EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000007351 (Gene tree)
Gene ID: 106951812
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 20750 bases
Position: chrKQ545790.1:9227-29976
Accession: 106951812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000005439	XRN_N	PF03159.18	2.1e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000007943	-	3142	XM_015039521	ENSPLAP00000005439	892 (aa)	XP_014895007	-

Gene Model

Click here to download ENSPLAG00000007351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000007351	xrn2	96	74.419	ENSG00000088930	XRN2	89	74.419	Homo_sapiens
ENSPLAG00000007351	xrn2	97	87.687	ENSAPOG00000009818	xrn2	89	87.687	Acanthochromis_polyacanthus
ENSPLAG00000007351	xrn2	96	74.186	ENSAMEG00000012581	XRN2	89	74.186	Ailuropoda_melanoleuca
ENSPLAG00000007351	xrn2	97	81.561	ENSACIG00000015047	xrn2	95	87.048	Amphilophus_citrinellus
ENSPLAG00000007351	xrn2	97	88.493	ENSAOCG00000023632	xrn2	89	88.493	Amphiprion_ocellaris
ENSPLAG00000007351	xrn2	97	88.377	ENSAPEG00000014871	xrn2	89	88.377	Amphiprion_percula
ENSPLAG00000007351	xrn2	97	87.342	ENSATEG00000001273	xrn2	90	87.342	Anabas_testudineus
ENSPLAG00000007351	xrn2	94	74.021	ENSAPLG00000013869	XRN2	90	74.021	Anas_platyrhynchos
ENSPLAG00000007351	xrn2	97	73.858	ENSACAG00000005565	XRN2	90	74.027	Anolis_carolinensis
ENSPLAG00000007351	xrn2	96	74.302	ENSANAG00000020126	XRN2	89	74.302	Aotus_nancymaae
ENSPLAG00000007351	xrn2	98	85.436	ENSACLG00000010522	xrn2	98	85.436	Astatotilapia_calliptera
ENSPLAG00000007351	xrn2	96	82.814	ENSAMXG00000018301	xrn2	90	82.814	Astyanax_mexicanus
ENSPLAG00000007351	xrn2	96	73.953	ENSBTAG00000011304	XRN2	89	73.953	Bos_taurus
ENSPLAG00000007351	xrn2	93	53.676	WBGene00006964	xrn-2	87	53.721	Caenorhabditis_elegans
ENSPLAG00000007351	xrn2	96	74.070	ENSCJAG00000005611	XRN2	89	74.070	Callithrix_jacchus
ENSPLAG00000007351	xrn2	96	74.419	ENSCAFG00000005185	XRN2	89	74.419	Canis_familiaris
ENSPLAG00000007351	xrn2	96	74.419	ENSCAFG00020027479	XRN2	89	74.419	Canis_lupus_dingo
ENSPLAG00000007351	xrn2	96	74.070	ENSCHIG00000006921	XRN2	89	74.070	Capra_hircus
ENSPLAG00000007351	xrn2	96	74.186	ENSTSYG00000008315	XRN2	89	74.302	Carlito_syrichta
ENSPLAG00000007351	xrn2	93	63.876	ENSCAPG00000010773	XRN2	87	62.799	Cavia_aperea
ENSPLAG00000007351	xrn2	96	75.000	ENSCPOG00000009407	XRN2	89	75.000	Cavia_porcellus
ENSPLAG00000007351	xrn2	96	74.419	ENSCATG00000040350	XRN2	90	74.419	Cercocebus_atys
ENSPLAG00000007351	xrn2	96	74.767	ENSCLAG00000013419	XRN2	89	74.767	Chinchilla_lanigera
