EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000007288 (Gene tree)
Gene ID: 106951817
Gene Symbol: crnkl1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 9021 bases
Position: chrKQ545790.1:100416-109436
Accession: 106951817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000005391	Suf	PF05843.14	9.3e-11	1	1
ENSPLAP00000005391	HAT	PF02184.16	3.9e-35	1	2
ENSPLAP00000005391	HAT	PF02184.16	3.9e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000008024	-	4688	XM_015039526	ENSPLAP00000005391	769 (aa)	XP_014895012	-

Gene Model

Click here to download ENSPLAG00000007288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000007288	crnkl1	90	84.325	ENSG00000101343	CRNKL1	97	86.186	Homo_sapiens
ENSPLAG00000007288	crnkl1	92	92.079	ENSAPOG00000009705	crnkl1	97	93.443	Acanthochromis_polyacanthus
ENSPLAG00000007288	crnkl1	89	84.942	ENSAMEG00000000270	CRNKL1	83	85.051	Ailuropoda_melanoleuca
ENSPLAG00000007288	crnkl1	94	87.933	ENSACIG00000015267	crnkl1	89	92.654	Amphilophus_citrinellus
ENSPLAG00000007288	crnkl1	92	92.079	ENSAOCG00000021964	crnkl1	89	94.784	Amphiprion_ocellaris
ENSPLAG00000007288	crnkl1	92	91.690	ENSAPEG00000015041	crnkl1	89	95.052	Amphiprion_percula
ENSPLAG00000007288	crnkl1	93	88.920	ENSATEG00000001068	crnkl1	88	92.825	Anabas_testudineus
ENSPLAG00000007288	crnkl1	86	85.303	ENSAPLG00000013105	CRNKL1	97	84.558	Anas_platyrhynchos
ENSPLAG00000007288	crnkl1	89	85.109	ENSACAG00000005284	CRNKL1	98	86.587	Anolis_carolinensis
ENSPLAG00000007288	crnkl1	82	86.190	ENSANAG00000024889	CRNKL1	99	86.190	Aotus_nancymaae
ENSPLAG00000007288	crnkl1	93	89.320	ENSACLG00000010813	crnkl1	89	94.162	Astatotilapia_calliptera
ENSPLAG00000007288	crnkl1	93	86.445	ENSAMXG00000018334	crnkl1	90	91.304	Astyanax_mexicanus
ENSPLAG00000007288	crnkl1	90	85.051	ENSBTAG00000008472	CRNKL1	96	87.087	Bos_taurus
ENSPLAG00000007288	crnkl1	83	63.453	WBGene00019762	M03F8.3	88	63.691	Caenorhabditis_elegans
ENSPLAG00000007288	crnkl1	90	84.249	ENSCJAG00000005393	CRNKL1	97	86.336	Callithrix_jacchus
ENSPLAG00000007288	crnkl1	89	84.942	ENSCAFG00000005333	CRNKL1	91	87.087	Canis_familiaris
ENSPLAG00000007288	crnkl1	90	85.051	ENSCAFG00020027488	CRNKL1	97	87.087	Canis_lupus_dingo
ENSPLAG00000007288	crnkl1	90	84.180	ENSCHIG00000013171	CRNKL1	96	86.186	Capra_hircus
ENSPLAG00000007288	crnkl1	90	83.815	ENSTSYG00000004197	CRNKL1	97	86.186	Carlito_syrichta
