EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000007323 (Gene tree)
Gene ID: 106957102
Gene Symbol: srpra
Alias: -
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11722 bases
Position: chrKQ546189.1:410632-422353
Accession: 106957102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000022600	SRP54	PF00448.22	5.8e-48	1	1
ENSPLAP00000005390	SRP54	PF00448.22	7.5e-48	1	1
ENSPLAP00000022600	SRP54_N	PF02881.19	2.2e-09	1	1
ENSPLAP00000005390	SRP54_N	PF02881.19	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000008029	-	4480	XM_015048325	ENSPLAP00000005390	650 (aa)	XP_014903811	UPI00072E8F40
ENSPLAT00000008048	-	1758	-	ENSPLAP00000022600	585 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000007323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000007323	srpra	100	69.033	ENSG00000182934	SRPRA	100	67.474	Homo_sapiens
ENSPLAG00000007323	srpra	100	90.462	ENSAPOG00000017588	srpra	100	90.462	Acanthochromis_polyacanthus
ENSPLAG00000007323	srpra	100	69.453	ENSAMEG00000000117	SRPRA	100	66.918	Ailuropoda_melanoleuca
ENSPLAG00000007323	srpra	100	85.077	ENSACIG00000021588	srpra	100	86.308	Amphilophus_citrinellus
ENSPLAG00000007323	srpra	100	90.462	ENSAOCG00000018884	srpra	100	90.462	Amphiprion_ocellaris
ENSPLAG00000007323	srpra	100	90.615	ENSAPEG00000022286	srpra	100	87.584	Amphiprion_percula
ENSPLAG00000007323	srpra	100	87.270	ENSATEG00000023578	srpra	95	94.848	Anabas_testudineus
ENSPLAG00000007323	srpra	94	71.707	ENSAPLG00000016079	SRPRA	99	69.870	Anas_platyrhynchos
ENSPLAG00000007323	srpra	100	71.579	ENSACAG00000000108	SRPRA	100	70.075	Anolis_carolinensis
ENSPLAG00000007323	srpra	100	68.825	ENSANAG00000020346	SRPRA	100	67.119	Aotus_nancymaae
ENSPLAG00000007323	srpra	100	87.231	ENSACLG00000000518	srpra	100	87.077	Astatotilapia_calliptera
ENSPLAG00000007323	srpra	100	74.388	ENSAMXG00000009975	srpra	96	93.333	Astyanax_mexicanus
ENSPLAG00000007323	srpra	100	68.589	ENSBTAG00000014105	SRPRA	100	67.678	Bos_taurus
ENSPLAG00000007323	srpra	99	49.470	WBGene00009521	F38A1.8	99	48.411	Caenorhabditis_elegans
ENSPLAG00000007323	srpra	100	68.778	ENSCJAG00000008752	SRPRA	100	67.069	Callithrix_jacchus
ENSPLAG00000007323	srpra	100	67.428	ENSCAFG00000010474	SRPRA	100	65.554	Canis_familiaris
ENSPLAG00000007323	srpra	100	69.102	ENSCAFG00020010608	SRPRA	100	67.223	Canis_lupus_dingo
ENSPLAG00000007323	srpra	100	69.149	ENSCHIG00000012423	SRPRA	100	67.375	Capra_hircus
ENSPLAG00000007323	srpra	100	71.282	ENSTSYG00000005187	SRPRA	90	87.619	Carlito_syrichta
ENSPLAG00000007323	srpra	94	70.345	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSPLAG00000007323	srpra	100	69.231	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSPLAG00000007323	srpra	100	69.091	ENSCCAG00000025602	SRPRA	100	67.527	Cebus_capucinus
