EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000006653 (Gene tree)
Gene ID
106952594
Gene Symbol
ythdf1
Alias
-
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
13041 bases
Position
chrKQ545346.1:152687-165727
Accession
106952594
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000004855YTHPF04146.156.6e-4111
ENSPLAP00000004873YTHPF04146.156.7e-4111
ENSPLAP00000004885YTHPF04146.156.7e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000008901-3463-ENSPLAP00000004873606 (aa)-UPI00051492FF
ENSPLAT00000008920-1695-ENSPLAP00000004855564 (aa)--
ENSPLAT00000008892-3463XM_015040803ENSPLAP00000004885606 (aa)XP_014896289UPI00051492FF
Gene Model
Click here to download ENSPLAG00000006653's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006653's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000006653ythdf110075.000ENSPLAG00000006298YTHDF19975.039
ENSPLAG00000006653ythdf19759.686ENSPLAG00000009752ythdf29959.866
ENSPLAG00000006653ythdf19956.592ENSPLAG00000006902ythdf39956.778
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000006653ythdf19872.760ENSG00000149658YTHDF19972.759Homo_sapiens
ENSPLAG00000006653ythdf19778.836ENSAPOG00000010796YTHDF19979.545Acanthochromis_polyacanthus
ENSPLAG00000006653ythdf110089.839ENSAPOG00000004358ythdf19991.099Acanthochromis_polyacanthus
ENSPLAG00000006653ythdf19572.407ENSAMEG00000017323YTHDF19574.229Ailuropoda_melanoleuca
ENSPLAG00000006653ythdf19780.036ENSACIG00000020083YTHDF19979.751Amphilophus_citrinellus
ENSPLAG00000006653ythdf19785.842ENSACIG00000011264ythdf19986.038Amphilophus_citrinellus
ENSPLAG00000006653ythdf110089.822ENSAOCG00000022251ythdf110089.822Amphiprion_ocellaris
ENSPLAG00000006653ythdf19778.766ENSAOCG00000012567YTHDF19979.469Amphiprion_ocellaris
ENSPLAG00000006653ythdf110089.822ENSAPEG00000021878ythdf110089.822Amphiprion_percula
ENSPLAG00000006653ythdf19778.947ENSAPEG00000008750YTHDF19979.646Amphiprion_percula
ENSPLAG00000006653ythdf110089.286ENSATEG00000023840ythdf110089.935Anabas_testudineus
ENSPLAG00000006653ythdf19780.797ENSATEG00000005996YTHDF19980.851Anabas_testudineus
ENSPLAG00000006653ythdf19573.443ENSAPLG00000005985YTHDF19674.229Anas_platyrhynchos
ENSPLAG00000006653ythdf19872.212ENSACAG00000005560YTHDF19972.822Anolis_carolinensis
ENSPLAG00000006653ythdf19872.890ENSANAG00000034786-9972.711Aotus_nancymaae
ENSPLAG00000006653ythdf19960.708ENSANAG00000021022-9961.336Aotus_nancymaae
ENSPLAG00000006653ythdf19779.129ENSACLG00000025518YTHDF19979.823Astatotilapia_calliptera
ENSPLAG00000006653ythdf19770.495ENSBTAG00000010383YTHDF19970.681Bos_taurus
ENSPLAG00000006653ythdf19872.711ENSCJAG00000010056YTHDF19972.329Callithrix_jacchus
ENSPLAG00000006653ythdf18972.584ENSCAFG00000012772YTHDF19873.359Canis_familiaris
ENSPLAG00000006653ythdf18972.584ENSCAFG00020001214YTHDF19873.359Canis_lupus_dingo
ENSPLAG00000006653ythdf19770.641ENSCHIG00000026494YTHDF19970.804Capra_hircus
ENSPLAG00000006653ythdf19673.112ENSTSYG00000033436YTHDF19774.141Carlito_syrichta
ENSPLAG00000006653ythdf19772.202ENSCAPG00000002544YTHDF19372.272Cavia_aperea
