EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000007399 (Gene tree)
Gene ID
106945780
Gene Symbol
polr2a
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Minus strand
Length
14104 bases
Position
chrKQ545475.1:340807-354910
Accession
106945780
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000022585RNA_pol_Rpb1_5PF04998.172.4e-10111
ENSPLAP00000005384RNA_pol_Rpb1_5PF04998.172.6e-10111
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23129
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23229
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23329
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23429
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23529
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23629
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23729
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23829
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-23929
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231029
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231129
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231229
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231329
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231429
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231529
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231629
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231729
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231829
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-231929
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232029
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232129
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232229
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232329
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232429
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232529
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232629
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232729
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232829
ENSPLAP00000022585RNA_pol_Rpb1_RPF05001.132.7e-232929
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18129
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18229
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18329
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18429
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18529
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18629
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18729
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18829
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-18929
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181029
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181129
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181229
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181329
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181429
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181529
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181629
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181729
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181829
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-181929
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182029
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182129
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182229
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182329
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182429
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182529
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182629
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182729
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182829
ENSPLAP00000005384RNA_pol_Rpb1_RPF05001.134.4e-182929
ENSPLAP00000022585RNA_pol_Rpb1_4PF05000.171.1e-3711
ENSPLAP00000005384RNA_pol_Rpb1_4PF05000.171.1e-3711
ENSPLAP00000022585RNA_pol_Rpb1_2PF00623.208.6e-7511
ENSPLAP00000005384RNA_pol_Rpb1_2PF00623.209.2e-7511
ENSPLAP00000022585RNA_pol_Rpb1_3PF04983.182e-5011
ENSPLAP00000005384RNA_pol_Rpb1_3PF04983.182.6e-5011
ENSPLAP00000022585RNA_pol_Rpb1_1PF04997.126.1e-10911
ENSPLAP00000005384RNA_pol_Rpb1_1PF04997.126.6e-10911
ENSPLAP00000005384RNA_pol_Rpb1_7PF04990.125.8e-5511
ENSPLAP00000022585RNA_pol_Rpb1_7PF04990.128.1e-3811
ENSPLAP00000005384RNA_pol_Rpb1_6PF04992.144.6e-6711
ENSPLAP00000022585RNA_pol_Rpb1_6PF04992.145e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000008095-5601-ENSPLAP000000225851866 (aa)--
ENSPLAT00000008036-8115XM_015029701ENSPLAP000000053841907 (aa)XP_014885187UPI0004447E23
Gene Model
Click here to download ENSPLAG00000007399's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007399's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000007399polr2a6034.286ENSPLAG00000021389polr1a6934.286
ENSPLAG00000007399polr2a7037.053ENSPLAG00000000997polr3a9137.053
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000007399polr2a8998.573ENSAPOG00000006552polr2a8898.573Acanthochromis_polyacanthus
ENSPLAG00000007399polr2a9994.238ENSAMEG00000016265-8594.245Ailuropoda_melanoleuca
ENSPLAG00000007399polr2a9996.932ENSACIG00000015982polr2a9996.932Amphilophus_citrinellus
ENSPLAG00000007399polr2a8598.697ENSAOCG00000004255polr2a8596.571Amphiprion_ocellaris
ENSPLAG00000007399polr2a9998.892ENSAPEG00000012623polr2a9998.892Amphiprion_percula
ENSPLAG00000007399polr2a9998.364ENSATEG00000019644polr2a9998.364Anabas_testudineus
ENSPLAG00000007399polr2a9994.720ENSACAG00000014561POLR2A8594.727Anolis_carolinensis
ENSPLAG00000007399polr2a9994.600ENSANAG00000020093-9192.436Aotus_nancymaae
ENSPLAG00000007399polr2a9998.153ENSACLG00000006735polr2a9998.153Astatotilapia_calliptera
ENSPLAG00000007399polr2a9997.731ENSAMXG00000020046polr2a9997.731Astyanax_mexicanus
ENSPLAG00000007399polr2a9994.600ENSBTAG00000046765POLR2A8594.606Bos_taurus
ENSPLAG00000007399polr2a9694.538ENSCAFG00000016532POLR2A9794.544Canis_familiaris
ENSPLAG00000007399polr2a9993.672ENSCAFG00020007929-9191.692Canis_lupus_dingo
ENSPLAG00000007399polr2a9994.600ENSCHIG00000027173-8594.606Capra_hircus
ENSPLAG00000007399polr2a9992.630ENSTSYG00000012803-9192.436Carlito_syrichta
ENSPLAG00000007399polr2a9891.051ENSCAPG00000001882-8893.616Cavia_aperea
ENSPLAG00000007399polr2a9991.038ENSCPOG00000014812-9193.428Cavia_porcellus
ENSPLAG00000007399polr2a9994.600ENSCCAG00000020938-9192.436Cebus_capucinus
ENSPLAG00000007399polr2a9994.600ENSCATG00000013680-9191.754Cercocebus_atys
ENSPLAG00000007399polr2a9994.475ENSCLAG00000012196-9192.312Chinchilla_lanigera
ENSPLAG00000007399polr2a9985.811ENSCSAG00000011644-8585.829Chlorocebus_sabaeus
ENSPLAG00000007399polr2a9590.932ENSCPBG00000012697POLR2A9983.667Chrysemys_picta_bellii
ENSPLAG00000007399polr2a9676.671ENSCING00000007884-8877.228Ciona_intestinalis
ENSPLAG00000007399polr2a9379.630ENSCSAVG00000008334-9979.605Ciona_savignyi
ENSPLAG00000007399polr2a9993.917ENSCANG00000010622-9190.915Colobus_angolensis_palliatus
ENSPLAG00000007399polr2a9086.897ENSCGRG00001003538Polr2a8987.373Cricetulus_griseus_chok1gshd
ENSPLAG00000007399polr2a8490.904ENSCGRG00000012105Polr2a8590.870Cricetulus_griseus_crigri
ENSPLAG00000007399polr2a9997.361ENSCSEG00000002635polr2a9997.361Cynoglossus_semilaevis
ENSPLAG00000007399polr2a9999.736ENSCVAG00000005156polr2a9999.736Cyprinodon_variegatus
ENSPLAG00000007399polr2a9997.416ENSDARG00000099966polr2a9997.416Danio_rerio
ENSPLAG00000007399polr2a9991.167ENSDNOG00000016482-8591.178Dasypus_novemcinctus
ENSPLAG00000007399polr2a9994.600ENSDORG00000008667Polr2a9192.436Dipodomys_ordii
ENSPLAG00000007399polr2a9970.095FBgn0003277RpII2159075.217Drosophila_melanogaster
ENSPLAG00000007399polr2a9490.407ENSETEG00000002540-8891.524Echinops_telfairi
ENSPLAG00000007399polr2a8487.274ENSEBUG00000013967polr2a8987.259Eptatretus_burgeri
