EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006948 (Gene tree)
Gene ID: 106961936
Gene Symbol: alyref
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 4622 bases
Position: chrKQ546666.1:159627-164248
Accession: 106961936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000005101	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000008513	-	2025	XM_015056053	ENSPLAP00000005101	270 (aa)	XP_014911539	UPI00072E0141

Gene Model

Click here to download ENSPLAG00000006948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006948	alyref	100	49.817	ENSPLAG00000014380	-	100	45.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006948	alyref	100	53.261	ENSAPOG00000000183	-	100	52.899	Acanthochromis_polyacanthus
ENSPLAG00000006948	alyref	100	48.829	ENSACIG00000020351	-	100	52.069	Amphilophus_citrinellus
ENSPLAG00000006948	alyref	99	76.923	ENSACIG00000006351	alyref	98	76.364	Amphilophus_citrinellus
ENSPLAG00000006948	alyref	100	79.348	ENSAOCG00000014012	alyref	100	80.435	Amphiprion_ocellaris
ENSPLAG00000006948	alyref	100	53.650	ENSAOCG00000019305	-	100	52.920	Amphiprion_ocellaris
ENSPLAG00000006948	alyref	100	79.348	ENSAPEG00000014603	alyref	100	80.435	Amphiprion_percula
ENSPLAG00000006948	alyref	100	54.745	ENSAPEG00000013527	-	100	52.920	Amphiprion_percula
ENSPLAG00000006948	alyref	100	76.429	ENSATEG00000004307	alyref	100	79.286	Anabas_testudineus
ENSPLAG00000006948	alyref	100	58.182	ENSATEG00000000382	-	100	57.818	Anabas_testudineus
ENSPLAG00000006948	alyref	100	54.064	ENSACLG00000010184	-	100	55.088	Astatotilapia_calliptera
ENSPLAG00000006948	alyref	100	81.227	ENSACLG00000008432	alyref	100	81.949	Astatotilapia_calliptera
ENSPLAG00000006948	alyref	100	73.214	ENSAMXG00000007359	alyref	100	74.286	Astyanax_mexicanus
ENSPLAG00000006948	alyref	99	44.964	ENSCING00000013568	-	99	44.128	Ciona_intestinalis
ENSPLAG00000006948	alyref	99	47.015	ENSCSAVG00000003324	-	99	42.435	Ciona_savignyi
ENSPLAG00000006948	alyref	100	78.339	ENSCSEG00000017800	alyref	100	79.783	Cynoglossus_semilaevis
ENSPLAG00000006948	alyref	100	50.183	ENSCVAG00000007789	-	100	45.652	Cyprinodon_variegatus
ENSPLAG00000006948	alyref	100	81.319	ENSCVAG00000014869	alyref	100	84.249	Cyprinodon_variegatus
ENSPLAG00000006948	alyref	100	77.857	ENSDARG00000077732	alyref	100	77.500	Danio_rerio
ENSPLAG00000006948	alyref	97	43.972	FBgn0010774	Ref1	65	49.444	Drosophila_melanogaster
ENSPLAG00000006948	alyref	70	46.907	ENSEBUG00000006305	alyref	100	39.643	Eptatretus_burgeri
ENSPLAG00000006948	alyref	99	52.060	ENSEBUG00000008253	alyref	95	52.941	Eptatretus_burgeri
ENSPLAG00000006948	alyref	100	65.371	ENSELUG00000008849	-	100	65.724	Esox_lucius
ENSPLAG00000006948	alyref	100	73.260	ENSELUG00000017178	alyref	100	70.073	Esox_lucius
ENSPLAG00000006948	alyref	57	75.949	ENSFALG00000011923	-	96	72.727	Ficedula_albicollis
ENSPLAG00000006948	alyref	100	49.451	ENSFHEG00000004698	-	100	47.445	Fundulus_heteroclitus
ENSPLAG00000006948	alyref	100	82.593	ENSFHEG00000019426	alyref	100	81.985	Fundulus_heteroclitus
ENSPLAG00000006948	alyref	100	70.438	ENSGMOG00000009882	alyref	100	67.153	Gadus_morhua
ENSPLAG00000006948	alyref	67	56.716	ENSGMOG00000013122	-	100	58.763	Gadus_morhua
ENSPLAG00000006948	alyref	100	48.014	ENSGAFG00000007573	-	100	46.545	Gambusia_affinis
