95	84.493	ENSORLG00000003369	rbm5	99	83.171	Oryzias_latipes
ENSPLAG00000006318	rbm5	100	57.683	ENSORLG00000001053	-	100	56.300	Oryzias_latipes
ENSPLAG00000006318	rbm5	100	84.517	ENSORLG00020021744	rbm5	100	83.256	Oryzias_latipes_hni
ENSPLAG00000006318	rbm5	96	56.517	ENSORLG00020006782	-	98	55.701	Oryzias_latipes_hni
ENSPLAG00000006318	rbm5	91	97.619	ENSORLG00015018379	rbm5	99	97.619	Oryzias_latipes_hsok
ENSPLAG00000006318	rbm5	96	56.280	ENSORLG00015002854	-	98	55.344	Oryzias_latipes_hsok
ENSPLAG00000006318	rbm5	100	84.437	ENSOMEG00000002219	rbm5	100	84.437	Oryzias_melastigma
ENSPLAG00000006318	rbm5	66	67.708	ENSOMEG00000010653	-	89	67.708	Oryzias_melastigma
ENSPLAG00000006318	rbm5	93	61.644	ENSOGAG00000004205	RBM5	100	61.242	Otolemur_garnettii
ENSPLAG00000006318	rbm5	100	61.636	ENSOARG00000010923	RBM5	100	60.759	Ovis_aries
ENSPLAG00000006318	rbm5	100	61.866	ENSPPAG00000043010	RBM5	100	60.990	Pan_paniscus
ENSPLAG00000006318	rbm5	100	61.476	ENSPPRG00000005404	RBM5	100	60.759	Panthera_pardus
ENSPLAG00000006318	rbm5	100	61.476	ENSPTIG00000000962	RBM5	100	60.759	Panthera_tigris_altaica
ENSPLAG00000006318	rbm5	100	61.866	ENSPTRG00000014946	RBM5	100	60.990	Pan_troglodytes
ENSPLAG00000006318	rbm5	100	61.866	ENSPANG00000018507	RBM5	100	60.990	Papio_anubis
ENSPLAG00000006318	rbm5	77	56.567	ENSPKIG00000019187	-	100	56.148	Paramormyrops_kingsleyae
ENSPLAG00000006318	rbm5	100	69.807	ENSPKIG00000024837	RBM5	100	68.871	Paramormyrops_kingsleyae
ENSPLAG00000006318	rbm5	88	61.792	ENSPSIG00000016073	RBM5	100	62.435	Pelodiscus_sinensis
ENSPLAG00000006318	rbm5	79	61.877	ENSPMGG00000017347	rbm5	100	61.752	Periophthalmus_magnuspinnatus
ENSPLAG00000006318	rbm5	88	84.615	ENSPMGG00000004719	-	99	83.333	Periophthalmus_magnuspinnatus
ENSPLAG00000006318	rbm5	99	44.883	ENSPMAG00000001998	rbm5	92	46.039	Petromyzon_marinus
ENSPLAG00000006318	rbm5	100	60.599	ENSPCIG00000021531	RBM5	100	60.669	Phascolarctos_cinereus
ENSPLAG00000006318	rbm5	100	99.181	ENSPMEG00000004295	rbm5	100	99.181	Poecilia_mexicana
ENSPLAG00000006318	rbm5	75	81.975	ENSPMEG00000008651	rbm5	100	82.132	Poecilia_mexicana
ENSPLAG00000006318	rbm5	100	98.363	ENSPREG00000003795	rbm5	100	98.363	Poecilia_reticulata
ENSPLAG00000006318	rbm5	62	60.606	ENSPCAG00000005459	RBM5	73	60.435	Procavia_capensis
ENSPLAG00000006318	rbm5	100	61.592	ENSPCOG00000025840	RBM5	100	60.759	Propithecus_coquereli
ENSPLAG00000006318	rbm5	100	58.763	ENSPVAG00000006812	RBM5	100	58.238	Pteropus_vampyrus
ENSPLAG00000006318	rbm5	84	63.624	ENSPNYG00000006361	RBM5	99	63.374	Pundamilia_nyererei
