EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006711 (Gene tree)
Gene ID: 106950437
Gene Symbol: snrnp200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 11940 bases
Position: chrKQ545715.1:303804-315743
Accession: 106950437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004842	ResIII	PF04851.15	1.5e-25	1	2
ENSPLAP00000004842	ResIII	PF04851.15	1.5e-25	2	2
ENSPLAP00000004842	DEAD	PF00270.29	3e-53	1	2
ENSPLAP00000004842	DEAD	PF00270.29	3e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000008944	-	5526	XM_015037297	ENSPLAP00000004842	1841 (aa)	XP_014892783	-

Gene Model

Click here to download ENSPLAG00000006711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006711	snrnp200	72	32.014	ENSPLAG00000000571	hfm1	71	32.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006711	snrnp200	99	90.220	ENSG00000144028	SNRNP200	97	90.220	Homo_sapiens
ENSPLAG00000006711	snrnp200	99	97.305	ENSAPOG00000010223	snrnp200	97	97.305	Acanthochromis_polyacanthus
ENSPLAG00000006711	snrnp200	99	90.275	ENSAMEG00000008996	SNRNP200	97	90.275	Ailuropoda_melanoleuca
ENSPLAG00000006711	snrnp200	99	96.810	ENSACIG00000001764	snrnp200	97	96.810	Amphilophus_citrinellus
ENSPLAG00000006711	snrnp200	99	97.085	ENSAOCG00000024593	snrnp200	99	96.590	Amphiprion_ocellaris
ENSPLAG00000006711	snrnp200	99	96.700	ENSAPEG00000012554	snrnp200	99	96.700	Amphiprion_percula
ENSPLAG00000006711	snrnp200	99	97.195	ENSATEG00000022522	snrnp200	97	97.195	Anabas_testudineus
ENSPLAG00000006711	snrnp200	99	90.549	ENSAPLG00000004313	SNRNP200	98	90.549	Anas_platyrhynchos
ENSPLAG00000006711	snrnp200	99	89.982	ENSACAG00000000434	SNRNP200	97	89.982	Anolis_carolinensis
ENSPLAG00000006711	snrnp200	99	86.192	ENSANAG00000036625	SNRNP200	97	85.973	Aotus_nancymaae
ENSPLAG00000006711	snrnp200	99	96.920	ENSACLG00000011188	snrnp200	97	96.920	Astatotilapia_calliptera
ENSPLAG00000006711	snrnp200	99	94.169	ENSAMXG00000005684	snrnp200	97	94.169	Astyanax_mexicanus
ENSPLAG00000006711	snrnp200	99	90.000	ENSBTAG00000000848	SNRNP200	97	90.000	Bos_taurus
ENSPLAG00000006711	snrnp200	99	90.220	ENSCJAG00000007514	SNRNP200	97	90.220	Callithrix_jacchus
ENSPLAG00000006711	snrnp200	99	89.327	ENSCAFG00020019979	SNRNP200	99	91.649	Canis_lupus_dingo
ENSPLAG00000006711	snrnp200	99	90.000	ENSCHIG00000020611	SNRNP200	97	90.000	Capra_hircus
ENSPLAG00000006711	snrnp200	99	90.275	ENSTSYG00000010467	SNRNP200	97	90.275	Carlito_syrichta
ENSPLAG00000006711	snrnp200	99	89.808	ENSCAPG00000017234	SNRNP200	98	89.808	Cavia_aperea
ENSPLAG00000006711	snrnp200	99	90.055	ENSCPOG00000006776	SNRNP200	97	90.055	Cavia_porcellus
ENSPLAG00000006711	snrnp200	99	90.220	ENSCCAG00000033962	SNRNP200	97	90.220	Cebus_capucinus