ENSPLAG00000007323	srpra	100	68.976	ENSCATG00000039354	SRPRA	100	67.270	Cercocebus_atys
ENSPLAG00000007323	srpra	100	69.697	ENSCLAG00000016839	SRPRA	100	67.982	Chinchilla_lanigera
ENSPLAG00000007323	srpra	100	68.825	ENSCSAG00000002271	SRPRA	100	67.119	Chlorocebus_sabaeus
ENSPLAG00000007323	srpra	52	87.245	ENSCHOG00000010015	-	71	87.245	Choloepus_hoffmanni
ENSPLAG00000007323	srpra	100	71.493	ENSCPBG00000011128	SRPRA	100	70.197	Chrysemys_picta_bellii
ENSPLAG00000007323	srpra	99	59.327	ENSCING00000008954	-	100	58.869	Ciona_intestinalis
ENSPLAG00000007323	srpra	99	60.032	ENSCSAVG00000005602	-	100	59.325	Ciona_savignyi
ENSPLAG00000007323	srpra	100	68.825	ENSCANG00000032337	SRPRA	100	67.119	Colobus_angolensis_palliatus
ENSPLAG00000007323	srpra	100	69.894	ENSCGRG00001017670	Srpr	100	68.030	Cricetulus_griseus_chok1gshd
ENSPLAG00000007323	srpra	100	69.894	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSPLAG00000007323	srpra	100	85.145	ENSCSEG00000002374	srpra	100	84.686	Cynoglossus_semilaevis
ENSPLAG00000007323	srpra	100	90.199	ENSCVAG00000019881	srpra	100	90.352	Cyprinodon_variegatus
ENSPLAG00000007323	srpra	100	78.473	ENSDARG00000061124	srpra	100	77.252	Danio_rerio
ENSPLAG00000007323	srpra	100	68.759	ENSDNOG00000010821	SRPRA	100	66.517	Dasypus_novemcinctus
ENSPLAG00000007323	srpra	100	68.741	ENSDORG00000016719	Srpr	100	67.678	Dipodomys_ordii
ENSPLAG00000007323	srpra	99	52.083	FBgn0010391	Gtp-bp	100	52.083	Drosophila_melanogaster
ENSPLAG00000007323	srpra	100	68.778	ENSETEG00000013956	SRPRA	100	66.767	Echinops_telfairi
ENSPLAG00000007323	srpra	55	83.333	ENSEBUG00000002602	srpra	73	83.810	Eptatretus_burgeri
ENSPLAG00000007323	srpra	100	68.541	ENSEASG00005022980	SRPRA	100	66.667	Equus_asinus_asinus
ENSPLAG00000007323	srpra	100	68.541	ENSECAG00000014692	SRPRA	100	66.667	Equus_caballus
ENSPLAG00000007323	srpra	100	63.594	ENSEEUG00000007920	SRPRA	100	62.861	Erinaceus_europaeus
ENSPLAG00000007323	srpra	100	85.123	ENSELUG00000017643	srpra	100	84.509	Esox_lucius
ENSPLAG00000007323	srpra	100	69.789	ENSFCAG00000011274	-	100	67.121	Felis_catus
ENSPLAG00000007323	srpra	80	64.419	ENSFCAG00000030894	-	99	60.902	Felis_catus
ENSPLAG00000007323	srpra	99	68.453	ENSFALG00000005048	SRPRA	99	67.331	Ficedula_albicollis
ENSPLAG00000007323	srpra	100	68.541	ENSFDAG00000016229	SRPRA	92	83.916	Fukomys_damarensis
ENSPLAG00000007323	srpra	100	93.241	ENSFHEG00000016959	srpra	100	93.395	Fundulus_heteroclitus
ENSPLAG00000007323	srpra	100	81.288	ENSGMOG00000013244	srpra	100	81.135	Gadus_morhua
ENSPLAG00000007323	srpra	100	71.951	ENSGALG00000030759	SRPRA	100	70.382	Gallus_gallus
ENSPLAG00000007323	srpra	100	96.308	ENSGAFG00000000453	srpra	100	96.308	Gambusia_affinis
ENSPLAG00000007323	srpra	100	82.848	ENSGACG00000006550	srpra	100	82.615	Gasterosteus_aculeatus