ENSPLAG00000007288	crnkl1	84	82.692	ENSCAPG00000010501	CRNKL1	96	84.975	Cavia_aperea
ENSPLAG00000007288	crnkl1	90	84.035	ENSCPOG00000004418	CRNKL1	97	86.036	Cavia_porcellus
ENSPLAG00000007288	crnkl1	90	84.104	ENSCCAG00000027037	CRNKL1	97	86.186	Cebus_capucinus
ENSPLAG00000007288	crnkl1	90	84.180	ENSCATG00000034247	CRNKL1	97	86.036	Cercocebus_atys
ENSPLAG00000007288	crnkl1	90	84.325	ENSCLAG00000013859	CRNKL1	97	86.336	Chinchilla_lanigera
ENSPLAG00000007288	crnkl1	90	84.180	ENSCSAG00000011434	CRNKL1	97	86.036	Chlorocebus_sabaeus
ENSPLAG00000007288	crnkl1	89	84.211	ENSCHOG00000006371	CRNKL1	81	86.336	Choloepus_hoffmanni
ENSPLAG00000007288	crnkl1	88	86.795	ENSCPBG00000023501	CRNKL1	98	86.885	Chrysemys_picta_bellii
ENSPLAG00000007288	crnkl1	86	68.571	ENSCING00000002709	-	97	68.571	Ciona_intestinalis
ENSPLAG00000007288	crnkl1	90	84.180	ENSCANG00000038789	CRNKL1	97	86.036	Colobus_angolensis_palliatus
ENSPLAG00000007288	crnkl1	90	84.226	ENSCGRG00001001115	-	97	86.336	Cricetulus_griseus_chok1gshd
ENSPLAG00000007288	crnkl1	90	84.226	ENSCGRG00001000687	-	97	86.336	Cricetulus_griseus_chok1gshd
ENSPLAG00000007288	crnkl1	90	84.226	ENSCGRG00000007854	Crnkl1	97	86.336	Cricetulus_griseus_crigri
ENSPLAG00000007288	crnkl1	93	88.350	ENSCSEG00000005594	crnkl1	85	93.145	Cynoglossus_semilaevis
ENSPLAG00000007288	crnkl1	87	96.707	ENSCVAG00000015172	crnkl1	99	91.328	Cyprinodon_variegatus
ENSPLAG00000007288	crnkl1	90	86.134	ENSDARG00000007901	crnkl1	89	90.313	Danio_rerio
ENSPLAG00000007288	crnkl1	89	84.593	ENSDNOG00000016226	CRNKL1	92	86.787	Dasypus_novemcinctus
ENSPLAG00000007288	crnkl1	87	78.539	ENSDORG00000030174	-	99	78.539	Dipodomys_ordii
ENSPLAG00000007288	crnkl1	87	79.223	ENSDORG00000023724	-	99	79.223	Dipodomys_ordii
ENSPLAG00000007288	crnkl1	90	83.022	ENSDORG00000000394	-	97	84.970	Dipodomys_ordii
ENSPLAG00000007288	crnkl1	86	69.520	FBgn0000377	crn	95	69.520	Drosophila_melanogaster
ENSPLAG00000007288	crnkl1	89	74.161	ENSETEG00000003711	CRNKL1	82	75.298	Echinops_telfairi
ENSPLAG00000007288	crnkl1	87	62.705	ENSEBUG00000013461	crnkl1	94	57.228	Eptatretus_burgeri
ENSPLAG00000007288	crnkl1	88	86.074	ENSEASG00005002072	CRNKL1	97	87.087	Equus_asinus_asinus
ENSPLAG00000007288	crnkl1	88	86.074	ENSECAG00000022215	CRNKL1	97	87.087	Equus_caballus
ENSPLAG00000007288	crnkl1	89	82.018	ENSEEUG00000000413	CRNKL1	91	82.794	Erinaceus_europaeus
ENSPLAG00000007288	crnkl1	87	89.205	ENSELUG00000015424	crnkl1	95	88.823	Esox_lucius
