EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006675 (Gene tree)
Gene ID: 106935428
Gene Symbol: nop53
Alias: -
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 10605 bases
Position: chrKQ545387.1:108597-119201
Accession: 106935428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004875	Nop53	PF07767.11	2.9e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000008898	-	1495	XM_015015881	ENSPLAP00000004875	468 (aa)	XP_014871367	UPI00072E1346

Gene Model

Click here to download ENSPLAG00000006675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006675	nop53	60	100.000	ENSPLAG00000009285	-	88	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006675	nop53	89	49.415	ENSG00000105373	NOP53	90	75.904	Homo_sapiens
ENSPLAG00000006675	nop53	100	78.632	ENSAPOG00000006446	nop53	100	79.487	Acanthochromis_polyacanthus
ENSPLAG00000006675	nop53	89	46.050	ENSAMEG00000015214	NOP53	88	45.598	Ailuropoda_melanoleuca
ENSPLAG00000006675	nop53	74	73.775	ENSACIG00000002467	nop53	99	73.775	Amphilophus_citrinellus
ENSPLAG00000006675	nop53	100	78.632	ENSAOCG00000007002	nop53	100	78.846	Amphiprion_ocellaris
ENSPLAG00000006675	nop53	100	79.060	ENSAPEG00000024564	nop53	100	79.274	Amphiprion_percula
ENSPLAG00000006675	nop53	96	76.615	ENSATEG00000021860	nop53	100	76.392	Anabas_testudineus
ENSPLAG00000006675	nop53	57	55.636	ENSACAG00000011362	-	93	55.636	Anolis_carolinensis
ENSPLAG00000006675	nop53	97	42.981	ENSANAG00000007933	NOP53	92	44.418	Aotus_nancymaae
ENSPLAG00000006675	nop53	100	76.709	ENSACLG00000011832	nop53	100	76.068	Astatotilapia_calliptera
ENSPLAG00000006675	nop53	97	61.472	ENSAMXG00000014883	nop53	99	62.208	Astyanax_mexicanus
ENSPLAG00000006675	nop53	89	48.499	ENSBTAG00000021192	NOP53	79	48.268	Bos_taurus
ENSPLAG00000006675	nop53	89	48.174	ENSCJAG00000011385	NOP53	88	48.956	Callithrix_jacchus
ENSPLAG00000006675	nop53	97	47.257	ENSCAFG00000004080	NOP53	88	48.848	Canis_familiaris
ENSPLAG00000006675	nop53	89	48.718	ENSCHIG00000009393	NOP53	88	48.485	Capra_hircus
ENSPLAG00000006675	nop53	89	43.925	ENSTSYG00000036631	NOP53	86	44.368	Carlito_syrichta
ENSPLAG00000006675	nop53	84	48.395	ENSCAPG00000013148	NOP53	99	48.395	Cavia_aperea
ENSPLAG00000006675	nop53	89	49.417	ENSCPOG00000015665	NOP53	88	49.417	Cavia_porcellus
ENSPLAG00000006675	nop53	89	49.415	ENSCCAG00000025477	NOP53	87	49.415	Cebus_capucinus
ENSPLAG00000006675	nop53	89	48.946	ENSCATG00000032842	NOP53	87	48.946	Cercocebus_atys
ENSPLAG00000006675	nop53	99	45.773	ENSCLAG00000001860	NOP53	88	48.028	Chinchilla_lanigera
ENSPLAG00000006675	nop53	89	48.946	ENSCSAG00000002928	NOP53	87	48.946	Chlorocebus_sabaeus
ENSPLAG00000006675	nop53	85	50.365	ENSCPBG00000009047	NOP53	94	50.243	Chrysemys_picta_bellii
ENSPLAG00000006675	nop53	89	32.333	ENSCING00000021395	-	96	32.569	Ciona_intestinalis
ENSPLAG00000006675	nop53	89	32.874	ENSCSAVG00000006009	-	95	33.333	Ciona_savignyi
ENSPLAG00000006675	nop53	89	47.630	ENSCANG00000039648	NOP53	86	47.393	Colobus_angolensis_palliatus
ENSPLAG00000006675	nop53	89	48.492	ENSCGRG00001019033	Nop53	88	48.492	Cricetulus_griseus_chok1gshd