ENSPLAG00000007323	srpra	100	71.644	ENSGAGG00000021157	SRPRA	100	70.348	Gopherus_agassizii
ENSPLAG00000007323	srpra	100	69.033	ENSGGOG00000012962	SRPRA	100	67.474	Gorilla_gorilla
ENSPLAG00000007323	srpra	100	87.077	ENSHBUG00000000119	srpra	100	86.923	Haplochromis_burtoni
ENSPLAG00000007323	srpra	100	69.044	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSPLAG00000007323	srpra	100	69.044	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSPLAG00000007323	srpra	100	85.378	ENSHCOG00000010749	srpra	100	85.605	Hippocampus_comes
ENSPLAG00000007323	srpra	94	75.203	ENSIPUG00000000867	srpra	99	75.527	Ictalurus_punctatus
ENSPLAG00000007323	srpra	100	69.242	ENSSTOG00000009897	SRPRA	100	67.375	Ictidomys_tridecemlineatus
ENSPLAG00000007323	srpra	100	69.044	ENSJJAG00000020272	Srpr	100	67.982	Jaculus_jaculus
ENSPLAG00000007323	srpra	100	89.110	ENSKMAG00000002280	srpra	100	89.877	Kryptolebias_marmoratus
ENSPLAG00000007323	srpra	100	87.558	ENSLBEG00000009608	srpra	100	87.404	Labrus_bergylta
ENSPLAG00000007323	srpra	93	77.451	ENSLACG00000017781	SRPRA	100	69.716	Latimeria_chalumnae
ENSPLAG00000007323	srpra	100	76.435	ENSLOCG00000002733	srpra	100	75.340	Lepisosteus_oculatus
ENSPLAG00000007323	srpra	100	68.589	ENSLAFG00000010252	SRPRA	100	66.717	Loxodonta_africana
ENSPLAG00000007323	srpra	100	68.976	ENSMFAG00000032606	SRPRA	100	67.270	Macaca_fascicularis
ENSPLAG00000007323	srpra	100	68.976	ENSMMUG00000007938	SRPRA	100	67.270	Macaca_mulatta
ENSPLAG00000007323	srpra	100	69.394	ENSMNEG00000030709	SRPRA	100	67.678	Macaca_nemestrina
ENSPLAG00000007323	srpra	100	68.976	ENSMLEG00000043404	SRPRA	100	67.270	Mandrillus_leucophaeus
ENSPLAG00000007323	srpra	100	85.538	ENSMAMG00000000473	srpra	100	86.154	Mastacembelus_armatus
ENSPLAG00000007323	srpra	100	87.231	ENSMZEG00005013432	srpra	100	87.077	Maylandia_zebra
ENSPLAG00000007323	srpra	94	71.498	ENSMGAG00000000732	SRPRA	100	69.805	Meleagris_gallopavo
ENSPLAG00000007323	srpra	100	69.894	ENSMAUG00000015648	Srpr	100	68.030	Mesocricetus_auratus
ENSPLAG00000007323	srpra	100	68.976	ENSMICG00000015981	SRPRA	100	67.270	Microcebus_murinus
ENSPLAG00000007323	srpra	100	69.289	ENSMOCG00000008311	Srpr	100	67.576	Microtus_ochrogaster
ENSPLAG00000007323	srpra	100	81.553	ENSMMOG00000005019	srpra	100	81.392	Mola_mola
ENSPLAG00000007323	srpra	100	69.499	ENSMODG00000004576	-	100	67.629	Monodelphis_domestica
ENSPLAG00000007323	srpra	100	88.462	ENSMALG00000011343	srpra	100	88.462	Monopterus_albus
ENSPLAG00000007323	srpra	100	68.939	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSPLAG00000007323	srpra	100	69.985	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSPLAG00000007323	srpra	100	69.289	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSPLAG00000007323	srpra	100	66.040	MGP_SPRETEiJ_G0033075	Srpr	88	82.759	Mus_spretus
