EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006480 (Gene tree)
Gene ID: 106960849
Gene Symbol: srsf5b
Alias: -
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6900 bases
Position: chrKQ545370.1:463802-470701
Accession: 106960849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004727	RRM_1	PF00076.22	5.2e-32	1	2
ENSPLAP00000004727	RRM_1	PF00076.22	5.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009147	-	2065	XM_015054204	ENSPLAP00000004727	302 (aa)	XP_014909690	UPI00072E425D

Gene Model

Click here to download ENSPLAG00000006480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006480	srsf5b	61	67.725	ENSPLAG00000005508	srsf5a	83	55.474
ENSPLAG00000006480	srsf5b	60	43.243	ENSPLAG00000019553	-	80	41.758
ENSPLAG00000006480	srsf5b	60	62.983	ENSPLAG00000009243	srsf6a	78	54.348
ENSPLAG00000006480	srsf5b	58	41.989	ENSPLAG00000022740	srsf9	68	41.989
ENSPLAG00000006480	srsf5b	76	56.846	ENSPLAG00000008812	srsf4	82	48.473
ENSPLAG00000006480	srsf5b	60	43.243	ENSPLAG00000019613	-	63	43.575
ENSPLAG00000006480	srsf5b	57	48.315	ENSPLAG00000008416	srsf1b	94	41.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006480	srsf5b	89	93.704	ENSAPOG00000008642	srsf5b	92	93.704	Acanthochromis_polyacanthus
ENSPLAG00000006480	srsf5b	100	90.759	ENSACIG00000010742	srsf5b	92	93.704	Amphilophus_citrinellus
ENSPLAG00000006480	srsf5b	89	93.333	ENSAOCG00000005719	srsf5b	92	93.333	Amphiprion_ocellaris
ENSPLAG00000006480	srsf5b	89	93.333	ENSAPEG00000007830	srsf5b	92	93.333	Amphiprion_percula
ENSPLAG00000006480	srsf5b	89	92.222	ENSATEG00000019112	srsf5b	92	91.481	Anabas_testudineus
ENSPLAG00000006480	srsf5b	63	81.675	ENSAPLG00000014681	SRSF5	96	68.794	Anas_platyrhynchos
ENSPLAG00000006480	srsf5b	75	73.451	ENSACAG00000005143	SRSF5	96	71.898	Anolis_carolinensis
ENSPLAG00000006480	srsf5b	61	84.409	ENSANAG00000027977	-	76	90.667	Aotus_nancymaae
ENSPLAG00000006480	srsf5b	100	90.759	ENSACLG00000026424	srsf5b	92	93.704	Astatotilapia_calliptera
ENSPLAG00000006480	srsf5b	63	94.211	ENSAMXG00000011932	srsf5b	84	93.798	Astyanax_mexicanus
ENSPLAG00000006480	srsf5b	64	83.420	ENSTSYG00000007786	SRSF5	98	70.522	Carlito_syrichta
ENSPLAG00000006480	srsf5b	61	84.409	ENSCAPG00000008801	SRSF5	97	71.273	Cavia_aperea
ENSPLAG00000006480	srsf5b	61	84.409	ENSCPOG00000039926	SRSF5	91	72.348	Cavia_porcellus
ENSPLAG00000006480	srsf5b	61	84.409	ENSCCAG00000029002	SRSF5	76	90.667	Cebus_capucinus
ENSPLAG00000006480	srsf5b	61	84.409	ENSCATG00000045051	SRSF5	76	90.667	Cercocebus_atys
ENSPLAG00000006480	srsf5b	64	83.420	ENSCLAG00000004755	SRSF5	96	71.119	Chinchilla_lanigera
ENSPLAG00000006480	srsf5b	75	73.009	ENSCPBG00000021653	SRSF5	96	71.533	Chrysemys_picta_bellii
ENSPLAG00000006480	srsf5b	61	84.409	ENSCANG00000030560	SRSF5	76	90.667	Colobus_angolensis_palliatus
ENSPLAG00000006480	srsf5b	81	92.308	ENSCSEG00000003801	srsf5b	91	90.262	Cynoglossus_semilaevis
ENSPLAG00000006480	srsf5b	90	86.552	ENSCVAG00000017240	srsf5b	88	90.625	Cyprinodon_variegatus
ENSPLAG00000006480	srsf5b	62	94.086	ENSDARG00000027734	srsf5b	90	93.023	Danio_rerio