ENSPLAG00000006711	snrnp200	99	90.220	ENSCATG00000015790	SNRNP200	97	90.220	Cercocebus_atys
ENSPLAG00000006711	snrnp200	99	90.055	ENSCLAG00000004116	SNRNP200	97	90.055	Chinchilla_lanigera
ENSPLAG00000006711	snrnp200	99	90.220	ENSCSAG00000017369	SNRNP200	97	90.220	Chlorocebus_sabaeus
ENSPLAG00000006711	snrnp200	74	92.105	ENSCHOG00000012981	-	55	92.105	Choloepus_hoffmanni
ENSPLAG00000006711	snrnp200	99	90.346	ENSCPBG00000022571	SNRNP200	97	90.346	Chrysemys_picta_bellii
ENSPLAG00000006711	snrnp200	99	76.287	ENSCING00000005082	-	97	76.396	Ciona_intestinalis
ENSPLAG00000006711	snrnp200	95	90.080	ENSCANG00000033932	SNRNP200	99	90.080	Colobus_angolensis_palliatus
ENSPLAG00000006711	snrnp200	99	90.220	ENSCGRG00001022610	Snrnp200	97	90.220	Cricetulus_griseus_chok1gshd
ENSPLAG00000006711	snrnp200	99	89.879	ENSCGRG00000016472	Snrnp200	97	89.879	Cricetulus_griseus_crigri
ENSPLAG00000006711	snrnp200	99	95.875	ENSCSEG00000016399	snrnp200	97	95.875	Cynoglossus_semilaevis
ENSPLAG00000006711	snrnp200	99	92.574	ENSCVAG00000017631	snrnp200	97	92.574	Cyprinodon_variegatus
ENSPLAG00000006711	snrnp200	99	94.279	ENSDARG00000077536	snrnp200	97	94.279	Danio_rerio
ENSPLAG00000006711	snrnp200	99	88.626	ENSDNOG00000011227	SNRNP200	97	88.626	Dasypus_novemcinctus
ENSPLAG00000006711	snrnp200	99	87.336	ENSDORG00000005861	Snrnp200	97	87.336	Dipodomys_ordii
ENSPLAG00000006711	snrnp200	99	73.016	FBgn0263599	l(3)72Ab	97	73.016	Drosophila_melanogaster
ENSPLAG00000006711	snrnp200	93	94.375	ENSETEG00000000162	SNRNP200	67	94.375	Echinops_telfairi
ENSPLAG00000006711	snrnp200	83	81.166	ENSEBUG00000016524	snrnp200	95	81.166	Eptatretus_burgeri
ENSPLAG00000006711	snrnp200	99	89.010	ENSEASG00005001884	SNRNP200	97	88.901	Equus_asinus_asinus
ENSPLAG00000006711	snrnp200	99	90.220	ENSECAG00000019675	SNRNP200	97	90.220	Equus_caballus
ENSPLAG00000006711	snrnp200	90	88.862	ENSEEUG00000012178	SNRNP200	89	88.882	Erinaceus_europaeus
ENSPLAG00000006711	snrnp200	99	95.547	ENSELUG00000018948	snrnp200	97	95.547	Esox_lucius
ENSPLAG00000006711	snrnp200	99	90.275	ENSFCAG00000010699	SNRNP200	97	90.275	Felis_catus
ENSPLAG00000006711	snrnp200	93	84.663	ENSFALG00000001368	-	93	84.663	Ficedula_albicollis
ENSPLAG00000006711	snrnp200	99	90.055	ENSFDAG00000004683	SNRNP200	97	90.055	Fukomys_damarensis
ENSPLAG00000006711	snrnp200	99	96.095	ENSFHEG00000003786	snrnp200	97	96.095	Fundulus_heteroclitus
ENSPLAG00000006711	snrnp200	99	94.725	ENSGMOG00000004881	snrnp200	97	94.560	Gadus_morhua
ENSPLAG00000006711	snrnp200	99	96.480	ENSGAFG00000010807	snrnp200	97	96.480	Gambusia_affinis
ENSPLAG00000006711	snrnp200	99	96.925	ENSGACG00000011474	snrnp200	97	96.925	Gasterosteus_aculeatus
ENSPLAG00000006711	snrnp200	91	92.704	ENSGAGG00000016069	SNRNP200	96	90.655	Gopherus_agassizii