ENSPLAG00000007351	xrn2	96	74.419	ENSCSAG00000011094	XRN2	89	74.419	Chlorocebus_sabaeus
ENSPLAG00000007351	xrn2	65	87.097	ENSCHOG00000013404	XRN2	63	87.097	Choloepus_hoffmanni
ENSPLAG00000007351	xrn2	96	75.494	ENSCPBG00000023533	XRN2	89	75.494	Chrysemys_picta_bellii
ENSPLAG00000007351	xrn2	92	59.172	ENSCING00000022336	-	100	60.355	Ciona_intestinalis
ENSPLAG00000007351	xrn2	88	70.000	ENSCSAVG00000011217	-	93	71.084	Ciona_savignyi
ENSPLAG00000007351	xrn2	96	74.419	ENSCANG00000040240	XRN2	89	74.419	Colobus_angolensis_palliatus
ENSPLAG00000007351	xrn2	96	75.029	ENSCGRG00001010676	Xrn2	91	75.261	Cricetulus_griseus_chok1gshd
ENSPLAG00000007351	xrn2	93	74.012	ENSCGRG00000006378	Xrn2	89	74.251	Cricetulus_griseus_crigri
ENSPLAG00000007351	xrn2	58	80.192	ENSCSEG00000005628	xrn2	100	80.000	Cynoglossus_semilaevis
ENSPLAG00000007351	xrn2	98	88.562	ENSCVAG00000018999	xrn2	98	94.073	Cyprinodon_variegatus
ENSPLAG00000007351	xrn2	96	81.473	ENSDARG00000101900	xrn2	96	84.895	Danio_rerio
ENSPLAG00000007351	xrn2	96	74.419	ENSDNOG00000001895	XRN2	89	74.419	Dasypus_novemcinctus
ENSPLAG00000007351	xrn2	96	73.372	ENSDORG00000005434	Xrn2	89	73.372	Dipodomys_ordii
ENSPLAG00000007351	xrn2	93	54.982	FBgn0031868	Rat1	92	53.661	Drosophila_melanogaster
ENSPLAG00000007351	xrn2	96	63.869	ENSETEG00000001740	XRN2	81	80.292	Echinops_telfairi
ENSPLAG00000007351	xrn2	91	69.380	ENSEBUG00000016136	xrn2	100	69.380	Eptatretus_burgeri
ENSPLAG00000007351	xrn2	98	73.311	ENSEASG00005002484	XRN2	92	73.311	Equus_asinus_asinus
ENSPLAG00000007351	xrn2	92	92.308	ENSECAG00000018988	XRN2	88	92.308	Equus_caballus
ENSPLAG00000007351	xrn2	72	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSPLAG00000007351	xrn2	97	83.812	ENSELUG00000000552	xrn2	88	83.812	Esox_lucius
ENSPLAG00000007351	xrn2	96	74.070	ENSFCAG00000007970	XRN2	89	74.070	Felis_catus
ENSPLAG00000007351	xrn2	97	74.625	ENSFALG00000004508	XRN2	90	74.625	Ficedula_albicollis
ENSPLAG00000007351	xrn2	96	74.651	ENSFDAG00000016311	XRN2	89	74.651	Fukomys_damarensis
ENSPLAG00000007351	xrn2	58	86.398	ENSFHEG00000013039	xrn2	98	86.398	Fundulus_heteroclitus
ENSPLAG00000007351	xrn2	93	80.048	ENSGMOG00000013436	xrn2	100	80.048	Gadus_morhua
ENSPLAG00000007351	xrn2	97	74.053	ENSGALG00000008372	XRN2	90	74.053	Gallus_gallus
ENSPLAG00000007351	xrn2	98	98.402	ENSGAFG00000014284	xrn2	100	98.402	Gambusia_affinis
ENSPLAG00000007351	xrn2	94	81.840	ENSGACG00000011870	xrn2	96	86.948	Gasterosteus_aculeatus
ENSPLAG00000007351	xrn2	96	75.145	ENSGAGG00000004884	XRN2	89	75.145	Gopherus_agassizii
ENSPLAG00000007351	xrn2	96	74.419	ENSGGOG00000013738	XRN2	89	74.419	Gorilla_gorilla
