EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000007055 (Gene tree)
Gene ID: 106945785
Gene Symbol: hdlbpb
Alias: -
Full Name: vigilin-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 24090 bases
Position: chrKQ545475.1:434370-458459
Accession: 106945785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	1	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	2	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	3	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	4	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	5	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	6	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	7	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	8	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	9	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	10	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	11	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	12	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	13	14
ENSPLAP00000005184	KH_1	PF00013.29	1.4e-188	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000008374	-	6465	XM_015029706	ENSPLAP00000005184	1268 (aa)	XP_014885192	UPI00072EEB28

Gene Model

Click here to download ENSPLAG00000007055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000007055	hdlbpb	96	72.049	ENSPLAG00000006033	hdlbpa	100	71.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000007055	hdlbpb	100	95.978	ENSAPOG00000006904	hdlbpb	100	95.978	Acanthochromis_polyacanthus
ENSPLAG00000007055	hdlbpb	100	90.659	ENSACIG00000016154	hdlbpb	100	90.659	Amphilophus_citrinellus
ENSPLAG00000007055	hdlbpb	100	96.609	ENSAOCG00000004083	hdlbpb	100	96.609	Amphiprion_ocellaris
ENSPLAG00000007055	hdlbpb	100	96.530	ENSAPEG00000012270	hdlbpb	100	96.530	Amphiprion_percula
ENSPLAG00000007055	hdlbpb	100	95.899	ENSATEG00000019877	hdlbpb	100	95.899	Anabas_testudineus
ENSPLAG00000007055	hdlbpb	100	82.256	ENSACAG00000003606	-	100	82.256	Anolis_carolinensis
ENSPLAG00000007055	hdlbpb	100	95.978	ENSACLG00000006618	hdlbpb	100	95.978	Astatotilapia_calliptera
ENSPLAG00000007055	hdlbpb	100	77.813	ENSAMXG00000019946	hdlbpb	100	77.813	Astyanax_mexicanus
ENSPLAG00000007055	hdlbpb	100	94.716	ENSCSEG00000000955	hdlbpb	100	94.716	Cynoglossus_semilaevis
ENSPLAG00000007055	hdlbpb	100	97.713	ENSCVAG00000005345	hdlbpb	100	97.713	Cyprinodon_variegatus
ENSPLAG00000007055	hdlbpb	99	85.556	ENSDARG00000061864	hdlbpb	99	85.556	Danio_rerio
ENSPLAG00000007055	hdlbpb	92	69.744	ENSEBUG00000005304	hdlbpb	96	69.573	Eptatretus_burgeri
ENSPLAG00000007055	hdlbpb	100	66.865	ENSELUG00000019925	hdlbpb	100	78.257	Esox_lucius
ENSPLAG00000007055	hdlbpb	87	34.768	ENSFHEG00000001701	hdlbpb	100	92.744	Fundulus_heteroclitus
ENSPLAG00000007055	hdlbpb	95	87.520	ENSGMOG00000004522	hdlbpb	78	87.520	Gadus_morhua
ENSPLAG00000007055	hdlbpb	100	98.975	ENSGAFG00000005278	hdlbpb	100	98.975	Gambusia_affinis
ENSPLAG00000007055	hdlbpb	99	91.792	ENSGACG00000019361	hdlbpb	100	92.028	Gasterosteus_aculeatus
ENSPLAG00000007055	hdlbpb	100	95.820	ENSHBUG00000018434	hdlbpb	100	95.820	Haplochromis_burtoni
ENSPLAG00000007055	hdlbpb	100	85.433	ENSIPUG00000003291	HDLBP	100	85.963	Ictalurus_punctatus