ENSPLAG00000007288	crnkl1	90	85.051	ENSFCAG00000000714	CRNKL1	97	87.087	Felis_catus
ENSPLAG00000007288	crnkl1	85	86.371	ENSFALG00000004611	CRNKL1	97	86.371	Ficedula_albicollis
ENSPLAG00000007288	crnkl1	90	84.615	ENSFDAG00000000604	CRNKL1	97	86.637	Fukomys_damarensis
ENSPLAG00000007288	crnkl1	96	87.664	ENSFHEG00000013163	crnkl1	93	92.758	Fundulus_heteroclitus
ENSPLAG00000007288	crnkl1	87	90.269	ENSGMOG00000007609	crnkl1	93	90.030	Gadus_morhua
ENSPLAG00000007288	crnkl1	87	86.957	ENSGALG00000008429	CRNKL1	97	86.957	Gallus_gallus
ENSPLAG00000007288	crnkl1	98	97.477	ENSGAFG00000014249	crnkl1	99	97.477	Gambusia_affinis
ENSPLAG00000007288	crnkl1	92	87.500	ENSGACG00000011852	crnkl1	90	91.518	Gasterosteus_aculeatus
ENSPLAG00000007288	crnkl1	84	85.248	ENSGAGG00000021233	CRNKL1	98	85.335	Gopherus_agassizii
ENSPLAG00000007288	crnkl1	90	84.325	ENSGGOG00000014176	CRNKL1	97	86.186	Gorilla_gorilla
ENSPLAG00000007288	crnkl1	94	89.286	ENSHBUG00000005246	crnkl1	88	94.311	Haplochromis_burtoni
ENSPLAG00000007288	crnkl1	89	84.840	ENSHGLG00000010856	CRNKL1	97	86.637	Heterocephalus_glaber_female
ENSPLAG00000007288	crnkl1	89	84.840	ENSHGLG00100011521	CRNKL1	97	86.637	Heterocephalus_glaber_male
ENSPLAG00000007288	crnkl1	87	89.805	ENSHCOG00000006420	crnkl1	97	89.450	Hippocampus_comes
ENSPLAG00000007288	crnkl1	84	89.060	ENSIPUG00000006751	crnkl1	90	89.094	Ictalurus_punctatus
ENSPLAG00000007288	crnkl1	83	69.969	ENSIPUG00000000315	-	99	71.181	Ictalurus_punctatus
ENSPLAG00000007288	crnkl1	88	75.811	ENSIPUG00000006836	-	98	76.233	Ictalurus_punctatus
ENSPLAG00000007288	crnkl1	90	84.761	ENSSTOG00000014747	CRNKL1	97	86.787	Ictidomys_tridecemlineatus
ENSPLAG00000007288	crnkl1	90	82.553	ENSJJAG00000016926	Crnkl1	97	84.457	Jaculus_jaculus
ENSPLAG00000007288	crnkl1	93	90.529	ENSKMAG00000003620	crnkl1	98	94.478	Kryptolebias_marmoratus
ENSPLAG00000007288	crnkl1	90	73.963	ENSLBEG00000003543	crnkl1	89	75.074	Labrus_bergylta
ENSPLAG00000007288	crnkl1	89	86.931	ENSLACG00000001129	CRNKL1	98	87.463	Latimeria_chalumnae
ENSPLAG00000007288	crnkl1	86	90.376	ENSLOCG00000016889	crnkl1	93	89.866	Lepisosteus_oculatus
ENSPLAG00000007288	crnkl1	90	84.058	ENSLAFG00000004512	CRNKL1	97	86.807	Loxodonta_africana
ENSPLAG00000007288	crnkl1	90	84.180	ENSMFAG00000039893	CRNKL1	97	86.036	Macaca_fascicularis
ENSPLAG00000007288	crnkl1	90	84.180	ENSMMUG00000007709	CRNKL1	97	86.036	Macaca_mulatta
ENSPLAG00000007288	crnkl1	90	84.180	ENSMNEG00000037490	CRNKL1	97	86.036	Macaca_nemestrina