ENSPLAG00000006653ythdf19871.505ENSCPOG00000010202YTHDF19971.629Cavia_porcellus
ENSPLAG00000006653ythdf19971.605ENSCCAG00000024650YTHDF19972.504Cebus_capucinus
ENSPLAG00000006653ythdf19872.890ENSCATG00000033272YTHDF19972.887Cercocebus_atys
ENSPLAG00000006653ythdf19872.093ENSCLAG00000005989YTHDF19972.935Chinchilla_lanigera
ENSPLAG00000006653ythdf19872.890ENSCSAG00000016266YTHDF19972.887Chlorocebus_sabaeus
ENSPLAG00000006653ythdf19873.882ENSCPBG00000027183YTHDF19973.333Chrysemys_picta_bellii
ENSPLAG00000006653ythdf19573.889ENSCANG00000029082YTHDF19573.866Colobus_angolensis_palliatus
ENSPLAG00000006653ythdf19972.389ENSCGRG00001016568Ythdf19972.389Cricetulus_griseus_chok1gshd
ENSPLAG00000006653ythdf19573.333ENSCGRG00000009207Ythdf19773.358Cricetulus_griseus_crigri
ENSPLAG00000006653ythdf19785.018ENSCSEG00000020623YTHDF19986.819Cynoglossus_semilaevis
ENSPLAG00000006653ythdf110093.659ENSCVAG00000017940ythdf110093.496Cyprinodon_variegatus
ENSPLAG00000006653ythdf19580.037ENSCVAG00000014378YTHDF19879.391Cyprinodon_variegatus
ENSPLAG00000006653ythdf19980.405ENSDARG00000016447ythdf19980.713Danio_rerio
ENSPLAG00000006653ythdf19871.809ENSDNOG00000043590YTHDF19972.456Dasypus_novemcinctus
ENSPLAG00000006653ythdf19671.033ENSDORG00000002879Ythdf19372.101Dipodomys_ordii
ENSPLAG00000006653ythdf17858.503ENSETEG00000017860-9858.503Echinops_telfairi
ENSPLAG00000006653ythdf110072.183ENSEASG00005023186YTHDF19972.840Equus_asinus_asinus
ENSPLAG00000006653ythdf19972.518ENSECAG00000019475YTHDF19873.694Equus_caballus
ENSPLAG00000006653ythdf19072.340ENSEEUG00000007461YTHDF19872.676Erinaceus_europaeus
ENSPLAG00000006653ythdf19971.605ENSELUG00000001906YTHDF19878.571Esox_lucius
ENSPLAG00000006653ythdf19983.876ENSELUG00000022768ythdf19983.902Esox_lucius
ENSPLAG00000006653ythdf19770.886ENSFCAG00000008917YTHDF19972.310Felis_catus
ENSPLAG00000006653ythdf19872.776ENSFALG00000010463YTHDF19972.807Ficedula_albicollis
ENSPLAG00000006653ythdf19872.143ENSFDAG00000019602YTHDF19972.281Fukomys_damarensis
ENSPLAG00000006653ythdf110095.440ENSFHEG00000023218ythdf110095.440Fundulus_heteroclitus
ENSPLAG00000006653ythdf19581.192ENSFHEG00000002540YTHDF19880.978Fundulus_heteroclitus
ENSPLAG00000006653ythdf15682.353ENSGMOG00000019610ythdf19980.328Gadus_morhua
ENSPLAG00000006653ythdf19872.291ENSGALG00000005745YTHDF19973.063Gallus_gallus
ENSPLAG00000006653ythdf19975.920ENSGAFG00000021100YTHDF19879.673Gambusia_affinis
ENSPLAG00000006653ythdf19978.045ENSGACG00000002613YTHDF19978.388Gasterosteus_aculeatus
ENSPLAG00000006653ythdf19986.656ENSGACG00000012014ythdf19986.656Gasterosteus_aculeatus
ENSPLAG00000006653ythdf19873.975ENSGAGG00000003007YTHDF19973.814Gopherus_agassizii
ENSPLAG00000006653ythdf19872.760ENSGGOG00000008340YTHDF19972.759Gorilla_gorilla
ENSPLAG00000006653ythdf19778.947ENSHBUG00000004875YTHDF19979.646Haplochromis_burtoni
ENSPLAG00000006653ythdf19989.803ENSHBUG00000011284ythdf19790.132Haplochromis_burtoni
ENSPLAG00000006653ythdf19872.352ENSHGLG00000006585YTHDF19972.663Heterocephalus_glaber_female
