EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000006395 (Gene tree)
Gene ID: 106959228
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 10987 bases
Position: chrKQ546372.1:118754-129740
Accession: 106959228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000022117	RNA_bind	PF08675.11	1.5e-33	1	1
ENSPLAP00000022117	CAF1	PF04857.20	3.2e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009266	-	3863	XM_015051655	ENSPLAP00000022117	683 (aa)	XP_014907141	UPI00072EC389

Gene Model

Click here to download ENSPLAG00000006395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006395	parn	84	73.064	ENSG00000140694	PARN	91	79.661	Homo_sapiens
ENSPLAG00000006395	parn	78	77.467	ENSAMEG00000011208	PARN	83	77.467	Ailuropoda_melanoleuca
ENSPLAG00000006395	parn	87	79.251	ENSACIG00000000619	parn	100	79.251	Amphilophus_citrinellus
ENSPLAG00000006395	parn	100	83.454	ENSAOCG00000003465	parn	100	83.454	Amphiprion_ocellaris
ENSPLAG00000006395	parn	73	88.377	ENSAPEG00000010661	parn	95	88.377	Amphiprion_percula
ENSPLAG00000006395	parn	100	83.965	ENSATEG00000004661	parn	100	84.548	Anabas_testudineus
ENSPLAG00000006395	parn	83	72.260	ENSAPLG00000013914	PARN	89	73.171	Anas_platyrhynchos
ENSPLAG00000006395	parn	84	73.534	ENSACAG00000004973	PARN	89	74.276	Anolis_carolinensis
ENSPLAG00000006395	parn	84	72.727	ENSANAG00000031516	PARN	91	79.661	Aotus_nancymaae
ENSPLAG00000006395	parn	100	84.818	ENSACLG00000004742	parn	100	85.255	Astatotilapia_calliptera
ENSPLAG00000006395	parn	100	70.203	ENSAMXG00000012390	parn	97	73.993	Astyanax_mexicanus
ENSPLAG00000006395	parn	84	70.270	ENSBTAG00000018097	PARN	89	73.129	Bos_taurus
ENSPLAG00000006395	parn	84	72.896	ENSCJAG00000015866	PARN	91	79.661	Callithrix_jacchus
ENSPLAG00000006395	parn	78	77.052	ENSCAFG00000018795	PARN	83	77.052	Canis_familiaris
ENSPLAG00000006395	parn	78	77.239	ENSCAFG00020024126	PARN	83	77.239	Canis_lupus_dingo
ENSPLAG00000006395	parn	84	72.804	ENSCHIG00000018143	PARN	90	73.711	Capra_hircus
ENSPLAG00000006395	parn	69	51.351	ENSCAPG00000007984	PARN	78	51.351	Cavia_aperea
ENSPLAG00000006395	parn	84	71.669	ENSCPOG00000002263	PARN	91	72.556	Cavia_porcellus
ENSPLAG00000006395	parn	84	72.896	ENSCCAG00000030367	PARN	91	79.661	Cebus_capucinus
ENSPLAG00000006395	parn	78	77.612	ENSCATG00000041368	PARN	95	77.612	Cercocebus_atys
ENSPLAG00000006395	parn	84	73.311	ENSCLAG00000015406	PARN	90	74.138	Chinchilla_lanigera
ENSPLAG00000006395	parn	84	72.896	ENSCSAG00000008142	PARN	83	77.985	Chlorocebus_sabaeus
ENSPLAG00000006395	parn	82	56.822	ENSCHOG00000007014	PARN	90	56.969	Choloepus_hoffmanni
ENSPLAG00000006395	parn	74	73.282	ENSCPBG00000006609	PARN	89	73.410	Chrysemys_picta_bellii
ENSPLAG00000006395	parn	75	40.824	ENSCING00000010142	-	99	40.824	Ciona_intestinalis
ENSPLAG00000006395	parn	84	62.273	ENSCANG00000028849	-	76	79.661	Colobus_angolensis_palliatus
ENSPLAG00000006395	parn	83	73.356	ENSCGRG00001012096	Parn	84	76.679	Cricetulus_griseus_chok1gshd
ENSPLAG00000006395	parn	83	73.356	ENSCGRG00000004939	Parn	84	76.679	Cricetulus_griseus_crigri