ENSPLAG00000007288	crnkl1	90	84.180	ENSMLEG00000034885	CRNKL1	97	86.036	Mandrillus_leucophaeus
ENSPLAG00000007288	crnkl1	91	91.155	ENSMAMG00000008757	crnkl1	89	93.741	Mastacembelus_armatus
ENSPLAG00000007288	crnkl1	93	89.256	ENSMZEG00005022345	crnkl1	89	94.162	Maylandia_zebra
ENSPLAG00000007288	crnkl1	90	83.452	ENSMGAG00000003452	CRNKL1	95	84.150	Meleagris_gallopavo
ENSPLAG00000007288	crnkl1	90	84.226	ENSMAUG00000020764	Crnkl1	97	86.336	Mesocricetus_auratus
ENSPLAG00000007288	crnkl1	90	84.180	ENSMICG00000006048	CRNKL1	97	86.186	Microcebus_murinus
ENSPLAG00000007288	crnkl1	86	61.898	ENSMOCG00000004179	-	95	61.976	Microtus_ochrogaster
ENSPLAG00000007288	crnkl1	90	76.529	ENSMOCG00000000681	-	96	78.319	Microtus_ochrogaster
ENSPLAG00000007288	crnkl1	82	90.823	ENSMMOG00000017601	crnkl1	97	90.823	Mola_mola
ENSPLAG00000007288	crnkl1	88	82.994	ENSMODG00000005961	-	97	83.455	Monodelphis_domestica
ENSPLAG00000007288	crnkl1	88	79.852	ENSMODG00000010857	-	97	80.299	Monodelphis_domestica
ENSPLAG00000007288	crnkl1	95	61.486	ENSMALG00000011211	crnkl1	98	68.097	Monopterus_albus
ENSPLAG00000007288	crnkl1	90	84.515	MGP_CAROLIEiJ_G0024394	Crnkl1	97	86.637	Mus_caroli
ENSPLAG00000007288	crnkl1	90	84.515	ENSMUSG00000001767	Crnkl1	97	86.637	Mus_musculus
ENSPLAG00000007288	crnkl1	90	83.647	MGP_PahariEiJ_G0025838	Crnkl1	97	85.736	Mus_pahari
ENSPLAG00000007288	crnkl1	90	84.515	MGP_SPRETEiJ_G0025312	Crnkl1	97	86.637	Mus_spretus
ENSPLAG00000007288	crnkl1	90	85.051	ENSMPUG00000001226	CRNKL1	97	87.087	Mustela_putorius_furo
ENSPLAG00000007288	crnkl1	89	84.526	ENSMLUG00000016513	CRNKL1	86	86.657	Myotis_lucifugus
ENSPLAG00000007288	crnkl1	90	82.336	ENSNGAG00000023097	Crnkl1	97	84.242	Nannospalax_galili
ENSPLAG00000007288	crnkl1	93	89.459	ENSNBRG00000007867	crnkl1	88	94.311	Neolamprologus_brichardi
ENSPLAG00000007288	crnkl1	90	81.422	ENSNLEG00000009862	CRNKL1	97	83.183	Nomascus_leucogenys
ENSPLAG00000007288	crnkl1	86	85.909	ENSMEUG00000012167	-	98	86.412	Notamacropus_eugenii
ENSPLAG00000007288	crnkl1	89	80.381	ENSMEUG00000002361	-	98	81.009	Notamacropus_eugenii
ENSPLAG00000007288	crnkl1	76	59.109	ENSOPRG00000009242	-	61	59.109	Ochotona_princeps
ENSPLAG00000007288	crnkl1	90	84.180	ENSODEG00000012175	CRNKL1	97	86.186	Octodon_degus
ENSPLAG00000007288	crnkl1	94	89.306	ENSONIG00000018728	crnkl1	88	94.311	Oreochromis_niloticus
