EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000007518 (Gene tree)
Gene ID
106951800
Gene Symbol
polr1b
Alias
-
Full Name
RNA polymerase I subunit B
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
13003 bases
Position
chrKQ545789.1:218628-231630
Accession
106951800
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000022750RNA_pol_Rpa2_4PF06883.127.3e-2211
ENSPLAP00000022750RNA_pol_Rpb2_1PF04563.158.9e-3711
ENSPLAP00000022750RNA_pol_Rpb2_2PF04561.142.7e-0811
ENSPLAP00000022750RNA_pol_Rpb2_3PF04565.163e-2811
ENSPLAP00000022750RNA_pol_Rpb2_7PF04560.206.3e-2111
ENSPLAP00000022750RNA_pol_Rpb2_6PF00562.284.6e-11411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000007736-3734XM_015039505ENSPLAP000000227501134 (aa)XP_014894991UPI00072E4E1C
Gene Model
Click here to download ENSPLAG00000007518's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007518's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000007518polr1b7532.796ENSPLAG00000015107polr3b7932.796
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000007518polr1b9976.367ENSG00000125630POLR1B9982.246Homo_sapiens
ENSPLAG00000007518polr1b9130.127ENSAPOG00000018360polr3b9830.127Acanthochromis_polyacanthus
ENSPLAG00000007518polr1b10088.272ENSAPOG00000000931polr1b10088.272Acanthochromis_polyacanthus
ENSPLAG00000007518polr1b9976.543ENSAMEG00000010826POLR1B9976.543Ailuropoda_melanoleuca
ENSPLAG00000007518polr1b10087.743ENSACIG00000002290polr1b10087.743Amphilophus_citrinellus
ENSPLAG00000007518polr1b10087.919ENSAOCG00000004249polr1b10087.919Amphiprion_ocellaris
ENSPLAG00000007518polr1b10088.007ENSAPEG00000004971polr1b10088.007Amphiprion_percula
ENSPLAG00000007518polr1b10088.272ENSATEG00000010957polr1b10088.272Anabas_testudineus
ENSPLAG00000007518polr1b9468.505ENSAPLG00000004142POLR1B9968.505Anas_platyrhynchos
ENSPLAG00000007518polr1b6178.292ENSACAG00000007117-9978.582Anolis_carolinensis
ENSPLAG00000007518polr1b5169.297ENSACAG00000005660POLR1B9969.297Anolis_carolinensis
ENSPLAG00000007518polr1b9976.388ENSANAG00000026201POLR1B9981.555Aotus_nancymaae
ENSPLAG00000007518polr1b10088.448ENSACLG00000019089polr1b10088.448Astatotilapia_calliptera
ENSPLAG00000007518polr1b10081.746ENSAMXG00000037818polr1b10081.746Astyanax_mexicanus
ENSPLAG00000007518polr1b9976.367ENSBTAG00000014166POLR1B9976.367Bos_taurus
ENSPLAG00000007518polr1b9745.438WBGene00008781rpoa-29945.438Caenorhabditis_elegans
ENSPLAG00000007518polr1b9976.279ENSCJAG00000016433POLR1B9981.884Callithrix_jacchus
ENSPLAG00000007518polr1b9976.102ENSCAFG00000007174POLR1B9976.102Canis_familiaris
ENSPLAG00000007518polr1b9976.190ENSCAFG00020017367POLR1B9976.190Canis_lupus_dingo
ENSPLAG00000007518polr1b9976.543ENSCHIG00000014527POLR1B9976.543Capra_hircus
ENSPLAG00000007518polr1b9975.309ENSTSYG00000003669POLR1B9979.891Carlito_syrichta
ENSPLAG00000007518polr1b9082.493ENSCAPG00000012821POLR1B8582.493Cavia_aperea
ENSPLAG00000007518polr1b8636.681ENSCPOG00000004891POLR3B8636.681Cavia_porcellus
ENSPLAG00000007518polr1b9975.220ENSCPOG00000015744POLR1B9975.220Cavia_porcellus
ENSPLAG00000007518polr1b9976.543ENSCCAG00000035252POLR1B9981.884Cebus_capucinus
ENSPLAG00000007518polr1b6937.336ENSCATG00000035334POLR3B7137.336Cercocebus_atys
ENSPLAG00000007518polr1b9976.367ENSCATG00000037382POLR1B9982.065Cercocebus_atys
ENSPLAG00000007518polr1b9975.397ENSCLAG00000004899POLR1B9975.397Chinchilla_lanigera
ENSPLAG00000007518polr1b9976.543ENSCSAG00000016783POLR1B9976.543Chlorocebus_sabaeus
ENSPLAG00000007518polr1b8577.526ENSCHOG00000007229POLR1B9977.526Choloepus_hoffmanni
ENSPLAG00000007518polr1b9578.977ENSCPBG00000003962POLR1B9979.665Chrysemys_picta_bellii