ENSPLAG00000006395	parn	100	78.894	ENSCSEG00000002064	parn	100	78.894	Cynoglossus_semilaevis
ENSPLAG00000006395	parn	100	90.922	ENSCVAG00000014848	parn	100	90.922	Cyprinodon_variegatus
ENSPLAG00000006395	parn	100	66.427	ENSDARG00000102634	parn	100	67.593	Danio_rerio
ENSPLAG00000006395	parn	84	72.589	ENSDNOG00000000833	PARN	94	77.612	Dasypus_novemcinctus
ENSPLAG00000006395	parn	61	74.242	ENSETEG00000014828	-	69	74.242	Echinops_telfairi
ENSPLAG00000006395	parn	83	73.070	ENSEASG00005011400	PARN	90	73.150	Equus_asinus_asinus
ENSPLAG00000006395	parn	83	72.899	ENSECAG00000017792	PARN	90	72.978	Equus_caballus
ENSPLAG00000006395	parn	71	63.514	ENSEEUG00000010370	PARN	70	63.514	Erinaceus_europaeus
ENSPLAG00000006395	parn	100	73.547	ENSELUG00000013139	parn	90	73.362	Esox_lucius
ENSPLAG00000006395	parn	84	71.980	ENSFCAG00000044961	PARN	83	77.985	Felis_catus
ENSPLAG00000006395	parn	83	72.355	ENSFALG00000003911	PARN	98	64.254	Ficedula_albicollis
ENSPLAG00000006395	parn	84	72.491	ENSFDAG00000009234	PARN	90	73.793	Fukomys_damarensis
ENSPLAG00000006395	parn	87	86.723	ENSFHEG00000013738	parn	92	96.610	Fundulus_heteroclitus
ENSPLAG00000006395	parn	81	82.759	ENSGMOG00000003231	parn	99	82.759	Gadus_morhua
ENSPLAG00000006395	parn	90	68.594	ENSGALG00000003091	PARN	84	77.052	Gallus_gallus
ENSPLAG00000006395	parn	100	97.372	ENSGAFG00000011061	parn	100	97.372	Gambusia_affinis
ENSPLAG00000006395	parn	84	83.045	ENSGACG00000019501	parn	100	74.674	Gasterosteus_aculeatus
ENSPLAG00000006395	parn	84	73.064	ENSGGOG00000025224	PARN	91	79.661	Gorilla_gorilla
ENSPLAG00000006395	parn	100	85.401	ENSHBUG00000017906	parn	100	85.401	Haplochromis_burtoni
ENSPLAG00000006395	parn	84	72.804	ENSHGLG00000010886	PARN	91	73.242	Heterocephalus_glaber_female
ENSPLAG00000006395	parn	84	72.804	ENSHGLG00100014659	PARN	91	73.242	Heterocephalus_glaber_male
ENSPLAG00000006395	parn	81	80.364	ENSHCOG00000008683	parn	95	80.364	Hippocampus_comes
ENSPLAG00000006395	parn	100	59.797	ENSIPUG00000012401	parn	100	59.712	Ictalurus_punctatus
ENSPLAG00000006395	parn	83	72.696	ENSSTOG00000007519	PARN	91	72.696	Ictidomys_tridecemlineatus
ENSPLAG00000006395	parn	84	72.526	ENSJJAG00000023049	Parn	90	73.090	Jaculus_jaculus
ENSPLAG00000006395	parn	100	86.823	ENSKMAG00000009462	parn	100	86.091	Kryptolebias_marmoratus
ENSPLAG00000006395	parn	93	84.326	ENSLBEG00000009167	parn	99	84.326	Labrus_bergylta
ENSPLAG00000006395	parn	73	74.008	ENSLACG00000004207	PARN	100	72.877	Latimeria_chalumnae
ENSPLAG00000006395	parn	100	68.723	ENSLOCG00000000715	parn	100	68.580	Lepisosteus_oculatus
ENSPLAG00000006395	parn	84	73.413	ENSLAFG00000015036	PARN	90	74.171	Loxodonta_africana
ENSPLAG00000006395	parn	84	69.529	ENSMFAG00000044852	PARN	89	72.658	Macaca_fascicularis
ENSPLAG00000006395	parn	84	72.727	ENSMMUG00000018849	PARN	83	77.799	Macaca_mulatta
ENSPLAG00000006395	parn	84	72.896	ENSMNEG00000045108	PARN	83	77.985	Macaca_nemestrina
ENSPLAG00000006395	parn	84	72.727	ENSMLEG00000031743	PARN	83	77.799	Mandrillus_leucophaeus