ENSPLAG00000006653ythdf19872.352ENSHGLG00100004683YTHDF19972.663Heterocephalus_glaber_male
ENSPLAG00000006653ythdf19785.309ENSHCOG00000008866ythdf19985.309Hippocampus_comes
ENSPLAG00000006653ythdf19974.799ENSHCOG00000011303YTHDF19878.343Hippocampus_comes
ENSPLAG00000006653ythdf19978.862ENSIPUG00000000425Ythdf19979.024Ictalurus_punctatus
ENSPLAG00000006653ythdf19573.148ENSSTOG00000023001YTHDF19773.779Ictidomys_tridecemlineatus
ENSPLAG00000006653ythdf19773.285ENSJJAG00000013589Ythdf19773.140Jaculus_jaculus
ENSPLAG00000006653ythdf110091.967ENSKMAG00000005595ythdf110091.967Kryptolebias_marmoratus
ENSPLAG00000006653ythdf19976.639ENSKMAG00000017472YTHDF19880.657Kryptolebias_marmoratus
ENSPLAG00000006653ythdf110089.414ENSLBEG00000014105ythdf110089.414Labrus_bergylta
ENSPLAG00000006653ythdf19779.286ENSLBEG00000012068YTHDF19978.883Labrus_bergylta
ENSPLAG00000006653ythdf19772.401ENSLACG00000014195YTHDF19873.619Latimeria_chalumnae
ENSPLAG00000006653ythdf19974.216ENSLOCG00000005020ythdf19974.092Lepisosteus_oculatus
ENSPLAG00000006653ythdf19872.760ENSLAFG00000008884YTHDF19972.438Loxodonta_africana
ENSPLAG00000006653ythdf19872.890ENSMFAG00000042868YTHDF19972.887Macaca_fascicularis
ENSPLAG00000006653ythdf19873.599ENSMMUG00000009227YTHDF19972.887Macaca_mulatta
ENSPLAG00000006653ythdf19872.890ENSMNEG00000030851YTHDF19972.887Macaca_nemestrina
ENSPLAG00000006653ythdf19774.088ENSMLEG00000009252YTHDF19774.047Mandrillus_leucophaeus
ENSPLAG00000006653ythdf19780.072ENSMAMG00000011072YTHDF19980.107Mastacembelus_armatus
ENSPLAG00000006653ythdf110089.088ENSMAMG00000024255ythdf110088.418Mastacembelus_armatus
ENSPLAG00000006653ythdf110089.869ENSMZEG00005026397ythdf110090.196Maylandia_zebra
ENSPLAG00000006653ythdf19778.947ENSMZEG00005023596YTHDF19979.646Maylandia_zebra
ENSPLAG00000006653ythdf19573.260ENSMGAG00000006139YTHDF19674.047Meleagris_gallopavo
ENSPLAG00000006653ythdf19972.163ENSMAUG00000017660Ythdf19972.212Mesocricetus_auratus
ENSPLAG00000006653ythdf19872.222ENSMICG00000032266YTHDF19972.438Microcebus_murinus
ENSPLAG00000006653ythdf19872.531ENSMOCG00000013573Ythdf19972.134Microtus_ochrogaster
ENSPLAG00000006653ythdf19784.274ENSMMOG00000017500ythdf19785.644Mola_mola
ENSPLAG00000006653ythdf19976.303ENSMMOG00000020467YTHDF19975.362Mola_mola
ENSPLAG00000006653ythdf18974.016ENSMODG00000016842YTHDF19873.552Monodelphis_domestica
ENSPLAG00000006653ythdf19779.242ENSMALG00000022209YTHDF19978.975Monopterus_albus
ENSPLAG00000006653ythdf110087.097ENSMALG00000015672ythdf110086.935Monopterus_albus
ENSPLAG00000006653ythdf19872.630MGP_CAROLIEiJ_G0024790Ythdf19972.487Mus_caroli
ENSPLAG00000006653ythdf19872.630ENSMUSG00000038848Ythdf19972.487Mus_musculus
ENSPLAG00000006653ythdf19872.630MGP_PahariEiJ_G0026237Ythdf19972.487Mus_pahari
ENSPLAG00000006653ythdf19872.630MGP_SPRETEiJ_G0025715Ythdf19972.487Mus_spretus
ENSPLAG00000006653ythdf18970.099ENSMPUG00000008111YTHDF19871.262Mustela_putorius_furo
ENSPLAG00000006653ythdf19673.540ENSMLUG00000002241YTHDF19573.866Myotis_lucifugus
ENSPLAG00000006653ythdf19872.890ENSNGAG00000000334Ythdf19972.711Nannospalax_galili