ENSPLAG00000007288	crnkl1	89	83.918	ENSOCUG00000015484	CRNKL1	82	85.588	Oryctolagus_cuniculus
ENSPLAG00000007288	crnkl1	93	87.692	ENSORLG00000017240	crnkl1	96	87.692	Oryzias_latipes
ENSPLAG00000007288	crnkl1	96	86.351	ENSORLG00020001742	crnkl1	99	85.849	Oryzias_latipes_hni
ENSPLAG00000007288	crnkl1	93	88.006	ENSORLG00015019564	crnkl1	90	91.654	Oryzias_latipes_hsok
ENSPLAG00000007288	crnkl1	93	88.128	ENSOMEG00000019895	crnkl1	90	92.250	Oryzias_melastigma
ENSPLAG00000007288	crnkl1	90	84.325	ENSOGAG00000011544	CRNKL1	97	86.336	Otolemur_garnettii
ENSPLAG00000007288	crnkl1	89	85.088	ENSOARG00000002150	CRNKL1	89	84.862	Ovis_aries
ENSPLAG00000007288	crnkl1	89	83.187	ENSPPAG00000027847	CRNKL1	81	85.135	Pan_paniscus
ENSPLAG00000007288	crnkl1	90	85.051	ENSPPRG00000001955	CRNKL1	97	87.087	Panthera_pardus
ENSPLAG00000007288	crnkl1	90	85.051	ENSPTIG00000007393	CRNKL1	97	87.087	Panthera_tigris_altaica
ENSPLAG00000007288	crnkl1	90	84.325	ENSPTRG00000030609	CRNKL1	97	86.186	Pan_troglodytes
ENSPLAG00000007288	crnkl1	90	84.180	ENSPANG00000017420	CRNKL1	97	86.036	Papio_anubis
ENSPLAG00000007288	crnkl1	86	85.886	ENSPKIG00000017093	crnkl1	88	85.312	Paramormyrops_kingsleyae
ENSPLAG00000007288	crnkl1	87	85.097	ENSPSIG00000012705	CRNKL1	97	85.180	Pelodiscus_sinensis
ENSPLAG00000007288	crnkl1	89	84.716	ENSPMGG00000006263	crnkl1	95	85.246	Periophthalmus_magnuspinnatus
ENSPLAG00000007288	crnkl1	90	84.515	ENSPEMG00000000073	-	96	86.637	Peromyscus_maniculatus_bairdii
ENSPLAG00000007288	crnkl1	88	82.988	ENSPMAG00000002250	crnkl1	97	83.061	Petromyzon_marinus
ENSPLAG00000007288	crnkl1	89	83.215	ENSPCIG00000025825	CRNKL1	97	83.668	Phascolarctos_cinereus
ENSPLAG00000007288	crnkl1	96	99.592	ENSPFOG00000005102	crnkl1	99	99.592	Poecilia_formosa
ENSPLAG00000007288	crnkl1	96	99.457	ENSPMEG00000008865	crnkl1	100	99.457	Poecilia_mexicana
ENSPLAG00000007288	crnkl1	96	97.568	ENSPREG00000012615	crnkl1	99	97.568	Poecilia_reticulata
ENSPLAG00000007288	crnkl1	89	84.064	ENSPPYG00000010747	CRNKL1	79	86.036	Pongo_abelii
ENSPLAG00000007288	crnkl1	88	79.706	ENSPCAG00000003296	CRNKL1	84	80.861	Procavia_capensis
ENSPLAG00000007288	crnkl1	89	83.041	ENSPCOG00000017608	CRNKL1	82	84.071	Propithecus_coquereli
ENSPLAG00000007288	crnkl1	88	84.853	ENSPVAG00000006207	CRNKL1	81	86.937	Pteropus_vampyrus
ENSPLAG00000007288	crnkl1	93	89.182	ENSPNYG00000001977	crnkl1	88	94.012	Pundamilia_nyererei
ENSPLAG00000007288	crnkl1	92	88.102	ENSPNAG00000001507	crnkl1	96	86.499	Pygocentrus_nattereri