ENSPLAG00000006395	parn	100	83.843	ENSMAMG00000006939	parn	100	83.697	Mastacembelus_armatus
ENSPLAG00000006395	parn	100	84.818	ENSMZEG00005013590	parn	100	85.255	Maylandia_zebra
ENSPLAG00000006395	parn	82	70.537	ENSMGAG00000001004	PARN	82	74.811	Meleagris_gallopavo
ENSPLAG00000006395	parn	83	67.462	ENSMAUG00000008025	Parn	90	67.698	Mesocricetus_auratus
ENSPLAG00000006395	parn	84	72.559	ENSMICG00000016053	PARN	91	77.966	Microcebus_murinus
ENSPLAG00000006395	parn	72	78.586	ENSMOCG00000022211	Parn	100	78.586	Microtus_ochrogaster
ENSPLAG00000006395	parn	81	85.895	ENSMMOG00000011333	parn	90	85.895	Mola_mola
ENSPLAG00000006395	parn	72	80.684	ENSMODG00000004915	PARN	99	80.684	Monodelphis_domestica
ENSPLAG00000006395	parn	96	84.018	ENSMALG00000019426	parn	94	88.809	Monopterus_albus
ENSPLAG00000006395	parn	83	72.461	MGP_CAROLIEiJ_G0020466	Parn	90	72.474	Mus_caroli
ENSPLAG00000006395	parn	83	72.289	ENSMUSG00000022685	Parn	100	74.390	Mus_musculus
ENSPLAG00000006395	parn	82	72.822	MGP_PahariEiJ_G0016172	Parn	90	72.822	Mus_pahari
ENSPLAG00000006395	parn	83	72.633	MGP_SPRETEiJ_G0021361	Parn	89	73.427	Mus_spretus
ENSPLAG00000006395	parn	84	72.081	ENSMPUG00000014464	PARN	90	73.150	Mustela_putorius_furo
ENSPLAG00000006395	parn	72	77.778	ENSMLUG00000005414	PARN	100	77.778	Myotis_lucifugus
ENSPLAG00000006395	parn	81	88.427	ENSNBRG00000006805	parn	93	88.427	Neolamprologus_brichardi
ENSPLAG00000006395	parn	84	73.064	ENSNLEG00000010241	PARN	91	79.661	Nomascus_leucogenys
ENSPLAG00000006395	parn	69	65.000	ENSMEUG00000008178	-	74	65.000	Notamacropus_eugenii
ENSPLAG00000006395	parn	82	68.221	ENSOPRG00000012187	PARN	90	68.467	Ochotona_princeps
ENSPLAG00000006395	parn	84	68.048	ENSODEG00000001617	PARN	90	68.893	Octodon_degus
ENSPLAG00000006395	parn	100	85.401	ENSONIG00000000151	parn	100	85.401	Oreochromis_niloticus
ENSPLAG00000006395	parn	83	72.479	ENSOCUG00000000322	PARN	90	73.217	Oryctolagus_cuniculus
ENSPLAG00000006395	parn	100	81.579	ENSORLG00020010313	parn	100	82.018	Oryzias_latipes_hni
ENSPLAG00000006395	parn	100	81.725	ENSORLG00015000300	parn	100	82.164	Oryzias_latipes_hsok
ENSPLAG00000006395	parn	100	80.876	ENSOMEG00000019555	parn	100	80.876	Oryzias_melastigma
ENSPLAG00000006395	parn	72	77.823	ENSOGAG00000014626	PARN	100	77.823	Otolemur_garnettii
ENSPLAG00000006395	parn	72	79.798	ENSOARG00000007574	PARN	100	79.798	Ovis_aries
ENSPLAG00000006395	parn	84	72.896	ENSPPAG00000031438	PARN	91	79.661	Pan_paniscus
ENSPLAG00000006395	parn	84	71.980	ENSPPRG00000018583	PARN	83	77.985	Panthera_pardus
ENSPLAG00000006395	parn	84	71.980	ENSPTIG00000012135	PARN	83	77.985	Panthera_tigris_altaica
ENSPLAG00000006395	parn	84	72.896	ENSPTRG00000007792	PARN	91	79.661	Pan_troglodytes
ENSPLAG00000006395	parn	84	70.370	ENSPANG00000020099	PARN	83	75.000	Papio_anubis
ENSPLAG00000006395	parn	99	68.137	ENSPKIG00000022807	parn	96	67.236	Paramormyrops_kingsleyae
ENSPLAG00000006395	parn	83	73.514	ENSPSIG00000014804	PARN	90	73.801	Pelodiscus_sinensis