ENSPLAG00000006675	nop53	99	65.944	ENSCSEG00000014834	nop53	98	66.377	Cynoglossus_semilaevis
ENSPLAG00000006675	nop53	100	86.966	ENSCVAG00000005940	nop53	100	86.966	Cyprinodon_variegatus
ENSPLAG00000006675	nop53	99	62.208	ENSDARG00000100452	nop53	99	62.208	Danio_rerio
ENSPLAG00000006675	nop53	89	49.074	ENSDNOG00000005165	NOP53	79	48.364	Dasypus_novemcinctus
ENSPLAG00000006675	nop53	93	43.468	ENSEBUG00000012747	nop53	90	42.791	Eptatretus_burgeri
ENSPLAG00000006675	nop53	97	46.695	ENSEASG00005004345	NOP53	84	48.506	Equus_asinus_asinus
ENSPLAG00000006675	nop53	97	46.203	ENSECAG00000026850	NOP53	84	47.955	Equus_caballus
ENSPLAG00000006675	nop53	86	81.250	ENSEEUG00000005287	NOP53	73	81.250	Erinaceus_europaeus
ENSPLAG00000006675	nop53	100	64.957	ENSELUG00000001525	nop53	100	64.957	Esox_lucius
ENSPLAG00000006675	nop53	89	48.157	ENSFCAG00000010861	NOP53	88	47.696	Felis_catus
ENSPLAG00000006675	nop53	89	44.186	ENSFDAG00000010478	NOP53	86	43.488	Fukomys_damarensis
ENSPLAG00000006675	nop53	100	87.179	ENSFHEG00000017763	nop53	97	87.179	Fundulus_heteroclitus
ENSPLAG00000006675	nop53	100	61.783	ENSGMOG00000014299	nop53	100	61.783	Gadus_morhua
ENSPLAG00000006675	nop53	97	45.851	ENSGALG00000039473	NOP53	70	48.526	Gallus_gallus
ENSPLAG00000006675	nop53	99	93.362	ENSGAFG00000013301	nop53	98	93.148	Gambusia_affinis
ENSPLAG00000006675	nop53	100	67.308	ENSGACG00000005766	nop53	100	67.735	Gasterosteus_aculeatus
ENSPLAG00000006675	nop53	89	44.676	ENSGGOG00000024728	-	87	45.221	Gorilla_gorilla
ENSPLAG00000006675	nop53	89	47.307	ENSGGOG00000005462	NOP53	87	47.307	Gorilla_gorilla
ENSPLAG00000006675	nop53	100	76.923	ENSHBUG00000023625	nop53	100	76.282	Haplochromis_burtoni
ENSPLAG00000006675	nop53	89	48.605	ENSHGLG00000018240	NOP53	88	48.605	Heterocephalus_glaber_female
ENSPLAG00000006675	nop53	66	63.717	ENSHGLG00100015613	NOP53	80	65.094	Heterocephalus_glaber_male
ENSPLAG00000006675	nop53	100	69.734	ENSHCOG00000017133	nop53	100	71.369	Hippocampus_comes
ENSPLAG00000006675	nop53	99	62.128	ENSIPUG00000008154	nop53	88	63.113	Ictalurus_punctatus
ENSPLAG00000006675	nop53	89	49.180	ENSSTOG00000022092	NOP53	87	49.180	Ictidomys_tridecemlineatus
ENSPLAG00000006675	nop53	89	46.977	ENSJJAG00000007854	Nop53	88	49.070	Jaculus_jaculus
ENSPLAG00000006675	nop53	96	82.222	ENSKMAG00000020756	nop53	100	82.000	Kryptolebias_marmoratus
ENSPLAG00000006675	nop53	100	73.932	ENSLBEG00000011432	nop53	100	74.359	Labrus_bergylta
ENSPLAG00000006675	nop53	85	53.186	ENSLACG00000018320	NOP53	99	53.186	Latimeria_chalumnae
ENSPLAG00000006675	nop53	100	58.974	ENSLOCG00000014178	nop53	100	60.128	Lepisosteus_oculatus
ENSPLAG00000006675	nop53	89	48.946	ENSMFAG00000045103	NOP53	87	48.946	Macaca_fascicularis
ENSPLAG00000006675	nop53	89	49.180	ENSMMUG00000013348	NOP53	99	66.019	Macaca_mulatta
ENSPLAG00000006675	nop53	89	49.180	ENSMNEG00000042540	NOP53	84	49.180	Macaca_nemestrina
ENSPLAG00000006675	nop53	89	43.160	ENSMLEG00000032475	NOP53	68	66.038	Mandrillus_leucophaeus
ENSPLAG00000006675	nop53	100	76.695	ENSMAMG00000012652	nop53	100	76.907	Mastacembelus_armatus