ENSPLAG00000006318	rbm5	100	84.259	ENSPNYG00000014787	rbm5	100	82.292	Pundamilia_nyererei
ENSPLAG00000006318	rbm5	100	73.763	ENSPNAG00000012070	rbm5	100	73.848	Pygocentrus_nattereri
ENSPLAG00000006318	rbm5	100	61.327	ENSRNOG00000018153	Rbm5	100	60.735	Rattus_norvegicus
ENSPLAG00000006318	rbm5	100	61.982	ENSRBIG00000012679	RBM5	100	61.105	Rhinopithecus_bieti
ENSPLAG00000006318	rbm5	100	62.384	ENSRROG00000041331	RBM5	100	61.182	Rhinopithecus_roxellana
ENSPLAG00000006318	rbm5	100	61.751	ENSSBOG00000006324	RBM5	100	60.990	Saimiri_boliviensis_boliviensis
ENSPLAG00000006318	rbm5	100	61.040	ENSSHAG00000018260	RBM5	100	60.438	Sarcophilus_harrisii
ENSPLAG00000006318	rbm5	100	73.095	ENSSFOG00015019052	rbm5	94	72.601	Scleropages_formosus
ENSPLAG00000006318	rbm5	99	73.243	ENSSFOG00015019645	-	99	73.514	Scleropages_formosus
ENSPLAG00000006318	rbm5	100	81.185	ENSSMAG00000017106	rbm5	100	80.488	Scophthalmus_maximus
ENSPLAG00000006318	rbm5	100	82.811	ENSSDUG00000019775	rbm5	100	82.346	Seriola_dumerili
ENSPLAG00000006318	rbm5	100	82.927	ENSSLDG00000002329	rbm5	100	82.462	Seriola_lalandi_dorsalis
ENSPLAG00000006318	rbm5	100	65.143	ENSSLDG00000015996	-	100	65.143	Seriola_lalandi_dorsalis
ENSPLAG00000006318	rbm5	57	79.221	ENSSARG00000009724	-	63	76.623	Sorex_araneus
ENSPLAG00000006318	rbm5	100	57.097	ENSSPUG00000001876	RBM5	86	60.337	Sphenodon_punctatus
ENSPLAG00000006318	rbm5	100	84.266	ENSSPAG00000019638	rbm5	100	83.450	Stegastes_partitus
ENSPLAG00000006318	rbm5	100	66.513	ENSSPAG00000020011	-	100	65.823	Stegastes_partitus
ENSPLAG00000006318	rbm5	92	73.810	ENSSSCG00000011395	RBM5	100	73.810	Sus_scrofa
ENSPLAG00000006318	rbm5	93	56.211	ENSTGUG00000006417	RBM5	98	58.962	Taeniopygia_guttata
ENSPLAG00000006318	rbm5	100	79.722	ENSTRUG00000008292	rbm5	100	82.011	Takifugu_rubripes
ENSPLAG00000006318	rbm5	85	77.739	ENSTNIG00000014742	rbm5	93	76.678	Tetraodon_nigroviridis
ENSPLAG00000006318	rbm5	100	55.581	ENSTBEG00000005424	RBM5	100	54.713	Tupaia_belangeri
ENSPLAG00000006318	rbm5	92	57.591	ENSTTRG00000007717	RBM5	100	56.078	Tursiops_truncatus
ENSPLAG00000006318	rbm5	100	61.751	ENSUAMG00000028347	RBM5	100	60.875	Ursus_americanus
ENSPLAG00000006318	rbm5	100	61.751	ENSUMAG00000022027	RBM5	100	63.793	Ursus_maritimus
ENSPLAG00000006318	rbm5	90	59.415	ENSVPAG00000009388	RBM5	97	59.008	Vicugna_pacos
ENSPLAG00000006318	rbm5	100	61.866	ENSVVUG00000028647	RBM5	100	60.990	Vulpes_vulpes
ENSPLAG00000006318	rbm5	100	98.363	ENSXMAG00000016369	rbm5	100	98.363	Xiphophorus_maculatus