ENSPLAG00000006480	srsf5b	61	84.409	ENSDNOG00000006160	SRSF5	87	67.790	Dasypus_novemcinctus
ENSPLAG00000006480	srsf5b	61	78.919	ENSETEG00000020396	SRSF5	87	65.789	Echinops_telfairi
ENSPLAG00000006480	srsf5b	63	62.564	ENSEBUG00000006229	srsf5b	89	52.727	Eptatretus_burgeri
ENSPLAG00000006480	srsf5b	89	70.957	ENSELUG00000019852	srsf5b	85	86.111	Esox_lucius
ENSPLAG00000006480	srsf5b	61	81.622	ENSFALG00000004979	SRSF5	94	72.556	Ficedula_albicollis
ENSPLAG00000006480	srsf5b	61	84.409	ENSFDAG00000011562	SRSF5	87	67.790	Fukomys_damarensis
ENSPLAG00000006480	srsf5b	100	94.481	ENSFHEG00000009476	srsf5b	100	94.481	Fundulus_heteroclitus
ENSPLAG00000006480	srsf5b	63	80.531	ENSGMOG00000000595	srsf5b	99	80.531	Gadus_morhua
ENSPLAG00000006480	srsf5b	61	81.081	ENSGALG00000009421	SRSF5	98	65.672	Gallus_gallus
ENSPLAG00000006480	srsf5b	100	99.007	ENSGAFG00000002865	srsf5b	100	99.007	Gambusia_affinis
ENSPLAG00000006480	srsf5b	62	69.512	ENSGACG00000007834	srsf5b	86	88.235	Gasterosteus_aculeatus
ENSPLAG00000006480	srsf5b	75	73.009	ENSGAGG00000004447	SRSF5	96	71.533	Gopherus_agassizii
ENSPLAG00000006480	srsf5b	61	84.409	ENSGGOG00000016462	SRSF5	76	90.667	Gorilla_gorilla
ENSPLAG00000006480	srsf5b	100	90.429	ENSHBUG00000012462	srsf5b	93	99.225	Haplochromis_burtoni
ENSPLAG00000006480	srsf5b	59	59.444	ENSHGLG00100000095	-	62	59.116	Heterocephalus_glaber_male
ENSPLAG00000006480	srsf5b	63	89.062	ENSHCOG00000005592	srsf5b	91	78.909	Hippocampus_comes
ENSPLAG00000006480	srsf5b	89	95.185	ENSKMAG00000020486	srsf5b	89	94.815	Kryptolebias_marmoratus
ENSPLAG00000006480	srsf5b	89	91.513	ENSLBEG00000013647	srsf5b	92	91.882	Labrus_bergylta
ENSPLAG00000006480	srsf5b	61	84.865	ENSLACG00000005874	SRSF5	92	74.812	Latimeria_chalumnae
ENSPLAG00000006480	srsf5b	61	86.842	ENSLOCG00000012438	srsf5b	94	66.909	Lepisosteus_oculatus
ENSPLAG00000006480	srsf5b	61	83.871	ENSLAFG00000005260	SRSF5	86	67.416	Loxodonta_africana
ENSPLAG00000006480	srsf5b	61	84.409	ENSMFAG00000002393	SRSF5	76	90.667	Macaca_fascicularis
ENSPLAG00000006480	srsf5b	61	84.409	ENSMNEG00000030872	SRSF5	76	90.667	Macaca_nemestrina
ENSPLAG00000006480	srsf5b	61	84.409	ENSMLEG00000030017	SRSF5	76	90.667	Mandrillus_leucophaeus
ENSPLAG00000006480	srsf5b	83	90.873	ENSMAMG00000002673	srsf5b	92	91.852	Mastacembelus_armatus
ENSPLAG00000006480	srsf5b	100	90.759	ENSMZEG00005003550	srsf5b	92	93.704	Maylandia_zebra
ENSPLAG00000006480	srsf5b	64	83.938	ENSMODG00000011362	SRSF5	96	71.168	Monodelphis_domestica
ENSPLAG00000006480	srsf5b	89	91.912	ENSMALG00000021875	srsf5b	92	92.279	Monopterus_albus
ENSPLAG00000006480	srsf5b	100	87.829	ENSNBRG00000001285	srsf5b	92	92.620	Neolamprologus_brichardi
ENSPLAG00000006480	srsf5b	61	84.409	ENSNLEG00000001615	SRSF5	76	90.667	Nomascus_leucogenys
ENSPLAG00000006480	srsf5b	64	83.420	ENSOPRG00000008286	SRSF5	95	65.704	Ochotona_princeps
ENSPLAG00000006480	srsf5b	61	84.409	ENSODEG00000013469	-	92	72.901	Octodon_degus
ENSPLAG00000006480	srsf5b	100	90.759	ENSONIG00000005759	srsf5b	92	93.704	Oreochromis_niloticus
ENSPLAG00000006480	srsf5b	65	78.680	ENSOANG00000013336	SRSF5	96	66.071	Ornithorhynchus_anatinus