ENSPLAG00000007399polr2a9990.534ENSEASG00005019114-9190.391Equus_asinus_asinus
ENSPLAG00000007399polr2a9994.600ENSECAG00000018485POLR2A8594.606Equus_caballus
ENSPLAG00000007399polr2a8694.459ENSEEUG00000001154-9594.459Erinaceus_europaeus
ENSPLAG00000007399polr2a9193.384ENSELUG00000014284polr2a8493.447Esox_lucius
ENSPLAG00000007399polr2a9994.538ENSFDAG00000008287-8594.544Fukomys_damarensis
ENSPLAG00000007399polr2a9999.472ENSFHEG00000001768polr2a9999.472Fundulus_heteroclitus
ENSPLAG00000007399polr2a9693.253ENSGMOG00000007725polr2a10093.281Gadus_morhua
ENSPLAG00000007399polr2a10094.661ENSGAFG00000005389polr2a10095.217Gambusia_affinis
ENSPLAG00000007399polr2a9994.015ENSGACG00000019366polr2a10093.792Gasterosteus_aculeatus
ENSPLAG00000007399polr2a9992.508ENSGGOG00000014800-9693.096Gorilla_gorilla
ENSPLAG00000007399polr2a9998.153ENSHBUG00000018937polr2a9998.153Haplochromis_burtoni
ENSPLAG00000007399polr2a9994.538ENSHGLG00000012381POLR2A9192.374Heterocephalus_glaber_female
ENSPLAG00000007399polr2a9994.538ENSHGLG00100014843POLR2A9192.374Heterocephalus_glaber_male
ENSPLAG00000007399polr2a9997.942ENSHCOG00000011874polr2a9997.942Hippocampus_comes
ENSPLAG00000007399polr2a9997.256ENSIPUG00000002613Polr2a9997.256Ictalurus_punctatus
ENSPLAG00000007399polr2a9994.600ENSSTOG00000001304-9192.436Ictidomys_tridecemlineatus
ENSPLAG00000007399polr2a9994.600ENSJJAG00000013049Polr2a9192.436Jaculus_jaculus
ENSPLAG00000007399polr2a8492.308ENSKMAG00000016343polr2a8692.308Kryptolebias_marmoratus
ENSPLAG00000007399polr2a9998.311ENSLBEG00000027652polr2a9998.311Labrus_bergylta
ENSPLAG00000007399polr2a9585.389ENSLACG00000012071POLR2A8885.461Latimeria_chalumnae
ENSPLAG00000007399polr2a8897.227ENSLOCG00000013863polr2a8696.772Lepisosteus_oculatus
ENSPLAG00000007399polr2a9994.600ENSLAFG00000008626-8694.606Loxodonta_africana
ENSPLAG00000007399polr2a5293.361ENSMFAG00000007042-9993.361Macaca_fascicularis
ENSPLAG00000007399polr2a9994.600ENSMMUG00000023620-9192.436Macaca_mulatta
ENSPLAG00000007399polr2a9994.165ENSMNEG00000040407-9192.683Macaca_nemestrina
ENSPLAG00000007399polr2a9890.127ENSMLEG00000030263-9993.361Mandrillus_leucophaeus
ENSPLAG00000007399polr2a9998.470ENSMAMG00000003351polr2a9998.470Mastacembelus_armatus
ENSPLAG00000007399polr2a9998.153ENSMZEG00005021429polr2a9998.153Maylandia_zebra
ENSPLAG00000007399polr2a5394.190ENSMAUG00000021055-9994.190Mesocricetus_auratus
ENSPLAG00000007399polr2a9994.538ENSMICG00000013372-9893.756Microcebus_murinus
ENSPLAG00000007399polr2a9990.025ENSMOCG00000018279Polr2a9790.235Microtus_ochrogaster
ENSPLAG00000007399polr2a9997.826ENSMMOG00000012515polr2a9697.826Mola_mola
ENSPLAG00000007399polr2a9994.351ENSMODG00000007009-8594.358Monodelphis_domestica
ENSPLAG00000007399polr2a9997.999ENSMALG00000008716polr2a9697.999Monopterus_albus
ENSPLAG00000007399polr2a9994.600MGP_CAROLIEiJ_G0016587Polr2a9192.436Mus_caroli
ENSPLAG00000007399polr2a9994.600ENSMUSG00000005198Polr2a9192.436Mus_musculus
ENSPLAG00000007399polr2a9992.460MGP_PahariEiJ_G0017718Polr2a8592.469Mus_pahari
ENSPLAG00000007399polr2a9994.600MGP_SPRETEiJ_G0017423Polr2a9192.436Mus_spretus
ENSPLAG00000007399polr2a9994.475ENSMPUG00000009648-8594.482Mustela_putorius_furo
ENSPLAG00000007399polr2a9993.986ENSMLUG00000009088-8593.994Myotis_lucifugus
ENSPLAG00000007399polr2a9994.600ENSNGAG00000002543Polr2a9192.436Nannospalax_galili
ENSPLAG00000007399polr2a9996.555ENSNBRG00000002005polr2a9996.555Neolamprologus_brichardi
ENSPLAG00000007399polr2a9993.127ENSNLEG00000009460-9192.436Nomascus_leucogenys
ENSPLAG00000007399polr2a9395.316ENSMEUG00000008611-9586.775Notamacropus_eugenii
ENSPLAG00000007399polr2a8394.315ENSOPRG00000015116-9994.315Ochotona_princeps
ENSPLAG00000007399polr2a7894.456ENSODEG00000017674-10089.914Octodon_degus
ENSPLAG00000007399polr2a9998.417ENSONIG00000009231polr2a9998.417Oreochromis_niloticus
ENSPLAG00000007399polr2a5093.991ENSOANG00000003303-9893.991Ornithorhynchus_anatinus
