EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006548 (Gene tree)
Gene ID: 106940185
Gene Symbol: -
Alias: -
Full Name: oocyte-specific histone RNA stem-loop-binding protein 2-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 7064 bases
Position: chrKQ548391.1:831-7894
Accession: 106940185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000022197	SLBP_RNA_bind	PF15247.6	3.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009031	-	2001	XM_015022850	ENSPLAP00000022197	334 (aa)	XP_014878336	-

Gene Model

Click here to download ENSPLAG00000006548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006548	-	100	98.817	ENSPLAG00000019220	slbp2	100	98.817

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006548	-	93	57.595	ENSAPOG00000004873	slbp2	98	58.228	Acanthochromis_polyacanthus
ENSPLAG00000006548	-	93	71.562	ENSACIG00000007875	slbp2	95	70.625	Amphilophus_citrinellus
ENSPLAG00000006548	-	100	76.657	ENSAOCG00000016241	slbp2	95	77.019	Amphiprion_ocellaris
ENSPLAG00000006548	-	81	67.944	ENSAPEG00000008972	slbp2	98	67.944	Amphiprion_percula
ENSPLAG00000006548	-	81	75.874	ENSATEG00000009765	slbp2	95	75.175	Anabas_testudineus
ENSPLAG00000006548	-	100	74.785	ENSACLG00000000965	slbp2	100	74.212	Astatotilapia_calliptera
ENSPLAG00000006548	-	100	74.785	ENSACLG00000001252	slbp2	100	74.212	Astatotilapia_calliptera
ENSPLAG00000006548	-	93	49.536	ENSAMXG00000029210	slbp2	89	51.515	Astyanax_mexicanus
ENSPLAG00000006548	-	100	69.315	ENSCSEG00000006662	slbp2	100	68.767	Cynoglossus_semilaevis
ENSPLAG00000006548	-	86	64.138	ENSCVAG00000003498	slbp2	86	64.138	Cyprinodon_variegatus
ENSPLAG00000006548	-	85	53.952	ENSDARG00000069428	slbp2	87	53.952	Danio_rerio
ENSPLAG00000006548	-	100	52.273	ENSELUG00000021799	slbp2	95	54.294	Esox_lucius
ENSPLAG00000006548	-	79	59.206	ENSGMOG00000003044	slbp2	100	59.140	Gadus_morhua
ENSPLAG00000006548	-	91	73.290	ENSGAFG00000009788	slbp2	99	73.290	Gambusia_affinis
ENSPLAG00000006548	-	100	75.358	ENSHBUG00000019207	slbp2	100	74.785	Haplochromis_burtoni
ENSPLAG00000006548	-	100	69.914	ENSHCOG00000002192	slbp2	100	69.628	Hippocampus_comes
ENSPLAG00000006548	-	81	51.471	ENSIPUG00000024079	slbp2	87	50.357	Ictalurus_punctatus
ENSPLAG00000006548	-	100	81.050	ENSKMAG00000005391	-	100	80.466	Kryptolebias_marmoratus
ENSPLAG00000006548	-	100	77.077	ENSLBEG00000001991	slbp2	100	75.287	Labrus_bergylta
ENSPLAG00000006548	-	100	74.000	ENSMAMG00000022433	slbp2	100	73.714	Mastacembelus_armatus
ENSPLAG00000006548	-	100	75.072	ENSMZEG00005027825	slbp2	100	74.499	Maylandia_zebra
ENSPLAG00000006548	-	73	70.751	ENSMMOG00000016838	slbp2	90	70.751	Mola_mola
ENSPLAG00000006548	-	100	70.201	ENSMALG00000009687	slbp2	95	70.487	Monopterus_albus
ENSPLAG00000006548	-	90	55.519	ENSNBRG00000017849	slbp2	95	55.519	Neolamprologus_brichardi
ENSPLAG00000006548	-	95	73.939	ENSONIG00000017877	slbp2	95	75.153	Oreochromis_niloticus
ENSPLAG00000006548	-	100	74.636	ENSORLG00000025890	slbp2	100	74.927	Oryzias_latipes
ENSPLAG00000006548	-	100	74.344	ENSORLG00020003230	slbp2	100	74.636	Oryzias_latipes_hni
ENSPLAG00000006548	-	100	74.927	ENSORLG00015007694	slbp2	100	75.219	Oryzias_latipes_hsok
ENSPLAG00000006548	-	100	76.968	ENSOMEG00000017456	slbp2	100	76.676	Oryzias_melastigma
ENSPLAG00000006548	-	87	48.860	ENSPKIG00000008757	slbp2	96	48.860	Paramormyrops_kingsleyae
ENSPLAG00000006548	-	66	56.164	ENSPMGG00000008118	slbp2	59	85.556	Periophthalmus_magnuspinnatus
ENSPLAG00000006548	-	100	98.817	ENSPFOG00000021993	slbp2	100	100.000	Poecilia_formosa
ENSPLAG00000006548	-	100	98.521	ENSPMEG00000024341	slbp2	100	98.521	Poecilia_mexicana
ENSPLAG00000006548	-	91	54.221	ENSPNYG00000022514	slbp2	100	54.221	Pundamilia_nyererei
ENSPLAG00000006548	-	93	51.097	ENSPNAG00000013685	slbp2	82	55.762	Pygocentrus_nattereri
ENSPLAG00000006548	-	56	49.038	ENSSFOG00015015666	-	91	49.038	Scleropages_formosus
ENSPLAG00000006548	-	100	73.699	ENSSMAG00000011121	slbp2	100	72.832	Scophthalmus_maximus
ENSPLAG00000006548	-	100	79.070	ENSSDUG00000023370	slbp2	100	78.198	Seriola_dumerili
ENSPLAG00000006548	-	86	58.219	ENSSLDG00000008723	slbp2	76	58.219	Seriola_lalandi_dorsalis
ENSPLAG00000006548	-	81	73.145	ENSSPAG00000011574	slbp2	98	74.205	Stegastes_partitus
ENSPLAG00000006548	-	100	72.886	ENSTRUG00000021937	slbp2	100	72.012	Takifugu_rubripes
ENSPLAG00000006548	-	100	92.308	ENSXMAG00000007005	slbp2	100	92.308	Xiphophorus_maculatus