EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000007115 (Gene tree)
Gene ID: 106940146
Gene Symbol: larp1b
Alias: -
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 48930 bases
Position: chrKQ548380.1:52538-101467
Accession: 106940146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000022523	La	PF05383.17	9.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000008248	-	4922	XM_015022787	ENSPLAP00000022523	1082 (aa)	XP_014878273	-

Gene Model

Click here to download ENSPLAG00000007115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000007115	larp1b	87	54.230	ENSPLAG00000008936	larp1	100	50.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000007115	larp1b	87	55.499	ENSG00000138709	LARP1B	97	57.035	Homo_sapiens
ENSPLAG00000007115	larp1b	100	80.145	ENSAPOG00000020101	larp1b	100	80.145	Acanthochromis_polyacanthus
ENSPLAG00000007115	larp1b	52	54.167	ENSAMEG00000002748	LARP1B	99	54.340	Ailuropoda_melanoleuca
ENSPLAG00000007115	larp1b	100	72.389	ENSACIG00000023890	larp1b	100	72.389	Amphilophus_citrinellus
ENSPLAG00000007115	larp1b	91	72.965	ENSAOCG00000014268	larp1b	99	73.038	Amphiprion_ocellaris
ENSPLAG00000007115	larp1b	100	80.639	ENSAPEG00000004126	larp1b	100	80.822	Amphiprion_percula
ENSPLAG00000007115	larp1b	100	79.743	ENSATEG00000017849	larp1b	100	79.635	Anabas_testudineus
ENSPLAG00000007115	larp1b	83	54.890	ENSAPLG00000010129	LARP1B	100	55.000	Anas_platyrhynchos
ENSPLAG00000007115	larp1b	84	56.825	ENSACAG00000011338	LARP1B	99	55.255	Anolis_carolinensis
ENSPLAG00000007115	larp1b	62	54.225	ENSANAG00000034618	LARP1B	83	54.225	Aotus_nancymaae
ENSPLAG00000007115	larp1b	100	79.745	ENSACLG00000011948	larp1b	100	79.927	Astatotilapia_calliptera
ENSPLAG00000007115	larp1b	84	60.988	ENSAMXG00000006805	larp1b	92	57.740	Astyanax_mexicanus
ENSPLAG00000007115	larp1b	87	57.732	ENSBTAG00000012135	LARP1B	95	52.710	Bos_taurus
ENSPLAG00000007115	larp1b	82	56.878	ENSCJAG00000003338	LARP1B	99	57.829	Callithrix_jacchus
ENSPLAG00000007115	larp1b	86	57.648	ENSCAFG00000003831	LARP1B	100	57.648	Canis_familiaris
ENSPLAG00000007115	larp1b	86	57.321	ENSCAFG00020018899	LARP1B	100	57.321	Canis_lupus_dingo
ENSPLAG00000007115	larp1b	85	56.799	ENSCHIG00000023144	LARP1B	99	56.354	Capra_hircus
ENSPLAG00000007115	larp1b	82	56.789	ENSCCAG00000021948	LARP1B	97	57.112	Cebus_capucinus
ENSPLAG00000007115	larp1b	82	56.121	ENSCATG00000013541	LARP1B	97	56.446	Cercocebus_atys
ENSPLAG00000007115	larp1b	82	57.127	ENSCSAG00000003582	LARP1B	97	57.576	Chlorocebus_sabaeus
ENSPLAG00000007115	larp1b	68	60.182	ENSCHOG00000005354	LARP1B	86	58.500	Choloepus_hoffmanni