ENSPLAG00000007323	srpra	100	68.835	ENSMPUG00000006626	SRPRA	100	67.375	Mustela_putorius_furo
ENSPLAG00000007323	srpra	100	69.149	ENSMLUG00000017334	SRPRA	100	67.073	Myotis_lucifugus
ENSPLAG00000007323	srpra	100	68.892	ENSNGAG00000015686	Srpr	100	67.223	Nannospalax_galili
ENSPLAG00000007323	srpra	100	86.615	ENSNBRG00000017311	srpra	100	86.462	Neolamprologus_brichardi
ENSPLAG00000007323	srpra	99	65.805	ENSNLEG00000007467	SRPRA	100	66.984	Nomascus_leucogenys
ENSPLAG00000007323	srpra	94	67.840	ENSMEUG00000004956	SRPRA	100	66.186	Notamacropus_eugenii
ENSPLAG00000007323	srpra	100	64.962	ENSOPRG00000013160	SRPRA	100	63.651	Ochotona_princeps
ENSPLAG00000007323	srpra	100	69.697	ENSODEG00000004730	SRPRA	100	67.982	Octodon_degus
ENSPLAG00000007323	srpra	100	86.769	ENSONIG00000005324	srpra	100	86.615	Oreochromis_niloticus
ENSPLAG00000007323	srpra	100	69.231	ENSOCUG00000017057	SRPRA	100	67.372	Oryctolagus_cuniculus
ENSPLAG00000007323	srpra	100	85.692	ENSORLG00000014676	srpra	100	85.077	Oryzias_latipes
ENSPLAG00000007323	srpra	100	85.692	ENSORLG00020009240	srpra	100	85.077	Oryzias_latipes_hni
ENSPLAG00000007323	srpra	100	85.538	ENSORLG00015015405	srpra	100	84.923	Oryzias_latipes_hsok
ENSPLAG00000007323	srpra	100	85.846	ENSOMEG00000005872	srpra	100	85.231	Oryzias_melastigma
ENSPLAG00000007323	srpra	100	69.115	ENSOGAG00000008926	SRPRA	100	67.580	Otolemur_garnettii
ENSPLAG00000007323	srpra	100	66.161	ENSOARG00000012397	SRPRA	100	65.099	Ovis_aries
ENSPLAG00000007323	srpra	100	69.033	ENSPPAG00000030813	SRPRA	100	67.474	Pan_paniscus
ENSPLAG00000007323	srpra	100	69.789	ENSPPRG00000001542	SRPRA	100	67.121	Panthera_pardus
ENSPLAG00000007323	srpra	100	69.637	ENSPTIG00000006989	SRPRA	100	66.818	Panthera_tigris_altaica
ENSPLAG00000007323	srpra	100	69.033	ENSPTRG00000028360	SRPRA	100	67.474	Pan_troglodytes
ENSPLAG00000007323	srpra	100	68.976	ENSPANG00000010858	SRPRA	100	67.270	Papio_anubis
ENSPLAG00000007323	srpra	100	75.610	ENSPKIG00000016106	srpra	100	76.758	Paramormyrops_kingsleyae
ENSPLAG00000007323	srpra	94	71.452	ENSPSIG00000012009	SRPRA	100	70.113	Pelodiscus_sinensis
ENSPLAG00000007323	srpra	100	84.227	ENSPMGG00000001393	srpra	100	82.416	Periophthalmus_magnuspinnatus
ENSPLAG00000007323	srpra	100	69.592	ENSPEMG00000018279	Srpr	100	67.879	Peromyscus_maniculatus_bairdii
ENSPLAG00000007323	srpra	99	63.344	ENSPMAG00000009559	srpra	99	62.423	Petromyzon_marinus
ENSPLAG00000007323	srpra	100	68.333	ENSPCIG00000010207	SRPRA	100	67.424	Phascolarctos_cinereus
ENSPLAG00000007323	srpra	100	99.692	ENSPFOG00000003114	srpra	100	99.692	Poecilia_formosa
ENSPLAG00000007323	srpra	100	99.538	ENSPMEG00000015658	srpra	100	99.538	Poecilia_mexicana
ENSPLAG00000007323	srpra	100	97.846	ENSPREG00000004937	srpra	100	97.846	Poecilia_reticulata