ENSPLAG00000007288	crnkl1	90	84.515	ENSRNOG00000010587	Crnkl1	97	86.637	Rattus_norvegicus
ENSPLAG00000007288	crnkl1	90	84.370	ENSRNOG00000040045	Crnkl1	97	86.486	Rattus_norvegicus
ENSPLAG00000007288	crnkl1	90	84.180	ENSRBIG00000031770	CRNKL1	97	86.036	Rhinopithecus_bieti
ENSPLAG00000007288	crnkl1	90	84.035	ENSRROG00000040450	CRNKL1	97	85.886	Rhinopithecus_roxellana
ENSPLAG00000007288	crnkl1	84	36.522	YLR117C	CLF1	99	36.614	Saccharomyces_cerevisiae
ENSPLAG00000007288	crnkl1	90	84.104	ENSSBOG00000029672	CRNKL1	97	86.336	Saimiri_boliviensis_boliviensis
ENSPLAG00000007288	crnkl1	86	69.091	ENSSHAG00000011199	CRNKL1	99	69.091	Sarcophilus_harrisii
ENSPLAG00000007288	crnkl1	86	89.894	ENSSFOG00015000946	crnkl1	87	89.805	Scleropages_formosus
ENSPLAG00000007288	crnkl1	94	87.636	ENSSMAG00000007933	crnkl1	87	93.155	Scophthalmus_maximus
ENSPLAG00000007288	crnkl1	92	83.333	ENSSDUG00000012625	crnkl1	92	82.312	Seriola_dumerili
ENSPLAG00000007288	crnkl1	94	89.641	ENSSLDG00000021413	crnkl1	87	94.179	Seriola_lalandi_dorsalis
ENSPLAG00000007288	crnkl1	91	82.486	ENSSARG00000006443	CRNKL1	82	84.380	Sorex_araneus
ENSPLAG00000007288	crnkl1	89	85.234	ENSSPUG00000005254	CRNKL1	97	87.106	Sphenodon_punctatus
ENSPLAG00000007288	crnkl1	92	91.396	ENSSPAG00000016150	crnkl1	86	94.903	Stegastes_partitus
ENSPLAG00000007288	crnkl1	89	84.884	ENSSSCG00000038587	CRNKL1	96	87.087	Sus_scrofa
ENSPLAG00000007288	crnkl1	87	86.677	ENSTGUG00000007645	CRNKL1	96	86.567	Taeniopygia_guttata
ENSPLAG00000007288	crnkl1	87	85.097	ENSTRUG00000015417	crnkl1	89	85.246	Takifugu_rubripes
ENSPLAG00000007288	crnkl1	87	89.671	ENSTNIG00000010710	crnkl1	97	89.671	Tetraodon_nigroviridis
ENSPLAG00000007288	crnkl1	81	84.480	ENSTBEG00000001304	CRNKL1	82	84.603	Tupaia_belangeri
ENSPLAG00000007288	crnkl1	81	82.240	ENSTTRG00000000484	CRNKL1	83	80.615	Tursiops_truncatus
ENSPLAG00000007288	crnkl1	90	85.051	ENSUAMG00000018586	CRNKL1	97	87.087	Ursus_americanus
ENSPLAG00000007288	crnkl1	90	85.051	ENSUMAG00000024957	CRNKL1	97	87.087	Ursus_maritimus
ENSPLAG00000007288	crnkl1	89	84.942	ENSVVUG00000012559	CRNKL1	80	87.087	Vulpes_vulpes
ENSPLAG00000007288	crnkl1	89	85.673	ENSXETG00000009698	crnkl1	98	86.330	Xenopus_tropicalis
ENSPLAG00000007288	crnkl1	96	96.635	ENSXCOG00000000824	crnkl1	99	96.635	Xiphophorus_couchianus
ENSPLAG00000007288	crnkl1	96	97.439	ENSXMAG00000006896	crnkl1	99	97.439	Xiphophorus_maculatus