ENSPLAG00000007115	larp1b	87	56.823	ENSCPBG00000017480	LARP1B	92	55.788	Chrysemys_picta_bellii
ENSPLAG00000007115	larp1b	82	55.258	ENSCANG00000026958	LARP1B	97	54.130	Colobus_angolensis_palliatus
ENSPLAG00000007115	larp1b	100	73.357	ENSCSEG00000013519	larp1b	100	74.167	Cynoglossus_semilaevis
ENSPLAG00000007115	larp1b	100	86.393	ENSCVAG00000005046	larp1b	100	85.936	Cyprinodon_variegatus
ENSPLAG00000007115	larp1b	99	58.866	ENSDARG00000061169	larp1b	96	59.946	Danio_rerio
ENSPLAG00000007115	larp1b	74	54.571	ENSETEG00000012497	LARP1B	88	54.571	Echinops_telfairi
ENSPLAG00000007115	larp1b	84	45.763	ENSEBUG00000003668	larp1b	93	45.391	Eptatretus_burgeri
ENSPLAG00000007115	larp1b	85	56.859	ENSEASG00005018106	LARP1B	99	57.357	Equus_asinus_asinus
ENSPLAG00000007115	larp1b	89	56.256	ENSECAG00000001088	LARP1B	88	55.718	Equus_caballus
ENSPLAG00000007115	larp1b	72	63.517	ENSELUG00000023774	larp1b	86	65.736	Esox_lucius
ENSPLAG00000007115	larp1b	84	54.725	ENSFALG00000008098	LARP1B	99	53.958	Ficedula_albicollis
ENSPLAG00000007115	larp1b	100	88.139	ENSFHEG00000010264	larp1b	97	87.682	Fundulus_heteroclitus
ENSPLAG00000007115	larp1b	89	64.758	ENSGMOG00000005207	larp1b	86	75.725	Gadus_morhua
ENSPLAG00000007115	larp1b	90	54.067	ENSGALG00000010207	LARP1B	95	53.458	Gallus_gallus
ENSPLAG00000007115	larp1b	85	93.057	ENSGAFG00000012012	larp1b	100	95.662	Gambusia_affinis
ENSPLAG00000007115	larp1b	100	67.725	ENSGACG00000004609	larp1b	100	68.777	Gasterosteus_aculeatus
ENSPLAG00000007115	larp1b	87	57.347	ENSGAGG00000017209	LARP1B	89	57.041	Gopherus_agassizii
ENSPLAG00000007115	larp1b	82	56.818	ENSGGOG00000015900	LARP1B	97	57.035	Gorilla_gorilla
ENSPLAG00000007115	larp1b	100	79.982	ENSHBUG00000009730	larp1b	100	80.165	Haplochromis_burtoni
ENSPLAG00000007115	larp1b	62	81.525	ENSHCOG00000000918	larp1b	96	81.471	Hippocampus_comes
ENSPLAG00000007115	larp1b	93	67.322	ENSIPUG00000012138	larp1b	98	57.371	Ictalurus_punctatus
ENSPLAG00000007115	larp1b	99	76.427	ENSKMAG00000011589	larp1b	99	75.322	Kryptolebias_marmoratus
ENSPLAG00000007115	larp1b	100	78.241	ENSLBEG00000005655	larp1b	100	78.332	Labrus_bergylta
ENSPLAG00000007115	larp1b	93	58.260	ENSLACG00000015247	LARP1B	91	58.658	Latimeria_chalumnae
ENSPLAG00000007115	larp1b	89	59.566	ENSLOCG00000010684	larp1b	99	59.961	Lepisosteus_oculatus
ENSPLAG00000007115	larp1b	82	57.313	ENSMFAG00000002218	LARP1B	97	57.530	Macaca_fascicularis
ENSPLAG00000007115	larp1b	82	57.313	ENSMMUG00000021347	LARP1B	97	57.530	Macaca_mulatta
ENSPLAG00000007115	larp1b	60	62.958	ENSMNEG00000030406	LARP1B	81	62.958	Macaca_nemestrina