ENSPLAG00000007323	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSPLAG00000007323	srpra	63	90.698	ENSPCAG00000003801	-	64	90.698	Procavia_capensis
ENSPLAG00000007323	srpra	100	68.675	ENSPCOG00000025726	SRPRA	100	66.667	Propithecus_coquereli
ENSPLAG00000007323	srpra	100	68.997	ENSPVAG00000000993	SRPRA	100	67.428	Pteropus_vampyrus
ENSPLAG00000007323	srpra	100	87.231	ENSPNYG00000012371	srpra	100	87.077	Pundamilia_nyererei
ENSPLAG00000007323	srpra	95	93.038	ENSPNAG00000013476	srpra	100	78.988	Pygocentrus_nattereri
ENSPLAG00000007323	srpra	100	69.289	ENSRNOG00000010543	Srpra	100	67.879	Rattus_norvegicus
ENSPLAG00000007323	srpra	100	68.825	ENSRBIG00000008702	SRPRA	100	67.270	Rhinopithecus_bieti
ENSPLAG00000007323	srpra	100	69.023	ENSRROG00000029494	SRPRA	100	67.319	Rhinopithecus_roxellana
ENSPLAG00000007323	srpra	56	41.983	YDR292C	-	52	41.945	Saccharomyces_cerevisiae
ENSPLAG00000007323	srpra	100	68.675	ENSSBOG00000035892	SRPRA	100	66.968	Saimiri_boliviensis_boliviensis
ENSPLAG00000007323	srpra	94	68.277	ENSSHAG00000009168	SRPRA	100	66.613	Sarcophilus_harrisii
ENSPLAG00000007323	srpra	100	79.530	ENSSFOG00015008837	srpra	100	80.537	Scleropages_formosus
ENSPLAG00000007323	srpra	100	82.680	ENSSMAG00000002783	srpra	100	82.459	Scophthalmus_maximus
ENSPLAG00000007323	srpra	100	89.724	ENSSDUG00000013920	srpra	100	88.416	Seriola_dumerili
ENSPLAG00000007323	srpra	100	89.571	ENSSLDG00000008601	srpra	93	89.571	Seriola_lalandi_dorsalis
ENSPLAG00000007323	srpra	82	85.366	ENSSARG00000012434	SRPRA	86	85.366	Sorex_araneus
ENSPLAG00000007323	srpra	100	68.778	ENSSPUG00000018221	SRPRA	100	67.428	Sphenodon_punctatus
ENSPLAG00000007323	srpra	100	90.337	ENSSPAG00000005103	srpra	100	89.724	Stegastes_partitus
ENSPLAG00000007323	srpra	100	69.605	ENSSSCG00000015227	SRPRA	100	67.629	Sus_scrofa
ENSPLAG00000007323	srpra	94	68.882	ENSTGUG00000000815	SRPRA	100	67.695	Taeniopygia_guttata
ENSPLAG00000007323	srpra	100	85.561	ENSTRUG00000006856	srpra	100	84.769	Takifugu_rubripes
ENSPLAG00000007323	srpra	100	78.582	ENSTNIG00000010316	srpra	100	78.884	Tetraodon_nigroviridis
ENSPLAG00000007323	srpra	100	67.820	ENSTTRG00000001558	SRPRA	100	66.968	Tursiops_truncatus
ENSPLAG00000007323	srpra	100	68.750	ENSUAMG00000005510	SRPRA	100	66.817	Ursus_americanus
ENSPLAG00000007323	srpra	89	71.078	ENSUMAG00000002269	SRPRA	100	61.120	Ursus_maritimus
ENSPLAG00000007323	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSPLAG00000007323	srpra	100	69.102	ENSVVUG00000020094	SRPRA	100	67.223	Vulpes_vulpes
ENSPLAG00000007323	srpra	100	59.314	ENSXETG00000003920	srpra	100	59.909	Xenopus_tropicalis
ENSPLAG00000007323	srpra	87	98.198	ENSXCOG00000001286	srpra	100	98.198	Xiphophorus_couchianus
ENSPLAG00000007323	srpra	100	95.846	ENSXMAG00000028401	srpra	100	95.846	Xiphophorus_maculatus