ENSPLAG00000006948	alyref	100	98.519	ENSGAFG00000006014	alyref	100	98.519	Gambusia_affinis
ENSPLAG00000006948	alyref	100	81.227	ENSHBUG00000020196	alyref	100	81.949	Haplochromis_burtoni
ENSPLAG00000006948	alyref	100	56.294	ENSHBUG00000001454	-	100	55.052	Haplochromis_burtoni
ENSPLAG00000006948	alyref	98	49.451	ENSHCOG00000012825	-	94	47.619	Hippocampus_comes
ENSPLAG00000006948	alyref	100	74.275	ENSIPUG00000009469	alyref	100	70.652	Ictalurus_punctatus
ENSPLAG00000006948	alyref	73	65.482	ENSSTOG00000016570	-	92	62.567	Ictidomys_tridecemlineatus
ENSPLAG00000006948	alyref	100	53.285	ENSKMAG00000006462	-	100	51.460	Kryptolebias_marmoratus
ENSPLAG00000006948	alyref	100	77.899	ENSKMAG00000008912	alyref	100	79.348	Kryptolebias_marmoratus
ENSPLAG00000006948	alyref	99	47.826	ENSLBEG00000012930	-	99	48.921	Labrus_bergylta
ENSPLAG00000006948	alyref	100	80.364	ENSLBEG00000023118	alyref	90	83.636	Labrus_bergylta
ENSPLAG00000006948	alyref	100	48.288	ENSLBEG00000005387	-	100	47.959	Labrus_bergylta
ENSPLAG00000006948	alyref	76	68.519	ENSLOCG00000013879	alyref	89	67.442	Lepisosteus_oculatus
ENSPLAG00000006948	alyref	100	79.783	ENSMAMG00000003034	alyref	100	80.144	Mastacembelus_armatus
ENSPLAG00000006948	alyref	100	50.523	ENSMAMG00000005464	-	100	50.177	Mastacembelus_armatus
ENSPLAG00000006948	alyref	100	53.710	ENSMZEG00005012096	-	100	54.737	Maylandia_zebra
ENSPLAG00000006948	alyref	100	81.227	ENSMZEG00005008639	alyref	100	81.949	Maylandia_zebra
ENSPLAG00000006948	alyref	99	80.000	ENSMMOG00000012458	alyref	97	78.022	Mola_mola
ENSPLAG00000006948	alyref	99	49.451	ENSMMOG00000007032	-	98	44.523	Mola_mola
ENSPLAG00000006948	alyref	100	50.847	ENSMALG00000006054	-	100	48.966	Monopterus_albus
ENSPLAG00000006948	alyref	98	52.878	ENSMLUG00000009247	-	77	56.872	Myotis_lucifugus
ENSPLAG00000006948	alyref	100	55.319	ENSMLUG00000006521	-	100	53.047	Myotis_lucifugus
ENSPLAG00000006948	alyref	100	55.197	ENSMLUG00000004098	-	100	53.405	Myotis_lucifugus
ENSPLAG00000006948	alyref	98	56.364	ENSMLUG00000030671	-	99	53.285	Myotis_lucifugus
ENSPLAG00000006948	alyref	98	54.152	ENSMLUG00000028605	-	98	53.430	Myotis_lucifugus
ENSPLAG00000006948	alyref	98	55.762	ENSMLUG00000022178	-	98	54.647	Myotis_lucifugus
ENSPLAG00000006948	alyref	100	53.472	ENSMLUG00000014372	-	100	54.480	Myotis_lucifugus
ENSPLAG00000006948	alyref	98	55.357	ENSMLUG00000022467	-	98	50.179	Myotis_lucifugus
ENSPLAG00000006948	alyref	100	67.159	ENSNGAG00000022014	-	100	61.993	Nannospalax_galili
ENSPLAG00000006948	alyref	100	54.804	ENSNBRG00000017460	-	100	55.830	Neolamprologus_brichardi
ENSPLAG00000006948	alyref	100	81.588	ENSNBRG00000001747	alyref	100	81.588	Neolamprologus_brichardi
ENSPLAG00000006948	alyref	100	78.571	ENSONIG00000019434	alyref	100	80.000	Oreochromis_niloticus
ENSPLAG00000006948	alyref	100	56.989	ENSONIG00000003296	-	100	58.214	Oreochromis_niloticus
ENSPLAG00000006948	alyref	99	40.881	ENSORLG00000001620	-	60	46.460	Oryzias_latipes
ENSPLAG00000006948	alyref	100	81.250	ENSORLG00020011942	alyref	100	84.191	Oryzias_latipes_hni
ENSPLAG00000006948	alyref	100	48.551	ENSORLG00020015673	-	99	47.292	Oryzias_latipes_hni
ENSPLAG00000006948	alyref	100	83.824	ENSORLG00015022664	alyref	100	83.824	Oryzias_latipes_hsok