ENSPLAG00000007115	larp1b	82	55.809	ENSMLEG00000009306	LARP1B	97	54.635	Mandrillus_leucophaeus
ENSPLAG00000007115	larp1b	98	80.672	ENSMAMG00000000081	larp1b	98	80.579	Mastacembelus_armatus
ENSPLAG00000007115	larp1b	72	81.772	ENSMZEG00005002545	larp1b	100	82.028	Maylandia_zebra
ENSPLAG00000007115	larp1b	81	51.094	ENSMGAG00000004809	LARP1B	100	51.094	Meleagris_gallopavo
ENSPLAG00000007115	larp1b	84	58.404	ENSMICG00000036111	LARP1B	100	58.811	Microcebus_murinus
ENSPLAG00000007115	larp1b	89	55.153	ENSMODG00000012300	LARP1B	90	54.744	Monodelphis_domestica
ENSPLAG00000007115	larp1b	100	79.269	ENSMALG00000003638	larp1b	100	83.040	Monopterus_albus
ENSPLAG00000007115	larp1b	86	57.840	ENSMPUG00000017365	LARP1B	88	56.594	Mustela_putorius_furo
ENSPLAG00000007115	larp1b	83	56.886	ENSMLUG00000010229	LARP1B	99	56.568	Myotis_lucifugus
ENSPLAG00000007115	larp1b	87	76.364	ENSNBRG00000023846	larp1b	100	76.426	Neolamprologus_brichardi
ENSPLAG00000007115	larp1b	82	56.541	ENSNLEG00000013819	LARP1B	97	56.757	Nomascus_leucogenys
ENSPLAG00000007115	larp1b	59	60.597	ENSMEUG00000010308	LARP1B	74	60.149	Notamacropus_eugenii
ENSPLAG00000007115	larp1b	76	51.445	ENSOPRG00000005478	LARP1B	92	51.792	Ochotona_princeps
ENSPLAG00000007115	larp1b	87	79.877	ENSONIG00000012386	larp1b	100	78.856	Oreochromis_niloticus
ENSPLAG00000007115	larp1b	84	55.567	ENSOCUG00000013330	LARP1B	99	55.979	Oryctolagus_cuniculus
ENSPLAG00000007115	larp1b	97	75.758	ENSORLG00000017954	larp1b	100	74.226	Oryzias_latipes
ENSPLAG00000007115	larp1b	99	75.208	ENSORLG00020013081	larp1b	100	74.613	Oryzias_latipes_hni
ENSPLAG00000007115	larp1b	98	75.349	ENSORLG00015009580	larp1b	100	74.317	Oryzias_latipes_hsok
ENSPLAG00000007115	larp1b	98	77.934	ENSOMEG00000004210	larp1b	100	76.691	Oryzias_melastigma
ENSPLAG00000007115	larp1b	82	58.746	ENSOGAG00000005771	LARP1B	100	58.306	Otolemur_garnettii
ENSPLAG00000007115	larp1b	84	56.677	ENSOARG00000015300	LARP1B	99	56.151	Ovis_aries
ENSPLAG00000007115	larp1b	82	56.926	ENSPPAG00000030439	LARP1B	97	57.143	Pan_paniscus
ENSPLAG00000007115	larp1b	82	57.096	ENSPTRG00000016437	LARP1B	97	57.313	Pan_troglodytes
ENSPLAG00000007115	larp1b	82	57.313	ENSPANG00000012488	LARP1B	97	57.530	Papio_anubis
ENSPLAG00000007115	larp1b	76	61.494	ENSPKIG00000014360	larp1b	97	51.947	Paramormyrops_kingsleyae
ENSPLAG00000007115	larp1b	86	57.246	ENSPSIG00000012885	LARP1B	99	57.380	Pelodiscus_sinensis
ENSPLAG00000007115	larp1b	67	76.954	ENSPMGG00000007207	larp1b	90	76.819	Periophthalmus_magnuspinnatus
ENSPLAG00000007115	larp1b	61	57.223	ENSPMAG00000002700	larp1b	99	50.150	Petromyzon_marinus