ENSPLAG00000007399polr2a9890.517ENSOCUG00000017929-9994.482Oryctolagus_cuniculus
ENSPLAG00000007399polr2a9998.681ENSORLG00000006431polr2a9998.681Oryzias_latipes
ENSPLAG00000007399polr2a9998.681ENSORLG00020010235polr2a9998.681Oryzias_latipes_hni
ENSPLAG00000007399polr2a9998.575ENSORLG00015007075polr2a9998.575Oryzias_latipes_hsok
ENSPLAG00000007399polr2a9798.382ENSOMEG00000010713polr2a10098.382Oryzias_melastigma
ENSPLAG00000007399polr2a9994.600ENSOGAG00000033608-8594.606Otolemur_garnettii
ENSPLAG00000007399polr2a8994.600ENSOARG00000013874-8994.606Ovis_aries
ENSPLAG00000007399polr2a9992.519ENSPPAG00000043734-8592.132Pan_paniscus
ENSPLAG00000007399polr2a9993.127ENSPTRG00000008691POLR2A9192.436Pan_troglodytes
ENSPLAG00000007399polr2a9993.917ENSPANG00000024099-9191.754Papio_anubis
ENSPLAG00000007399polr2a8095.721ENSPKIG00000005727polr2a8595.656Paramormyrops_kingsleyae
ENSPLAG00000007399polr2a9892.770ENSPSIG00000014006POLR2A10092.689Pelodiscus_sinensis
ENSPLAG00000007399polr2a10097.567ENSPMGG00000019734polr2a10097.567Periophthalmus_magnuspinnatus
ENSPLAG00000007399polr2a9994.600ENSPEMG00000012521Polr2a9192.436Peromyscus_maniculatus_bairdii
ENSPLAG00000007399polr2a8894.355ENSPCIG00000028851-8294.355Phascolarctos_cinereus
ENSPLAG00000007399polr2a100100.000ENSPFOG00000007890polr2a100100.000Poecilia_formosa
ENSPLAG00000007399polr2a100100.000ENSPMEG00000002071polr2a100100.000Poecilia_mexicana
ENSPLAG00000007399polr2a9999.947ENSPREG00000013122polr2a9999.947Poecilia_reticulata
ENSPLAG00000007399polr2a9390.385ENSPPYG00000007924-8294.606Pongo_abelii
ENSPLAG00000007399polr2a9194.868ENSPCAG00000006951-7794.868Procavia_capensis
ENSPLAG00000007399polr2a9993.296ENSPCOG00000025260-9192.436Propithecus_coquereli
ENSPLAG00000007399polr2a9994.289ENSPVAG00000005069-8594.296Pteropus_vampyrus
ENSPLAG00000007399polr2a9998.206ENSPNYG00000022340polr2a9998.206Pundamilia_nyererei
ENSPLAG00000007399polr2a9997.889ENSPNAG00000011237polr2a9997.889Pygocentrus_nattereri
ENSPLAG00000007399polr2a9994.538ENSRNOG00000028834Polr2a8594.544Rattus_norvegicus
ENSPLAG00000007399polr2a8494.227ENSRBIG00000002471-8694.234Rhinopithecus_bieti
ENSPLAG00000007399polr2a9694.600ENSRROG00000029583-8594.606Rhinopithecus_roxellana
ENSPLAG00000007399polr2a8680.769YDL140CRPO219882.090Saccharomyces_cerevisiae
ENSPLAG00000007399polr2a9994.600ENSSBOG00000000808-9192.436Saimiri_boliviensis_boliviensis
ENSPLAG00000007399polr2a8494.351ENSSHAG00000002858-8494.358Sarcophilus_harrisii
ENSPLAG00000007399polr2a9997.889ENSSFOG00015023275polr2a9997.889Scleropages_formosus
ENSPLAG00000007399polr2a9994.040ENSSMAG00000009137polr2a8597.705Scophthalmus_maximus
ENSPLAG00000007399polr2a9998.575ENSSDUG00000020466polr2a9998.575Seriola_dumerili
ENSPLAG00000007399polr2a9998.522ENSSLDG00000020613polr2a9998.522Seriola_lalandi_dorsalis
ENSPLAG00000007399polr2a9890.191ENSSARG00000005875-9991.016Sorex_araneus
ENSPLAG00000007399polr2a10098.629ENSSPAG00000016741polr2a9598.629Stegastes_partitus
ENSPLAG00000007399polr2a9993.669ENSSSCG00000028278-8593.676Sus_scrofa
ENSPLAG00000007399polr2a9992.374ENSTRUG00000012320polr2a8192.374Takifugu_rubripes
ENSPLAG00000007399polr2a9796.712ENSTNIG00000010136polr2a10096.712Tetraodon_nigroviridis
ENSPLAG00000007399polr2a7394.481ENSTBEG00000013294-5694.481Tupaia_belangeri
ENSPLAG00000007399polr2a9992.924ENSTTRG00000014273-8592.932Tursiops_truncatus
ENSPLAG00000007399polr2a9989.286ENSUAMG00000014866-9591.651Ursus_americanus
ENSPLAG00000007399polr2a9291.991ENSUMAG00000015732-8789.944Ursus_maritimus
ENSPLAG00000007399polr2a6498.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSPLAG00000007399polr2a8494.538ENSVVUG00000027878-8394.544Vulpes_vulpes
ENSPLAG00000007399polr2a8990.189ENSXETG00000012465polr2a9090.201Xenopus_tropicalis
ENSPLAG00000007399polr2a9597.243ENSXCOG00000001804polr2a9997.243Xiphophorus_couchianus
ENSPLAG00000007399polr2a9999.894ENSXMAG00000015687polr2a9999.894Xiphophorus_maculatus

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