ENSPLAG00000006653ythdf19985.185ENSNBRG00000008213ythdf19889.112Neolamprologus_brichardi
ENSPLAG00000006653ythdf19778.947ENSNBRG00000015321YTHDF19979.646Neolamprologus_brichardi
ENSPLAG00000006653ythdf19567.970ENSOPRG00000001758-9967.598Ochotona_princeps
ENSPLAG00000006653ythdf19970.723ENSODEG00000004380-9972.007Octodon_degus
ENSPLAG00000006653ythdf19759.571ENSODEG00000000074-10057.781Octodon_degus
ENSPLAG00000006653ythdf19787.219ENSONIG00000016799ythdf19989.894Oreochromis_niloticus
ENSPLAG00000006653ythdf19873.345ENSOANG00000003723YTHDF19973.415Ornithorhynchus_anatinus
ENSPLAG00000006653ythdf19580.297ENSORLG00000009739YTHDF19879.174Oryzias_latipes
ENSPLAG00000006653ythdf110087.908ENSORLG00000014665YTHDF110086.765Oryzias_latipes
ENSPLAG00000006653ythdf19579.963ENSORLG00020001332YTHDF19879.174Oryzias_latipes_hni
ENSPLAG00000006653ythdf110088.380ENSORLG00020000307ythdf110087.234Oryzias_latipes_hni
ENSPLAG00000006653ythdf110088.216ENSORLG00015006302ythdf110087.070Oryzias_latipes_hsok
ENSPLAG00000006653ythdf19579.926ENSORLG00015018321YTHDF19878.815Oryzias_latipes_hsok
ENSPLAG00000006653ythdf110089.344ENSOMEG00000002941YTHDF110088.361Oryzias_melastigma
ENSPLAG00000006653ythdf19977.104ENSOMEG00000011843YTHDF19975.962Oryzias_melastigma
ENSPLAG00000006653ythdf19871.429ENSOGAG00000000480YTHDF19971.404Otolemur_garnettii
ENSPLAG00000006653ythdf19570.356ENSOARG00000011639YTHDF18882.843Ovis_aries
ENSPLAG00000006653ythdf19773.732ENSPPAG00000023277YTHDF19773.913Pan_paniscus
ENSPLAG00000006653ythdf19771.429ENSPPRG00000020805YTHDF19972.663Panthera_pardus
ENSPLAG00000006653ythdf18279.018ENSPTIG00000017355YTHDF19577.593Panthera_tigris_altaica
ENSPLAG00000006653ythdf19872.760ENSPTRG00000013730YTHDF19972.759Pan_troglodytes
ENSPLAG00000006653ythdf19872.890ENSPANG00000021472YTHDF19972.887Papio_anubis
ENSPLAG00000006653ythdf19973.958ENSPKIG00000005026YTHDF19974.957Paramormyrops_kingsleyae
ENSPLAG00000006653ythdf19973.805ENSPKIG00000005427ythdf19973.322Paramormyrops_kingsleyae
ENSPLAG00000006653ythdf19773.960ENSPSIG00000005529YTHDF19674.503Pelodiscus_sinensis
ENSPLAG00000006653ythdf19684.615ENSPMGG00000015328ythdf19886.237Periophthalmus_magnuspinnatus
ENSPLAG00000006653ythdf19578.369ENSPMGG00000009101YTHDF19978.485Periophthalmus_magnuspinnatus
ENSPLAG00000006653ythdf19773.358ENSPEMG00000020199Ythdf19973.175Peromyscus_maniculatus_bairdii
ENSPLAG00000006653ythdf19973.462ENSPCIG00000017170YTHDF19873.745Phascolarctos_cinereus
ENSPLAG00000006653ythdf1100100.000ENSPFOG00000005405ythdf1100100.000Poecilia_formosa
ENSPLAG00000006653ythdf19975.920ENSPMEG00000020969-9978.546Poecilia_mexicana
ENSPLAG00000006653ythdf110099.012ENSPMEG00000023753ythdf110099.012Poecilia_mexicana
ENSPLAG00000006653ythdf19776.420ENSPREG00000017662YTHDF19876.578Poecilia_reticulata
ENSPLAG00000006653ythdf110098.936ENSPREG00000002173ythdf110098.936Poecilia_reticulata
ENSPLAG00000006653ythdf18685.787ENSPPYG00000011226YTHDF19887.879Pongo_abelii
ENSPLAG00000006653ythdf19070.727ENSPCAG00000002452YTHDF110070.746Procavia_capensis