ENSPLAG00000006948	alyref	100	47.500	ENSORLG00015015143	-	99	45.205	Oryzias_latipes_hsok
ENSPLAG00000006948	alyref	99	51.673	ENSOMEG00000007158	-	97	48.519	Oryzias_melastigma
ENSPLAG00000006948	alyref	100	83.395	ENSOMEG00000019176	alyref	100	86.347	Oryzias_melastigma
ENSPLAG00000006948	alyref	68	72.432	ENSPPAG00000036403	-	68	70.811	Pan_paniscus
ENSPLAG00000006948	alyref	100	72.628	ENSPKIG00000007070	alyref	100	70.073	Paramormyrops_kingsleyae
ENSPLAG00000006948	alyref	99	72.527	ENSPKIG00000006233	-	81	68.613	Paramormyrops_kingsleyae
ENSPLAG00000006948	alyref	74	48.241	ENSPMGG00000012994	-	70	58.065	Periophthalmus_magnuspinnatus
ENSPLAG00000006948	alyref	99	76.384	ENSPMGG00000016600	alyref	91	78.832	Periophthalmus_magnuspinnatus
ENSPLAG00000006948	alyref	100	62.094	ENSPEMG00000016628	-	100	61.624	Peromyscus_maniculatus_bairdii
ENSPLAG00000006948	alyref	100	49.817	ENSPFOG00000017094	-	100	45.985	Poecilia_formosa
ENSPLAG00000006948	alyref	100	99.631	ENSPFOG00000022825	alyref	99	99.631	Poecilia_formosa
ENSPLAG00000006948	alyref	100	99.631	ENSPMEG00000003547	alyref	100	99.631	Poecilia_mexicana
ENSPLAG00000006948	alyref	100	49.817	ENSPMEG00000023039	-	100	45.985	Poecilia_mexicana
ENSPLAG00000006948	alyref	100	98.889	ENSPREG00000015795	alyref	100	98.889	Poecilia_reticulata
ENSPLAG00000006948	alyref	100	50.923	ENSPREG00000003649	-	100	47.426	Poecilia_reticulata
ENSPLAG00000006948	alyref	99	49.825	ENSPNYG00000002879	-	98	52.688	Pundamilia_nyererei
ENSPLAG00000006948	alyref	100	81.227	ENSPNYG00000017498	alyref	100	81.949	Pundamilia_nyererei
ENSPLAG00000006948	alyref	100	75.090	ENSPNAG00000002531	alyref	100	72.563	Pygocentrus_nattereri
ENSPLAG00000006948	alyref	71	70.769	ENSSBOG00000030924	-	87	69.588	Saimiri_boliviensis_boliviensis
ENSPLAG00000006948	alyref	99	54.015	ENSSHAG00000012866	-	78	58.252	Sarcophilus_harrisii
ENSPLAG00000006948	alyref	99	55.636	ENSSHAG00000000609	-	99	53.333	Sarcophilus_harrisii
ENSPLAG00000006948	alyref	76	76.442	ENSSFOG00015003923	alyref	73	75.120	Scleropages_formosus
ENSPLAG00000006948	alyref	68	73.404	ENSSFOG00015003678	alyref	83	72.432	Scleropages_formosus
ENSPLAG00000006948	alyref	100	80.727	ENSSMAG00000009283	alyref	100	79.273	Scophthalmus_maximus
ENSPLAG00000006948	alyref	100	53.169	ENSSMAG00000011169	-	100	55.665	Scophthalmus_maximus
ENSPLAG00000006948	alyref	100	79.348	ENSSDUG00000016158	alyref	100	80.072	Seriola_dumerili
ENSPLAG00000006948	alyref	100	78.339	ENSSLDG00000017803	alyref	100	79.061	Seriola_lalandi_dorsalis
ENSPLAG00000006948	alyref	99	54.745	ENSSPAG00000017028	-	96	54.380	Stegastes_partitus
ENSPLAG00000006948	alyref	100	51.220	ENSTRUG00000003051	-	100	48.951	Takifugu_rubripes
ENSPLAG00000006948	alyref	100	73.022	ENSTNIG00000011595	alyref	100	71.583	Tetraodon_nigroviridis
ENSPLAG00000006948	alyref	100	50.183	ENSTNIG00000014136	-	100	46.520	Tetraodon_nigroviridis
ENSPLAG00000006948	alyref	69	73.016	ENSVVUG00000000272	-	82	71.809	Vulpes_vulpes
ENSPLAG00000006948	alyref	100	96.296	ENSXCOG00000018047	alyref	99	96.296	Xiphophorus_couchianus
ENSPLAG00000006948	alyref	100	96.667	ENSXMAG00000012218	alyref	99	96.667	Xiphophorus_maculatus
ENSPLAG00000006948	alyref	100	49.451	ENSXMAG00000018086	-	100	47.080	Xiphophorus_maculatus