ENSPLAG00000006675	nop53	100	72.222	ENSMZEG00005005033	nop53	100	71.581	Maylandia_zebra
ENSPLAG00000006675	nop53	89	48.000	ENSMAUG00000012617	Nop53	87	48.000	Mesocricetus_auratus
ENSPLAG00000006675	nop53	91	46.413	ENSMICG00000005580	NOP53	92	47.597	Microcebus_murinus
ENSPLAG00000006675	nop53	89	48.706	ENSMOCG00000008367	Nop53	88	48.706	Microtus_ochrogaster
ENSPLAG00000006675	nop53	100	75.532	ENSMMOG00000006515	nop53	100	75.319	Mola_mola
ENSPLAG00000006675	nop53	99	47.817	ENSMODG00000008721	NOP53	92	46.138	Monodelphis_domestica
ENSPLAG00000006675	nop53	100	76.282	ENSMALG00000020350	nop53	96	77.137	Monopterus_albus
ENSPLAG00000006675	nop53	89	48.157	MGP_CAROLIEiJ_G0029218	Nop53	88	48.157	Mus_caroli
ENSPLAG00000006675	nop53	89	48.037	ENSMUSG00000041560	Nop53	88	48.037	Mus_musculus
ENSPLAG00000006675	nop53	86	46.905	MGP_PahariEiJ_G0021074	-	95	46.905	Mus_pahari
ENSPLAG00000006675	nop53	89	47.552	MGP_SPRETEiJ_G0030298	Nop53	88	47.552	Mus_spretus
ENSPLAG00000006675	nop53	97	45.781	ENSMPUG00000004456	NOP53	88	47.235	Mustela_putorius_furo
ENSPLAG00000006675	nop53	51	66.964	ENSMLUG00000027066	-	99	50.752	Myotis_lucifugus
ENSPLAG00000006675	nop53	97	46.581	ENSNGAG00000019894	Nop53	88	48.148	Nannospalax_galili
ENSPLAG00000006675	nop53	99	67.672	ENSNBRG00000002057	nop53	93	69.128	Neolamprologus_brichardi
ENSPLAG00000006675	nop53	90	38.041	ENSNLEG00000028326	-	89	40.447	Nomascus_leucogenys
ENSPLAG00000006675	nop53	89	49.415	ENSNLEG00000003143	NOP53	87	49.415	Nomascus_leucogenys
ENSPLAG00000006675	nop53	76	42.896	ENSMEUG00000002525	-	99	41.918	Notamacropus_eugenii
ENSPLAG00000006675	nop53	89	48.409	ENSODEG00000006707	NOP53	88	49.074	Octodon_degus
ENSPLAG00000006675	nop53	100	77.137	ENSONIG00000016624	nop53	100	76.923	Oreochromis_niloticus
ENSPLAG00000006675	nop53	100	71.855	ENSORLG00000008659	nop53	100	71.642	Oryzias_latipes
ENSPLAG00000006675	nop53	100	69.510	ENSORLG00020019916	nop53	97	69.296	Oryzias_latipes_hni
ENSPLAG00000006675	nop53	100	74.468	ENSORLG00015001315	nop53	100	74.468	Oryzias_latipes_hsok
ENSPLAG00000006675	nop53	97	75.435	ENSOMEG00000018244	nop53	100	75.424	Oryzias_melastigma
ENSPLAG00000006675	nop53	88	36.512	ENSOARG00000011414	NOP53	87	34.633	Ovis_aries
ENSPLAG00000006675	nop53	97	42.004	ENSPPAG00000029337	-	87	42.657	Pan_paniscus
ENSPLAG00000006675	nop53	89	42.723	ENSPPAG00000032995	-	86	42.019	Pan_paniscus
ENSPLAG00000006675	nop53	89	47.775	ENSPPAG00000002927	-	87	47.775	Pan_paniscus
ENSPLAG00000006675	nop53	89	47.696	ENSPPRG00000008954	NOP53	88	47.235	Panthera_pardus
ENSPLAG00000006675	nop53	89	46.495	ENSPTRG00000043520	-	87	46.495	Pan_troglodytes
ENSPLAG00000006675	nop53	97	42.857	ENSPTRG00000052493	-	87	43.590	Pan_troglodytes
ENSPLAG00000006675	nop53	89	49.415	ENSPTRG00000011215	NOP53	87	49.415	Pan_troglodytes
ENSPLAG00000006675	nop53	89	49.180	ENSPANG00000002964	NOP53	87	49.180	Papio_anubis
ENSPLAG00000006675	nop53	99	60.171	ENSPKIG00000000127	nop53	99	60.385	Paramormyrops_kingsleyae
ENSPLAG00000006675	nop53	100	69.427	ENSPMGG00000021579	nop53	100	69.427	Periophthalmus_magnuspinnatus