ENSPLAG00000006653ythdf19872.581ENSPCOG00000025969YTHDF19972.408Propithecus_coquereli
ENSPLAG00000006653ythdf19768.807ENSPVAG00000017568YTHDF19769.780Pteropus_vampyrus
ENSPLAG00000006653ythdf19989.803ENSPNYG00000014007ythdf19989.062Pundamilia_nyererei
ENSPLAG00000006653ythdf19778.947ENSPNYG00000002266YTHDF19979.646Pundamilia_nyererei
ENSPLAG00000006653ythdf19981.270ENSPNAG00000012447ythdf19981.789Pygocentrus_nattereri
ENSPLAG00000006653ythdf19872.630ENSRNOG00000027015Ythdf19972.663Rattus_norvegicus
ENSPLAG00000006653ythdf19871.505ENSRBIG00000044959YTHDF19972.007Rhinopithecus_bieti
ENSPLAG00000006653ythdf19871.505ENSRROG00000033014YTHDF19972.007Rhinopithecus_roxellana
ENSPLAG00000006653ythdf19672.694ENSSBOG00000027278YTHDF19871.593Saimiri_boliviensis_boliviensis
ENSPLAG00000006653ythdf19574.265ENSSHAG00000010430YTHDF18574.229Sarcophilus_harrisii
ENSPLAG00000006653ythdf19975.652ENSSFOG00015000284ythdf19976.268Scleropages_formosus
ENSPLAG00000006653ythdf19683.502ENSSMAG00000007635YTHDF19579.581Scophthalmus_maximus
ENSPLAG00000006653ythdf17793.529ENSSMAG00000013715ythdf19588.278Scophthalmus_maximus
ENSPLAG00000006653ythdf19583.793ENSSDUG00000015823YTHDF19680.769Seriola_dumerili
ENSPLAG00000006653ythdf110089.499ENSSDUG00000000435ythdf110089.499Seriola_dumerili
ENSPLAG00000006653ythdf19974.877ENSSLDG00000001054YTHDF19391.795Seriola_lalandi_dorsalis
ENSPLAG00000006653ythdf19989.286ENSSLDG00000024948ythdf19989.286Seriola_lalandi_dorsalis
ENSPLAG00000006653ythdf18973.725ENSSPUG00000015143YTHDF19873.888Sphenodon_punctatus
ENSPLAG00000006653ythdf110089.727ENSSPAG00000014989ythdf110089.727Stegastes_partitus
ENSPLAG00000006653ythdf19778.456ENSSPAG00000003666YTHDF19978.809Stegastes_partitus
ENSPLAG00000006653ythdf19871.763ENSSSCG00000040086YTHDF19971.731Sus_scrofa
ENSPLAG00000006653ythdf19573.077ENSTGUG00000007565YTHDF19774.047Taeniopygia_guttata
ENSPLAG00000006653ythdf19586.278ENSTRUG00000004288ythdf19985.953Takifugu_rubripes
ENSPLAG00000006653ythdf19775.593ENSTRUG00000005049YTHDF19976.307Takifugu_rubripes
ENSPLAG00000006653ythdf19782.226ENSTNIG00000012490ythdf19982.601Tetraodon_nigroviridis
ENSPLAG00000006653ythdf19777.818ENSTNIG00000003975YTHDF19977.580Tetraodon_nigroviridis
ENSPLAG00000006653ythdf19971.504ENSTTRG00000001804YTHDF19972.007Tursiops_truncatus
ENSPLAG00000006653ythdf19672.794ENSUAMG00000011021YTHDF19873.552Ursus_americanus
ENSPLAG00000006653ythdf18972.495ENSUMAG00000022290YTHDF19872.937Ursus_maritimus
ENSPLAG00000006653ythdf18972.299ENSVVUG00000015275YTHDF19873.359Vulpes_vulpes
ENSPLAG00000006653ythdf19773.310ENSXETG00000027086ythdf19673.535Xenopus_tropicalis
ENSPLAG00000006653ythdf19776.158ENSXCOG00000008115YTHDF19976.617Xiphophorus_couchianus
ENSPLAG00000006653ythdf19897.658ENSXCOG00000002490ythdf19697.658Xiphophorus_couchianus
ENSPLAG00000006653ythdf110098.020ENSXMAG00000008525ythdf110098.020Xiphophorus_maculatus
ENSPLAG00000006653ythdf19976.087ENSXMAG00000015644YTHDF19880.581Xiphophorus_maculatus

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