ENSPLAG00000006711	snrnp200	99	90.220	ENSGGOG00000005174	SNRNP200	97	92.560	Gorilla_gorilla
ENSPLAG00000006711	snrnp200	99	94.134	ENSHBUG00000011322	snrnp200	99	94.134	Haplochromis_burtoni
ENSPLAG00000006711	snrnp200	99	90.055	ENSHGLG00000006654	SNRNP200	97	90.055	Heterocephalus_glaber_female
ENSPLAG00000006711	snrnp200	99	90.055	ENSHGLG00100018594	SNRNP200	97	90.055	Heterocephalus_glaber_male
ENSPLAG00000006711	snrnp200	99	90.275	ENSSTOG00000016351	SNRNP200	97	90.275	Ictidomys_tridecemlineatus
ENSPLAG00000006711	snrnp200	99	90.055	ENSJJAG00000023659	Snrnp200	97	90.055	Jaculus_jaculus
ENSPLAG00000006711	snrnp200	99	94.466	ENSKMAG00000003665	snrnp200	97	94.466	Kryptolebias_marmoratus
ENSPLAG00000006711	snrnp200	99	97.250	ENSLBEG00000021585	snrnp200	97	97.250	Labrus_bergylta
ENSPLAG00000006711	snrnp200	80	92.152	ENSLACG00000000226	SNRNP200	99	92.152	Latimeria_chalumnae
ENSPLAG00000006711	snrnp200	99	93.407	ENSLOCG00000015198	snrnp200	97	93.407	Lepisosteus_oculatus
ENSPLAG00000006711	snrnp200	99	89.945	ENSLAFG00000015626	SNRNP200	97	89.945	Loxodonta_africana
ENSPLAG00000006711	snrnp200	99	90.165	ENSMFAG00000040174	SNRNP200	99	92.151	Macaca_fascicularis
ENSPLAG00000006711	snrnp200	99	90.165	ENSMMUG00000023261	SNRNP200	97	90.165	Macaca_mulatta
ENSPLAG00000006711	snrnp200	99	90.110	ENSMNEG00000032398	SNRNP200	97	90.110	Macaca_nemestrina
ENSPLAG00000006711	snrnp200	99	90.220	ENSMLEG00000019083	SNRNP200	99	92.151	Mandrillus_leucophaeus
ENSPLAG00000006711	snrnp200	99	96.207	ENSMAMG00000007851	snrnp200	97	96.152	Mastacembelus_armatus
ENSPLAG00000006711	snrnp200	99	94.134	ENSMZEG00005010787	snrnp200	99	94.134	Maylandia_zebra
ENSPLAG00000006711	snrnp200	98	90.233	ENSMGAG00000001831	SNRNP200	99	90.240	Meleagris_gallopavo
ENSPLAG00000006711	snrnp200	99	90.275	ENSMAUG00000011825	Snrnp200	97	90.275	Mesocricetus_auratus
ENSPLAG00000006711	snrnp200	99	90.275	ENSMICG00000004710	SNRNP200	98	91.831	Microcebus_murinus
ENSPLAG00000006711	snrnp200	99	88.187	ENSMOCG00000011814	Snrnp200	97	88.187	Microtus_ochrogaster
ENSPLAG00000006711	snrnp200	99	94.609	ENSMMOG00000014167	snrnp200	97	94.609	Mola_mola
ENSPLAG00000006711	snrnp200	99	90.330	ENSMODG00000008475	SNRNP200	97	90.330	Monodelphis_domestica
ENSPLAG00000006711	snrnp200	99	96.700	ENSMALG00000001973	snrnp200	97	96.700	Monopterus_albus
ENSPLAG00000006711	snrnp200	99	90.165	MGP_CAROLIEiJ_G0024250	Snrnp200	97	90.165	Mus_caroli
ENSPLAG00000006711	snrnp200	99	90.165	ENSMUSG00000003660	Snrnp200	97	90.165	Mus_musculus
ENSPLAG00000006711	snrnp200	99	90.165	MGP_PahariEiJ_G0025695	Snrnp200	97	90.165	Mus_pahari
ENSPLAG00000006711	snrnp200	99	90.165	MGP_SPRETEiJ_G0025170	Snrnp200	96	92.784	Mus_spretus