ENSPLAG00000006675	nop53	89	48.724	ENSPEMG00000006856	Nop53	88	48.724	Peromyscus_maniculatus_bairdii
ENSPLAG00000006675	nop53	50	41.176	ENSPMAG00000001501	-	88	41.176	Petromyzon_marinus
ENSPLAG00000006675	nop53	97	45.161	ENSPCIG00000016718	NOP53	88	45.921	Phascolarctos_cinereus
ENSPLAG00000006675	nop53	100	99.573	ENSPFOG00000002839	nop53	100	99.573	Poecilia_formosa
ENSPLAG00000006675	nop53	100	98.718	ENSPMEG00000009589	nop53	100	98.718	Poecilia_mexicana
ENSPLAG00000006675	nop53	60	98.940	ENSPMEG00000006978	nop53	88	98.940	Poecilia_mexicana
ENSPLAG00000006675	nop53	100	86.752	ENSPREG00000008711	nop53	100	86.538	Poecilia_reticulata
ENSPLAG00000006675	nop53	89	46.512	ENSPPYG00000010181	NOP53	87	46.495	Pongo_abelii
ENSPLAG00000006675	nop53	99	44.937	ENSPCAG00000007692	NOP53	89	46.572	Procavia_capensis
ENSPLAG00000006675	nop53	72	62.832	ENSPCOG00000016124	NOP53	79	64.151	Propithecus_coquereli
ENSPLAG00000006675	nop53	73	49.810	ENSPVAG00000014671	NOP53	72	49.810	Pteropus_vampyrus
ENSPLAG00000006675	nop53	100	77.137	ENSPNYG00000001341	nop53	100	76.496	Pundamilia_nyererei
ENSPLAG00000006675	nop53	99	63.113	ENSPNAG00000012520	nop53	99	62.737	Pygocentrus_nattereri
ENSPLAG00000006675	nop53	89	48.492	ENSRNOG00000013023	Nop53	88	48.492	Rattus_norvegicus
ENSPLAG00000006675	nop53	89	49.649	ENSRBIG00000036427	NOP53	87	49.649	Rhinopithecus_bieti
ENSPLAG00000006675	nop53	89	49.649	ENSRROG00000042298	NOP53	88	49.649	Rhinopithecus_roxellana
ENSPLAG00000006675	nop53	89	49.415	ENSSBOG00000033115	NOP53	87	49.415	Saimiri_boliviensis_boliviensis
ENSPLAG00000006675	nop53	85	47.101	ENSSHAG00000002239	NOP53	99	45.985	Sarcophilus_harrisii
ENSPLAG00000006675	nop53	100	63.889	ENSSFOG00015007062	gltscr2	100	63.889	Scleropages_formosus
ENSPLAG00000006675	nop53	100	73.248	ENSSMAG00000000212	nop53	100	73.461	Scophthalmus_maximus
ENSPLAG00000006675	nop53	100	77.137	ENSSDUG00000010575	nop53	100	77.564	Seriola_dumerili
ENSPLAG00000006675	nop53	100	74.786	ENSSLDG00000000140	nop53	97	75.214	Seriola_lalandi_dorsalis
ENSPLAG00000006675	nop53	72	48.276	ENSSARG00000014109	NOP53	72	48.266	Sorex_araneus
ENSPLAG00000006675	nop53	79	46.335	ENSSPUG00000004420	NOP53	83	46.719	Sphenodon_punctatus
ENSPLAG00000006675	nop53	100	78.632	ENSSPAG00000000318	nop53	100	78.205	Stegastes_partitus
ENSPLAG00000006675	nop53	89	47.281	ENSSSCG00000022774	NOP53	87	47.518	Sus_scrofa
ENSPLAG00000006675	nop53	100	73.077	ENSTRUG00000004944	nop53	100	73.077	Takifugu_rubripes
ENSPLAG00000006675	nop53	54	78.571	ENSTNIG00000014330	nop53	95	78.571	Tetraodon_nigroviridis
ENSPLAG00000006675	nop53	65	64.602	ENSTBEG00000008708	NOP53	63	65.094	Tupaia_belangeri
ENSPLAG00000006675	nop53	89	47.907	ENSTTRG00000011831	NOP53	88	47.674	Tursiops_truncatus
ENSPLAG00000006675	nop53	89	45.853	ENSUAMG00000028254	NOP53	88	46.083	Ursus_americanus
ENSPLAG00000006675	nop53	86	63.393	ENSXETG00000002782	nop53	91	48.712	Xenopus_tropicalis
ENSPLAG00000006675	nop53	100	91.667	ENSXCOG00000004436	nop53	100	91.026	Xiphophorus_couchianus
ENSPLAG00000006675	nop53	100	94.231	ENSXMAG00000002589	nop53	100	93.590	Xiphophorus_maculatus