ENSPLAG00000006395	parn	90	76.098	ENSPMGG00000014431	parn	85	76.423	Periophthalmus_magnuspinnatus
ENSPLAG00000006395	parn	83	71.231	ENSPEMG00000018439	Parn	90	71.503	Peromyscus_maniculatus_bairdii
ENSPLAG00000006395	parn	76	68.786	ENSPMAG00000003956	parn	98	68.786	Petromyzon_marinus
ENSPLAG00000006395	parn	62	72.170	ENSPCIG00000001259	PARN	91	79.661	Phascolarctos_cinereus
ENSPLAG00000006395	parn	100	99.707	ENSPFOG00000012823	parn	100	99.707	Poecilia_formosa
ENSPLAG00000006395	parn	100	99.122	ENSPMEG00000007711	parn	100	99.122	Poecilia_mexicana
ENSPLAG00000006395	parn	100	98.829	ENSPREG00000000147	parn	100	98.829	Poecilia_reticulata
ENSPLAG00000006395	parn	84	72.483	ENSPPYG00000007123	PARN	83	77.509	Pongo_abelii
ENSPLAG00000006395	parn	79	62.679	ENSPCAG00000001741	PARN	82	67.396	Procavia_capensis
ENSPLAG00000006395	parn	84	69.748	ENSPCOG00000019292	PARN	91	77.966	Propithecus_coquereli
ENSPLAG00000006395	parn	83	69.231	ENSPVAG00000002547	PARN	83	74.480	Pteropus_vampyrus
ENSPLAG00000006395	parn	100	85.109	ENSPNYG00000006835	parn	100	85.109	Pundamilia_nyererei
ENSPLAG00000006395	parn	93	69.626	ENSPNAG00000018905	parn	100	69.626	Pygocentrus_nattereri
ENSPLAG00000006395	parn	83	72.978	ENSRNOG00000002912	Parn	96	77.551	Rattus_norvegicus
ENSPLAG00000006395	parn	84	71.044	ENSSBOG00000034726	PARN	83	75.933	Saimiri_boliviensis_boliviensis
ENSPLAG00000006395	parn	61	79.187	ENSSHAG00000008493	PARN	93	79.187	Sarcophilus_harrisii
ENSPLAG00000006395	parn	100	68.759	ENSSFOG00015014165	parn	98	72.500	Scleropages_formosus
ENSPLAG00000006395	parn	100	80.687	ENSSMAG00000000685	parn	100	80.687	Scophthalmus_maximus
ENSPLAG00000006395	parn	100	84.738	ENSSDUG00000014555	parn	100	85.174	Seriola_dumerili
ENSPLAG00000006395	parn	64	79.540	ENSSARG00000014339	PARN	75	79.540	Sorex_araneus
ENSPLAG00000006395	parn	84	72.712	ENSSPUG00000007719	PARN	90	73.276	Sphenodon_punctatus
ENSPLAG00000006395	parn	100	85.693	ENSSPAG00000007095	parn	100	85.693	Stegastes_partitus
ENSPLAG00000006395	parn	83	73.276	ENSSSCG00000007878	PARN	80	73.276	Sus_scrofa
ENSPLAG00000006395	parn	85	70.813	ENSTGUG00000004971	PARN	82	77.358	Taeniopygia_guttata
ENSPLAG00000006395	parn	83	85.439	ENSTNIG00000008252	parn	100	74.709	Tetraodon_nigroviridis
ENSPLAG00000006395	parn	75	61.423	ENSTBEG00000010407	PARN	89	62.069	Tupaia_belangeri
ENSPLAG00000006395	parn	71	78.850	ENSTTRG00000002843	PARN	77	78.850	Tursiops_truncatus
ENSPLAG00000006395	parn	64	69.565	ENSUAMG00000008283	PARN	94	65.904	Ursus_americanus
ENSPLAG00000006395	parn	78	77.985	ENSUMAG00000004527	PARN	83	77.985	Ursus_maritimus
ENSPLAG00000006395	parn	83	69.506	ENSVPAG00000008968	PARN	93	70.364	Vicugna_pacos
ENSPLAG00000006395	parn	78	77.425	ENSVVUG00000019509	PARN	83	77.425	Vulpes_vulpes
ENSPLAG00000006395	parn	78	74.906	ENSXETG00000010994	parn	100	74.906	Xenopus_tropicalis
ENSPLAG00000006395	parn	87	91.779	ENSXCOG00000015990	parn	100	91.779	Xiphophorus_couchianus
ENSPLAG00000006395	parn	100	96.925	ENSXMAG00000014783	parn	100	96.925	Xiphophorus_maculatus