ENSPLAG00000007351	xrn2	58	87.165	ENSHBUG00000005077	xrn2	94	87.165	Haplochromis_burtoni
ENSPLAG00000007351	xrn2	96	73.605	ENSHGLG00000014831	XRN2	89	73.605	Heterocephalus_glaber_female
ENSPLAG00000007351	xrn2	96	73.605	ENSHGLG00100013130	XRN2	89	73.605	Heterocephalus_glaber_male
ENSPLAG00000007351	xrn2	97	84.598	ENSHCOG00000011994	xrn2	94	81.307	Hippocampus_comes
ENSPLAG00000007351	xrn2	98	81.278	ENSIPUG00000006639	xrn2	92	81.278	Ictalurus_punctatus
ENSPLAG00000007351	xrn2	96	74.651	ENSSTOG00000000589	XRN2	89	74.651	Ictidomys_tridecemlineatus
ENSPLAG00000007351	xrn2	96	75.233	ENSJJAG00000022128	Xrn2	89	75.233	Jaculus_jaculus
ENSPLAG00000007351	xrn2	58	88.868	ENSLBEG00000010041	xrn2	100	88.868	Labrus_bergylta
ENSPLAG00000007351	xrn2	93	75.208	ENSLACG00000008307	XRN2	97	75.832	Latimeria_chalumnae
ENSPLAG00000007351	xrn2	95	77.908	ENSLOCG00000016874	xrn2	93	80.252	Lepisosteus_oculatus
ENSPLAG00000007351	xrn2	96	74.535	ENSLAFG00000014624	XRN2	89	74.535	Loxodonta_africana
ENSPLAG00000007351	xrn2	96	74.419	ENSMFAG00000038122	XRN2	89	74.419	Macaca_fascicularis
ENSPLAG00000007351	xrn2	96	74.419	ENSMMUG00000011405	XRN2	89	74.419	Macaca_mulatta
ENSPLAG00000007351	xrn2	96	74.302	ENSMNEG00000040626	XRN2	89	74.302	Macaca_nemestrina
ENSPLAG00000007351	xrn2	96	74.302	ENSMLEG00000041897	XRN2	89	74.302	Mandrillus_leucophaeus
ENSPLAG00000007351	xrn2	97	87.917	ENSMAMG00000008633	xrn2	90	87.917	Mastacembelus_armatus
ENSPLAG00000007351	xrn2	98	87.385	ENSMZEG00005022362	xrn2	98	87.385	Maylandia_zebra
ENSPLAG00000007351	xrn2	97	73.600	ENSMGAG00000003196	XRN2	90	73.600	Meleagris_gallopavo
ENSPLAG00000007351	xrn2	96	75.145	ENSMAUG00000021842	Xrn2	89	75.145	Mesocricetus_auratus
ENSPLAG00000007351	xrn2	98	72.278	ENSMICG00000008126	XRN2	92	72.278	Microcebus_murinus
ENSPLAG00000007351	xrn2	96	74.651	ENSMOCG00000012588	Xrn2	89	74.884	Microtus_ochrogaster
ENSPLAG00000007351	xrn2	98	84.938	ENSMMOG00000017576	xrn2	96	86.641	Mola_mola
ENSPLAG00000007351	xrn2	96	74.942	ENSMODG00000006163	XRN2	89	74.942	Monodelphis_domestica
ENSPLAG00000007351	xrn2	98	85.893	ENSMALG00000011355	xrn2	95	90.979	Monopterus_albus
ENSPLAG00000007351	xrn2	96	74.592	MGP_CAROLIEiJ_G0024400	Xrn2	89	74.592	Mus_caroli
ENSPLAG00000007351	xrn2	96	74.709	ENSMUSG00000027433	Xrn2	89	74.709	Mus_musculus
ENSPLAG00000007351	xrn2	96	74.592	MGP_PahariEiJ_G0025843	Xrn2	89	74.592	Mus_pahari
ENSPLAG00000007351	xrn2	96	74.709	MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	Mus_spretus
ENSPLAG00000007351	xrn2	96	72.748	ENSMPUG00000001198	XRN2	83	72.748	Mustela_putorius_furo