ENSPLAG00000006711	snrnp200	99	90.220	ENSMPUG00000008949	SNRNP200	97	90.220	Mustela_putorius_furo
ENSPLAG00000006711	snrnp200	99	89.632	ENSMLUG00000010493	SNRNP200	97	89.632	Myotis_lucifugus
ENSPLAG00000006711	snrnp200	99	87.033	ENSMLUG00000027511	-	97	87.033	Myotis_lucifugus
ENSPLAG00000006711	snrnp200	99	90.220	ENSNGAG00000021993	Snrnp200	97	90.220	Nannospalax_galili
ENSPLAG00000006711	snrnp200	91	96.776	ENSNBRG00000017960	snrnp200	97	96.776	Neolamprologus_brichardi
ENSPLAG00000006711	snrnp200	99	85.232	ENSNLEG00000000025	SNRNP200	97	85.286	Nomascus_leucogenys
ENSPLAG00000006711	snrnp200	99	89.172	ENSMEUG00000010532	SNRNP200	71	89.172	Notamacropus_eugenii
ENSPLAG00000006711	snrnp200	97	89.056	ENSOPRG00000015464	SNRNP200	96	89.069	Ochotona_princeps
ENSPLAG00000006711	snrnp200	99	90.000	ENSODEG00000008366	SNRNP200	97	90.000	Octodon_degus
ENSPLAG00000006711	snrnp200	99	96.975	ENSONIG00000010714	snrnp200	97	96.975	Oreochromis_niloticus
ENSPLAG00000006711	snrnp200	99	90.165	ENSOCUG00000009864	SNRNP200	97	90.165	Oryctolagus_cuniculus
ENSPLAG00000006711	snrnp200	99	96.480	ENSORLG00000012286	snrnp200	99	96.641	Oryzias_latipes
ENSPLAG00000006711	snrnp200	99	96.700	ENSORLG00020004648	snrnp200	97	96.700	Oryzias_latipes_hni
ENSPLAG00000006711	snrnp200	99	96.590	ENSORLG00015019114	snrnp200	99	96.605	Oryzias_latipes_hsok
ENSPLAG00000006711	snrnp200	99	96.755	ENSOMEG00000011834	snrnp200	97	96.755	Oryzias_melastigma
ENSPLAG00000006711	snrnp200	99	90.275	ENSOGAG00000006879	SNRNP200	97	90.275	Otolemur_garnettii
ENSPLAG00000006711	snrnp200	99	89.676	ENSOARG00000013949	SNRNP200	97	89.676	Ovis_aries
ENSPLAG00000006711	snrnp200	99	90.220	ENSPPAG00000041559	SNRNP200	97	90.220	Pan_paniscus
ENSPLAG00000006711	snrnp200	99	90.275	ENSPPRG00000004435	SNRNP200	97	90.275	Panthera_pardus
ENSPLAG00000006711	snrnp200	99	89.780	ENSPTIG00000006380	SNRNP200	97	89.780	Panthera_tigris_altaica
ENSPLAG00000006711	snrnp200	99	90.220	ENSPTRG00000012230	SNRNP200	97	90.220	Pan_troglodytes
ENSPLAG00000006711	snrnp200	99	90.165	ENSPANG00000006017	SNRNP200	97	90.165	Papio_anubis
ENSPLAG00000006711	snrnp200	99	94.612	ENSPKIG00000014762	snrnp200	99	94.796	Paramormyrops_kingsleyae
ENSPLAG00000006711	snrnp200	99	89.347	ENSPSIG00000008580	SNRNP200	97	89.347	Pelodiscus_sinensis
ENSPLAG00000006711	snrnp200	99	90.110	ENSPCIG00000023050	SNRNP200	97	90.110	Phascolarctos_cinereus
ENSPLAG00000006711	snrnp200	99	99.780	ENSPFOG00000015110	snrnp200	97	99.780	Poecilia_formosa
ENSPLAG00000006711	snrnp200	100	99.565	ENSPMEG00000021166	snrnp200	100	99.565	Poecilia_mexicana
ENSPLAG00000006711	snrnp200	99	99.560	ENSPREG00000008875	snrnp200	97	99.560	Poecilia_reticulata
ENSPLAG00000006711	snrnp200	99	90.220	ENSPPYG00000012068	SNRNP200	97	90.220	Pongo_abelii