ENSPLAG00000007055	hdlbpb	100	96.767	ENSKMAG00000016562	hdlbpb	100	96.767	Kryptolebias_marmoratus
ENSPLAG00000007055	hdlbpb	100	95.347	ENSLBEG00000027855	hdlbpb	100	95.347	Labrus_bergylta
ENSPLAG00000007055	hdlbpb	100	85.075	ENSLACG00000007661	hdlbpb	92	85.075	Latimeria_chalumnae
ENSPLAG00000007055	hdlbpb	100	82.821	ENSLOCG00000013909	hdlbpb	100	82.821	Lepisosteus_oculatus
ENSPLAG00000007055	hdlbpb	100	96.215	ENSMAMG00000003035	hdlbpb	100	96.215	Mastacembelus_armatus
ENSPLAG00000007055	hdlbpb	100	95.978	ENSMZEG00005021465	hdlbpb	100	95.978	Maylandia_zebra
ENSPLAG00000007055	hdlbpb	100	94.164	ENSMMOG00000012525	hdlbpb	100	94.479	Mola_mola
ENSPLAG00000007055	hdlbpb	100	93.612	ENSMALG00000008938	hdlbpb	100	93.612	Monopterus_albus
ENSPLAG00000007055	hdlbpb	100	96.057	ENSNBRG00000002236	hdlbpb	100	96.057	Neolamprologus_brichardi
ENSPLAG00000007055	hdlbpb	100	95.820	ENSONIG00000009211	hdlbpb	100	95.820	Oreochromis_niloticus
ENSPLAG00000007055	hdlbpb	100	95.032	ENSORLG00000006581	hdlbpb	100	95.032	Oryzias_latipes
ENSPLAG00000007055	hdlbpb	100	95.110	ENSORLG00020010012	hdlbpb	100	95.110	Oryzias_latipes_hni
ENSPLAG00000007055	hdlbpb	100	95.268	ENSORLG00015006863	hdlbpb	100	95.268	Oryzias_latipes_hsok
ENSPLAG00000007055	hdlbpb	100	95.426	ENSOMEG00000011131	hdlbpb	100	95.426	Oryzias_melastigma
ENSPLAG00000007055	hdlbpb	100	88.644	ENSPKIG00000005966	hdlbpb	100	88.722	Paramormyrops_kingsleyae
ENSPLAG00000007055	hdlbpb	86	94.167	ENSPMGG00000019853	hdlbpb	99	94.167	Periophthalmus_magnuspinnatus
ENSPLAG00000007055	hdlbpb	92	64.570	ENSPMAG00000000249	-	99	64.423	Petromyzon_marinus
ENSPLAG00000007055	hdlbpb	94	74.452	ENSPMAG00000002131	hdlbpb	100	74.452	Petromyzon_marinus
ENSPLAG00000007055	hdlbpb	100	98.752	ENSPFOG00000008755	hdlbpb	100	98.752	Poecilia_formosa
ENSPLAG00000007055	hdlbpb	100	99.763	ENSPMEG00000001952	hdlbpb	100	99.763	Poecilia_mexicana
ENSPLAG00000007055	hdlbpb	100	99.369	ENSPREG00000012848	hdlbpb	100	99.369	Poecilia_reticulata
ENSPLAG00000007055	hdlbpb	100	95.820	ENSPNYG00000022467	hdlbpb	100	95.820	Pundamilia_nyererei
ENSPLAG00000007055	hdlbpb	100	87.539	ENSPNAG00000011104	hdlbpb	100	87.539	Pygocentrus_nattereri
ENSPLAG00000007055	hdlbpb	100	87.855	ENSSFOG00015023199	hdlbpb	100	87.855	Scleropages_formosus
ENSPLAG00000007055	hdlbpb	100	95.662	ENSSMAG00000008790	hdlbpb	100	95.662	Scophthalmus_maximus
ENSPLAG00000007055	hdlbpb	100	96.530	ENSSDUG00000020694	hdlbpb	100	96.530	Seriola_dumerili
ENSPLAG00000007055	hdlbpb	100	96.057	ENSSLDG00000020807	hdlbpb	100	96.057	Seriola_lalandi_dorsalis
ENSPLAG00000007055	hdlbpb	100	82.650	ENSSPUG00000018688	-	100	82.650	Sphenodon_punctatus
ENSPLAG00000007055	hdlbpb	100	96.609	ENSSPAG00000016969	hdlbpb	100	96.609	Stegastes_partitus
ENSPLAG00000007055	hdlbpb	98	92.082	ENSTRUG00000012888	hdlbpb	99	92.082	Takifugu_rubripes
ENSPLAG00000007055	hdlbpb	99	93.187	ENSTNIG00000002555	hdlbpb	100	93.187	Tetraodon_nigroviridis
ENSPLAG00000007055	hdlbpb	100	85.528	ENSXCOG00000001797	hdlbpb	100	85.528	Xiphophorus_couchianus
ENSPLAG00000007055	hdlbpb	100	98.580	ENSXMAG00000015633	hdlbpb	100	98.580	Xiphophorus_maculatus