ENSPLAG00000007351	xrn2	96	74.272	ENSMLUG00000001536	XRN2	89	74.272	Myotis_lucifugus
ENSPLAG00000007351	xrn2	96	74.884	ENSNGAG00000018138	Xrn2	89	74.884	Nannospalax_galili
ENSPLAG00000007351	xrn2	98	87.385	ENSNBRG00000008062	xrn2	98	87.385	Neolamprologus_brichardi
ENSPLAG00000007351	xrn2	96	74.419	ENSNLEG00000009991	XRN2	89	74.419	Nomascus_leucogenys
ENSPLAG00000007351	xrn2	55	82.222	ENSMEUG00000008622	-	53	82.222	Notamacropus_eugenii
ENSPLAG00000007351	xrn2	66	71.579	ENSOPRG00000001397	-	63	71.579	Ochotona_princeps
ENSPLAG00000007351	xrn2	95	68.713	ENSODEG00000000860	-	91	68.241	Octodon_degus
ENSPLAG00000007351	xrn2	96	74.535	ENSODEG00000010745	-	89	74.535	Octodon_degus
ENSPLAG00000007351	xrn2	97	87.227	ENSONIG00000018720	xrn2	89	85.436	Oreochromis_niloticus
ENSPLAG00000007351	xrn2	96	75.233	ENSOANG00000015673	XRN2	89	75.233	Ornithorhynchus_anatinus
ENSPLAG00000007351	xrn2	96	75.000	ENSOCUG00000013468	XRN2	89	75.000	Oryctolagus_cuniculus
ENSPLAG00000007351	xrn2	98	86.682	ENSORLG00000017213	xrn2	98	86.682	Oryzias_latipes
ENSPLAG00000007351	xrn2	98	86.286	ENSORLG00020001824	xrn2	91	86.286	Oryzias_latipes_hni
ENSPLAG00000007351	xrn2	98	85.829	ENSORLG00015019747	xrn2	91	85.829	Oryzias_latipes_hsok
ENSPLAG00000007351	xrn2	98	85.714	ENSOMEG00000019820	xrn2	89	85.714	Oryzias_melastigma
ENSPLAG00000007351	xrn2	96	74.508	ENSOGAG00000001068	XRN2	89	74.508	Otolemur_garnettii
ENSPLAG00000007351	xrn2	93	73.381	ENSOARG00000004443	XRN2	89	73.381	Ovis_aries
ENSPLAG00000007351	xrn2	96	74.419	ENSPPAG00000033549	XRN2	89	74.419	Pan_paniscus
ENSPLAG00000007351	xrn2	96	74.070	ENSPPRG00000008732	XRN2	89	74.070	Panthera_pardus
ENSPLAG00000007351	xrn2	93	73.501	ENSPTIG00000015683	XRN2	87	73.501	Panthera_tigris_altaica
ENSPLAG00000007351	xrn2	96	74.419	ENSPTRG00000013308	XRN2	89	74.419	Pan_troglodytes
ENSPLAG00000007351	xrn2	96	74.419	ENSPANG00000018088	XRN2	89	74.419	Papio_anubis
ENSPLAG00000007351	xrn2	97	82.039	ENSPKIG00000016889	xrn2	89	82.039	Paramormyrops_kingsleyae
ENSPLAG00000007351	xrn2	87	76.221	ENSPSIG00000014666	XRN2	100	76.221	Pelodiscus_sinensis
ENSPLAG00000007351	xrn2	96	74.767	ENSPEMG00000000111	Xrn2	89	74.767	Peromyscus_maniculatus_bairdii
ENSPLAG00000007351	xrn2	99	98.198	ENSPFOG00000004182	xrn2	92	98.198	Poecilia_formosa
ENSPLAG00000007351	xrn2	93	97.602	ENSPMEG00000011798	xrn2	91	97.602	Poecilia_mexicana
ENSPLAG00000007351	xrn2	97	98.157	ENSPREG00000012452	xrn2	99	96.197	Poecilia_reticulata
ENSPLAG00000007351	xrn2	96	74.070	ENSPPYG00000010755	XRN2	89	74.070	Pongo_abelii