ENSPLAG00000006711	snrnp200	96	95.513	ENSPCAG00000008536	SNRNP200	83	95.513	Procavia_capensis
ENSPLAG00000006711	snrnp200	99	90.220	ENSPCOG00000024608	SNRNP200	97	90.220	Propithecus_coquereli
ENSPLAG00000006711	snrnp200	94	90.028	ENSPVAG00000005860	SNRNP200	89	90.028	Pteropus_vampyrus
ENSPLAG00000006711	snrnp200	99	91.338	ENSPNYG00000017476	snrnp200	97	91.338	Pundamilia_nyererei
ENSPLAG00000006711	snrnp200	99	89.005	ENSPNAG00000010998	snrnp200	97	89.005	Pygocentrus_nattereri
ENSPLAG00000006711	snrnp200	99	90.275	ENSRNOG00000012157	Snrnp200	97	90.275	Rattus_norvegicus
ENSPLAG00000006711	snrnp200	99	90.220	ENSRBIG00000044690	-	97	90.220	Rhinopithecus_bieti
ENSPLAG00000006711	snrnp200	99	90.220	ENSRROG00000037952	-	97	90.220	Rhinopithecus_roxellana
ENSPLAG00000006711	snrnp200	99	90.220	ENSSBOG00000035471	SNRNP200	97	92.330	Saimiri_boliviensis_boliviensis
ENSPLAG00000006711	snrnp200	98	90.122	ENSSHAG00000000758	SNRNP200	99	90.128	Sarcophilus_harrisii
ENSPLAG00000006711	snrnp200	99	94.502	ENSSFOG00015018826	snrnp200	97	94.502	Scleropages_formosus
ENSPLAG00000006711	snrnp200	99	96.920	ENSSMAG00000005463	snrnp200	98	96.920	Scophthalmus_maximus
ENSPLAG00000006711	snrnp200	99	97.415	ENSSDUG00000021410	snrnp200	97	97.415	Seriola_dumerili
ENSPLAG00000006711	snrnp200	99	97.470	ENSSLDG00000010884	snrnp200	97	97.470	Seriola_lalandi_dorsalis
ENSPLAG00000006711	snrnp200	94	86.957	ENSSARG00000010728	SNRNP200	92	86.916	Sorex_araneus
ENSPLAG00000006711	snrnp200	99	90.719	ENSSPUG00000003726	-	97	90.719	Sphenodon_punctatus
ENSPLAG00000006711	snrnp200	99	97.415	ENSSPAG00000001842	snrnp200	98	97.415	Stegastes_partitus
ENSPLAG00000006711	snrnp200	99	90.330	ENSSSCG00000008127	SNRNP200	99	90.330	Sus_scrofa
ENSPLAG00000006711	snrnp200	99	82.309	ENSTGUG00000014475	-	98	82.309	Taeniopygia_guttata
ENSPLAG00000006711	snrnp200	99	95.985	ENSTRUG00000001307	snrnp200	97	95.985	Takifugu_rubripes
ENSPLAG00000006711	snrnp200	99	91.250	ENSTNIG00000004320	snrnp200	97	81.898	Tetraodon_nigroviridis
ENSPLAG00000006711	snrnp200	80	93.897	ENSTBEG00000003329	-	54	93.897	Tupaia_belangeri
ENSPLAG00000006711	snrnp200	99	90.055	ENSTTRG00000004983	SNRNP200	97	90.055	Tursiops_truncatus
ENSPLAG00000006711	snrnp200	85	82.569	ENSUAMG00000008395	-	91	82.569	Ursus_americanus
ENSPLAG00000006711	snrnp200	99	90.275	ENSUMAG00000012385	SNRNP200	97	90.275	Ursus_maritimus
ENSPLAG00000006711	snrnp200	81	94.595	ENSVPAG00000006434	SNRNP200	53	94.595	Vicugna_pacos
ENSPLAG00000006711	snrnp200	99	90.275	ENSVVUG00000026247	SNRNP200	99	90.275	Vulpes_vulpes
ENSPLAG00000006711	snrnp200	99	90.159	ENSXETG00000001243	snrnp200	97	90.159	Xenopus_tropicalis
ENSPLAG00000006711	snrnp200	99	99.505	ENSXMAG00000002058	snrnp200	97	99.505	Xiphophorus_maculatus