ENSPLAG00000007115	larp1b	87	57.449	ENSPCIG00000026516	LARP1B	99	62.533	Phascolarctos_cinereus
ENSPLAG00000007115	larp1b	100	96.934	ENSPFOG00000019519	larp1b	100	96.934	Poecilia_formosa
ENSPLAG00000007115	larp1b	63	99.124	ENSPFOG00000022837	-	99	99.124	Poecilia_formosa
ENSPLAG00000007115	larp1b	100	98.433	ENSPMEG00000001224	larp1b	100	98.433	Poecilia_mexicana
ENSPLAG00000007115	larp1b	84	54.795	ENSPCAG00000007546	LARP1B	99	55.005	Procavia_capensis
ENSPLAG00000007115	larp1b	82	46.868	ENSPCOG00000021874	LARP1B	97	68.293	Propithecus_coquereli
ENSPLAG00000007115	larp1b	84	54.011	ENSPVAG00000005373	LARP1B	100	54.118	Pteropus_vampyrus
ENSPLAG00000007115	larp1b	72	81.061	ENSPNYG00000017357	larp1b	100	81.061	Pundamilia_nyererei
ENSPLAG00000007115	larp1b	86	70.147	ENSPNAG00000008823	larp1b	97	58.005	Pygocentrus_nattereri
ENSPLAG00000007115	larp1b	82	57.421	ENSRROG00000030771	LARP1B	97	57.530	Rhinopithecus_roxellana
ENSPLAG00000007115	larp1b	61	53.333	ENSSHAG00000014474	LARP1B	99	53.352	Sarcophilus_harrisii
ENSPLAG00000007115	larp1b	85	80.757	ENSSMAG00000006347	larp1b	95	80.679	Scophthalmus_maximus
ENSPLAG00000007115	larp1b	95	82.932	ENSSDUG00000004182	larp1b	100	80.255	Seriola_dumerili
ENSPLAG00000007115	larp1b	89	79.258	ENSSLDG00000014613	larp1b	99	78.423	Seriola_lalandi_dorsalis
ENSPLAG00000007115	larp1b	81	56.821	ENSSPUG00000011837	LARP1B	98	55.118	Sphenodon_punctatus
ENSPLAG00000007115	larp1b	96	83.476	ENSSPAG00000017772	larp1b	100	81.703	Stegastes_partitus
ENSPLAG00000007115	larp1b	87	55.475	ENSSSCG00000034280	LARP1B	98	80.460	Sus_scrofa
ENSPLAG00000007115	larp1b	66	61.623	ENSTGUG00000002098	-	86	61.623	Taeniopygia_guttata
ENSPLAG00000007115	larp1b	99	74.490	ENSTRUG00000005612	larp1b	99	72.913	Takifugu_rubripes
ENSPLAG00000007115	larp1b	80	83.929	ENSTNIG00000012398	larp1b	94	82.934	Tetraodon_nigroviridis
ENSPLAG00000007115	larp1b	54	62.191	ENSTBEG00000004177	LARP1B	67	62.191	Tupaia_belangeri
ENSPLAG00000007115	larp1b	76	57.326	ENSTTRG00000012984	LARP1B	91	57.326	Tursiops_truncatus
ENSPLAG00000007115	larp1b	86	57.664	ENSUMAG00000007373	LARP1B	100	57.769	Ursus_maritimus
ENSPLAG00000007115	larp1b	82	49.617	ENSVPAG00000007223	LARP1B	91	73.494	Vicugna_pacos
ENSPLAG00000007115	larp1b	86	57.620	ENSVVUG00000011307	LARP1B	100	57.620	Vulpes_vulpes
ENSPLAG00000007115	larp1b	90	52.257	ENSXETG00000022512	larp1b	94	52.590	Xenopus_tropicalis
ENSPLAG00000007115	larp1b	75	97.600	ENSXCOG00000004435	larp1b	96	97.600	Xiphophorus_couchianus
ENSPLAG00000007115	larp1b	100	96.055	ENSXMAG00000008150	larp1b	100	96.055	Xiphophorus_maculatus