ENSPLAG00000007351	xrn2	95	70.720	ENSPCAG00000011191	XRN2	89	70.070	Procavia_capensis
ENSPLAG00000007351	xrn2	96	67.907	ENSPCOG00000016468	XRN2	88	67.907	Propithecus_coquereli
ENSPLAG00000007351	xrn2	88	65.639	ENSPVAG00000004596	XRN2	82	65.639	Pteropus_vampyrus
ENSPLAG00000007351	xrn2	98	85.436	ENSPNYG00000001765	xrn2	98	85.436	Pundamilia_nyererei
ENSPLAG00000007351	xrn2	98	80.449	ENSPNAG00000010956	xrn2	90	80.449	Pygocentrus_nattereri
ENSPLAG00000007351	xrn2	96	75.465	ENSRNOG00000011785	Xrn2	89	75.465	Rattus_norvegicus
ENSPLAG00000007351	xrn2	93	75.181	ENSRBIG00000036193	XRN2	100	75.301	Rhinopithecus_bieti
ENSPLAG00000007351	xrn2	96	74.419	ENSRROG00000044400	XRN2	81	74.419	Rhinopithecus_roxellana
ENSPLAG00000007351	xrn2	77	50.106	YOR048C	RAT1	63	53.883	Saccharomyces_cerevisiae
ENSPLAG00000007351	xrn2	96	74.302	ENSSBOG00000021014	XRN2	89	74.302	Saimiri_boliviensis_boliviensis
ENSPLAG00000007351	xrn2	96	82.827	ENSSFOG00015001091	xrn2	89	82.827	Scleropages_formosus
ENSPLAG00000007351	xrn2	97	87.011	ENSSMAG00000007834	xrn2	88	87.011	Scophthalmus_maximus
ENSPLAG00000007351	xrn2	98	85.666	ENSSDUG00000012802	xrn2	99	85.666	Seriola_dumerili
ENSPLAG00000007351	xrn2	97	87.802	ENSSLDG00000021273	xrn2	98	87.802	Seriola_lalandi_dorsalis
ENSPLAG00000007351	xrn2	59	96.000	ENSSARG00000005859	-	56	96.000	Sorex_araneus
ENSPLAG00000007351	xrn2	96	73.117	ENSSPUG00000005485	XRN2	88	73.117	Sphenodon_punctatus
ENSPLAG00000007351	xrn2	97	87.457	ENSSPAG00000016027	xrn2	89	87.457	Stegastes_partitus
ENSPLAG00000007351	xrn2	96	72.558	ENSSSCG00000007109	XRN2	89	72.558	Sus_scrofa
ENSPLAG00000007351	xrn2	97	73.188	ENSTGUG00000007535	XRN2	90	73.188	Taeniopygia_guttata
ENSPLAG00000007351	xrn2	98	83.010	ENSTRUG00000015489	xrn2	88	83.010	Takifugu_rubripes
ENSPLAG00000007351	xrn2	98	82.514	ENSTNIG00000010712	xrn2	90	82.514	Tetraodon_nigroviridis
ENSPLAG00000007351	xrn2	96	74.535	ENSTBEG00000004119	XRN2	89	74.535	Tupaia_belangeri
ENSPLAG00000007351	xrn2	89	77.249	ENSTTRG00000009087	XRN2	82	77.249	Tursiops_truncatus
ENSPLAG00000007351	xrn2	96	74.302	ENSUAMG00000024634	XRN2	92	72.907	Ursus_americanus
ENSPLAG00000007351	xrn2	93	73.501	ENSUMAG00000004012	XRN2	84	73.501	Ursus_maritimus
ENSPLAG00000007351	xrn2	76	82.524	ENSVPAG00000010694	XRN2	73	82.524	Vicugna_pacos
ENSPLAG00000007351	xrn2	96	74.302	ENSVVUG00000012178	XRN2	89	74.302	Vulpes_vulpes
ENSPLAG00000007351	xrn2	95	76.402	ENSXETG00000023501	xrn2	90	76.402	Xenopus_tropicalis
ENSPLAG00000007351	xrn2	99	96.396	ENSXMAG00000000242	xrn2	92	96.396	Xiphophorus_maculatus