EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000006473 (Gene tree)
Gene ID: 106963916
Gene Symbol: -
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 57462 bases
Position: chrKQ546911.1:50140-107601
Accession: 106963916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004701	ResIII	PF04851.15	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009180	-	2934	XM_015059093	ENSPLAP00000004701	977 (aa)	XP_014914579	-

Gene Model

Click here to download ENSPLAG00000006473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006473	-	85	77.765	ENSG00000153922	CHD1	50	76.533	Homo_sapiens
ENSPLAG00000006473	-	64	93.910	ENSAPOG00000005764	chd1	53	93.910	Acanthochromis_polyacanthus
ENSPLAG00000006473	-	88	83.852	ENSATEG00000010676	chd1	51	83.871	Anabas_testudineus
ENSPLAG00000006473	-	72	88.269	ENSAMXG00000010843	chd1	57	84.480	Astyanax_mexicanus
ENSPLAG00000006473	-	85	77.962	ENSCATG00000032035	CHD1	50	77.844	Cercocebus_atys
ENSPLAG00000006473	-	85	77.962	ENSCSAG00000015339	CHD1	50	76.588	Chlorocebus_sabaeus
ENSPLAG00000006473	-	85	78.029	ENSCANG00000036916	CHD1	51	77.580	Colobus_angolensis_palliatus
ENSPLAG00000006473	-	85	76.485	ENSEASG00005016110	CHD1	60	76.415	Equus_asinus_asinus
ENSPLAG00000006473	-	81	86.301	ENSFHEG00000021164	chd1	52	95.091	Fundulus_heteroclitus
ENSPLAG00000006473	-	82	98.907	ENSGAFG00000019880	chd1	51	98.907	Gambusia_affinis
ENSPLAG00000006473	-	85	77.765	ENSGGOG00000011463	CHD1	50	76.533	Gorilla_gorilla
ENSPLAG00000006473	-	85	75.895	ENSLAFG00000023183	CHD1	78	74.408	Loxodonta_africana
ENSPLAG00000006473	-	85	77.962	ENSMFAG00000031226	CHD1	50	77.844	Macaca_fascicularis
ENSPLAG00000006473	-	85	77.568	ENSMMUG00000014090	CHD1	60	76.588	Macaca_mulatta
ENSPLAG00000006473	-	85	77.924	ENSMNEG00000045073	CHD1	50	77.844	Macaca_nemestrina
ENSPLAG00000006473	-	73	90.476	ENSMZEG00005010957	chd1	54	90.476	Maylandia_zebra
ENSPLAG00000006473	-	59	69.915	ENSMGAG00000008369	-	75	69.728	Meleagris_gallopavo
ENSPLAG00000006473	-	85	77.592	ENSMOCG00000019121	Chd1	50	77.041	Microtus_ochrogaster
ENSPLAG00000006473	-	77	80.397	ENSMODG00000019266	-	96	82.216	Monodelphis_domestica
ENSPLAG00000006473	-	85	87.544	ENSMALG00000013317	chd1	59	86.223	Monopterus_albus
ENSPLAG00000006473	-	85	76.877	MGP_CAROLIEiJ_G0021099	Chd1	78	75.858	Mus_caroli
ENSPLAG00000006473	-	85	76.841	ENSMUSG00000023852	Chd1	78	76.095	Mus_musculus
ENSPLAG00000006473	-	85	76.841	MGP_PahariEiJ_G0023414	Chd1	78	75.976	Mus_pahari
ENSPLAG00000006473	-	85	77.765	ENSNLEG00000014493	CHD1	50	76.533	Nomascus_leucogenys
ENSPLAG00000006473	-	85	83.493	ENSORLG00015016725	chd1	78	83.652	Oryzias_latipes_hsok
ENSPLAG00000006473	-	85	77.289	ENSPPAG00000043367	CHD1	50	76.061	Pan_paniscus
ENSPLAG00000006473	-	85	77.765	ENSPTRG00000017103	CHD1	50	76.533	Pan_troglodytes
ENSPLAG00000006473	-	85	77.962	ENSPANG00000006387	CHD1	50	77.844	Papio_anubis
ENSPLAG00000006473	-	75	88.331	ENSPMGG00000005785	chd1	55	88.347	Periophthalmus_magnuspinnatus
ENSPLAG00000006473	-	84	78.193	ENSPEMG00000015939	Chd1	50	76.241	Peromyscus_maniculatus_bairdii
ENSPLAG00000006473	-	89	98.622	ENSPREG00000004209	chd1	53	98.622	Poecilia_reticulata
ENSPLAG00000006473	-	85	77.354	ENSRNOG00000014434	Chd1	59	76.686	Rattus_norvegicus
ENSPLAG00000006473	-	85	78.055	ENSRBIG00000044325	CHD1	50	77.672	Rhinopithecus_bieti
ENSPLAG00000006473	-	85	78.055	ENSRROG00000001726	CHD1	50	77.672	Rhinopithecus_roxellana
ENSPLAG00000006473	-	73	83.613	ENSSFOG00015007161	chd1	53	83.590	Scleropages_formosus
ENSPLAG00000006473	-	85	86.342	ENSSDUG00000018314	chd1	59	84.515	Seriola_dumerili
ENSPLAG00000006473	-	73	90.336	ENSSLDG00000017244	chd1	71	90.336	Seriola_lalandi_dorsalis
ENSPLAG00000006473	-	85	86.580	ENSSPAG00000007024	chd1	59	88.507	Stegastes_partitus
ENSPLAG00000006473	-	85	78.121	ENSSSCG00000014177	CHD1	57	78.318	Sus_scrofa
ENSPLAG00000006473	-	85	83.413	ENSTRUG00000010282	chd1	50	83.373	Takifugu_rubripes
ENSPLAG00000006473	-	85	83.914	ENSTNIG00000007101	chd1	65	84.330	Tetraodon_nigroviridis
ENSPLAG00000006473	-	89	99.082	ENSXMAG00000014538	chd1	64	99.082	Xiphophorus_maculatus