ENSPLAG00000006480	srsf5b	93	68.327	ENSOCUG00000009274	SRSF5	95	67.986	Oryctolagus_cuniculus
ENSPLAG00000006480	srsf5b	89	79.798	ENSORLG00000029854	srsf5b	92	79.798	Oryzias_latipes
ENSPLAG00000006480	srsf5b	89	91.144	ENSORLG00015001720	srsf5b	92	91.513	Oryzias_latipes_hsok
ENSPLAG00000006480	srsf5b	90	90.842	ENSOMEG00000020690	srsf5b	67	90.741	Oryzias_melastigma
ENSPLAG00000006480	srsf5b	61	84.409	ENSPPAG00000029921	SRSF5	76	90.667	Pan_paniscus
ENSPLAG00000006480	srsf5b	61	84.409	ENSPTRG00000006488	SRSF5	76	90.667	Pan_troglodytes
ENSPLAG00000006480	srsf5b	61	84.409	ENSPANG00000021091	SRSF5	76	90.667	Papio_anubis
ENSPLAG00000006480	srsf5b	61	84.946	ENSPSIG00000012522	SRSF5	93	73.664	Pelodiscus_sinensis
ENSPLAG00000006480	srsf5b	63	61.111	ENSPMAG00000007790	srsf5b	92	52.399	Petromyzon_marinus
ENSPLAG00000006480	srsf5b	64	83.938	ENSPCIG00000011877	SRSF5	96	71.168	Phascolarctos_cinereus
ENSPLAG00000006480	srsf5b	100	99.669	ENSPFOG00000017700	srsf5b	100	99.669	Poecilia_formosa
ENSPLAG00000006480	srsf5b	100	99.669	ENSPMEG00000012751	srsf5b	100	99.669	Poecilia_mexicana
ENSPLAG00000006480	srsf5b	100	99.007	ENSPREG00000010381	srsf5b	100	99.007	Poecilia_reticulata
ENSPLAG00000006480	srsf5b	51	80.519	ENSPCAG00000004405	SRSF5	100	79.085	Procavia_capensis
ENSPLAG00000006480	srsf5b	100	82.838	ENSPNYG00000002669	srsf5b	94	99.225	Pundamilia_nyererei
ENSPLAG00000006480	srsf5b	63	93.684	ENSPNAG00000011262	srsf5b	84	93.023	Pygocentrus_nattereri
ENSPLAG00000006480	srsf5b	61	84.409	ENSRBIG00000013003	SRSF5	76	90.667	Rhinopithecus_bieti
ENSPLAG00000006480	srsf5b	61	84.409	ENSRROG00000043407	SRSF5	76	90.667	Rhinopithecus_roxellana
ENSPLAG00000006480	srsf5b	61	84.409	ENSSBOG00000030784	SRSF5	76	90.667	Saimiri_boliviensis_boliviensis
ENSPLAG00000006480	srsf5b	64	83.938	ENSSHAG00000002871	SRSF5	96	71.168	Sarcophilus_harrisii
ENSPLAG00000006480	srsf5b	90	82.215	ENSSMAG00000019728	srsf5b	91	82.712	Scophthalmus_maximus
ENSPLAG00000006480	srsf5b	86	90.840	ENSSDUG00000005766	srsf5b	92	92.748	Seriola_dumerili
ENSPLAG00000006480	srsf5b	89	90.741	ENSSLDG00000023255	srsf5b	92	92.593	Seriola_lalandi_dorsalis
ENSPLAG00000006480	srsf5b	61	70.811	ENSSARG00000001059	SRSF5	87	59.176	Sorex_araneus
ENSPLAG00000006480	srsf5b	75	70.000	ENSSPUG00000002464	SRSF5	96	68.293	Sphenodon_punctatus
ENSPLAG00000006480	srsf5b	89	93.704	ENSSPAG00000015325	srsf5b	92	93.704	Stegastes_partitus
ENSPLAG00000006480	srsf5b	61	81.622	ENSTGUG00000011425	SRSF5	94	72.932	Taeniopygia_guttata
ENSPLAG00000006480	srsf5b	63	90.476	ENSTRUG00000017811	srsf5b	95	77.592	Takifugu_rubripes
ENSPLAG00000006480	srsf5b	91	80.496	ENSTNIG00000016411	srsf5b	95	77.224	Tetraodon_nigroviridis
ENSPLAG00000006480	srsf5b	64	81.347	ENSTBEG00000001972	SRSF5	96	67.391	Tupaia_belangeri
ENSPLAG00000006480	srsf5b	64	83.226	ENSUMAG00000009827	SRSF5	96	63.309	Ursus_maritimus
ENSPLAG00000006480	srsf5b	62	83.511	ENSXETG00000002211	srsf5	94	73.134	Xenopus_tropicalis
ENSPLAG00000006480	srsf5b	100	96.358	ENSXCOG00000001570	srsf5b	100	96.358	Xiphophorus_couchianus
ENSPLAG00000006480	srsf5b	100	99.007	ENSXMAG00000026416	srsf5b	100	99.007	Xiphophorus_maculatus