ENSPLAG00000007518polr1b9954.152ENSCING00000003329-9954.457Ciona_intestinalis
ENSPLAG00000007518polr1b9040.702ENSCSAVG00000000129-8340.702Ciona_savignyi
ENSPLAG00000007518polr1b7433.517ENSCSAVG00000007982-8831.932Ciona_savignyi
ENSPLAG00000007518polr1b9976.279ENSCANG00000039531POLR1B9981.522Colobus_angolensis_palliatus
ENSPLAG00000007518polr1b9975.750ENSCGRG00001014254Polr1b9975.750Cricetulus_griseus_chok1gshd
ENSPLAG00000007518polr1b9975.661ENSCGRG00000017847Polr1b9975.661Cricetulus_griseus_crigri
ENSPLAG00000007518polr1b10085.097ENSCSEG00000008564polr1b10085.097Cynoglossus_semilaevis
ENSPLAG00000007518polr1b10092.152ENSCVAG00000005824polr1b10092.152Cyprinodon_variegatus
ENSPLAG00000007518polr1b9980.514ENSDARG00000077469polr1b9980.514Danio_rerio
ENSPLAG00000007518polr1b9975.893ENSDNOG00000017718POLR1B9875.838Dasypus_novemcinctus
ENSPLAG00000007518polr1b9975.573ENSDORG00000014309Polr1b9975.573Dipodomys_ordii
ENSPLAG00000007518polr1b9845.349FBgn0003278RpI1359845.349Drosophila_melanogaster
ENSPLAG00000007518polr1b5238.655ENSETEG00000011734POLR2B5338.655Echinops_telfairi
ENSPLAG00000007518polr1b5533.926ENSETEG00000017715POLR3B6033.926Echinops_telfairi
ENSPLAG00000007518polr1b8979.006ENSETEG00000004001POLR1B8979.006Echinops_telfairi
ENSPLAG00000007518polr1b6032.969ENSEBUG00000010186-6632.969Eptatretus_burgeri
ENSPLAG00000007518polr1b6371.088ENSEBUG00000015791polr1b9958.500Eptatretus_burgeri
ENSPLAG00000007518polr1b9976.190ENSEASG00005006504POLR1B9976.190Equus_asinus_asinus
ENSPLAG00000007518polr1b8743.443ENSEASG00005021189POLR3B9243.443Equus_asinus_asinus
ENSPLAG00000007518polr1b9976.190ENSECAG00000010062POLR1B9976.190Equus_caballus
ENSPLAG00000007518polr1b7432.000ENSEEUG00000009798POLR2B7532.000Erinaceus_europaeus
ENSPLAG00000007518polr1b7688.014ENSEEUG00000004559-8088.014Erinaceus_europaeus
ENSPLAG00000007518polr1b9130.082ENSELUG00000023988polr3b9530.082Esox_lucius
ENSPLAG00000007518polr1b10083.157ENSELUG00000019627polr1b10083.157Esox_lucius
ENSPLAG00000007518polr1b9976.543ENSFCAG00000008091POLR1B9981.159Felis_catus
ENSPLAG00000007518polr1b8969.436ENSFALG00000000717POLR1B10069.436Ficedula_albicollis
ENSPLAG00000007518polr1b9975.132ENSFDAG00000020976POLR1B9975.132Fukomys_damarensis
ENSPLAG00000007518polr1b7341.497ENSFHEG00000008215polr3b7541.497Fundulus_heteroclitus
ENSPLAG00000007518polr1b8689.169ENSFHEG00000000533polr1b9389.169Fundulus_heteroclitus
ENSPLAG00000007518polr1b9272.553ENSGMOG00000005847polr1b10072.553Gadus_morhua
ENSPLAG00000007518polr1b9568.651ENSGALG00000032273POLR1B9668.651Gallus_gallus
ENSPLAG00000007518polr1b10097.354ENSGAFG00000001383polr1b10097.354Gambusia_affinis
ENSPLAG00000007518polr1b10084.947ENSGACG00000003012polr1b10084.947Gasterosteus_aculeatus
ENSPLAG00000007518polr1b9578.326ENSGAGG00000016312POLR1B9978.794Gopherus_agassizii
ENSPLAG00000007518polr1b9976.279ENSGGOG00000013494POLR1B9982.065Gorilla_gorilla
ENSPLAG00000007518polr1b10088.448ENSHBUG00000012650polr1b10088.448Haplochromis_burtoni
ENSPLAG00000007518polr1b9975.044ENSHGLG00000011497POLR1B9975.044Heterocephalus_glaber_female
ENSPLAG00000007518polr1b9974.427ENSHGLG00100009371POLR1B9974.427Heterocephalus_glaber_male
ENSPLAG00000007518polr1b10080.335ENSHCOG00000000709polr1b10080.335Hippocampus_comes
ENSPLAG00000007518polr1b10082.363ENSIPUG00000018216polr1b10082.363Ictalurus_punctatus
ENSPLAG00000007518polr1b9130.356ENSIPUG00000016720Polr3b9630.356Ictalurus_punctatus
ENSPLAG00000007518polr1b9577.281ENSSTOG00000008160POLR1B9977.281Ictidomys_tridecemlineatus
ENSPLAG00000007518polr1b9970.246ENSJJAG00000000143Polr1b9970.246Jaculus_jaculus
ENSPLAG00000007518polr1b10087.831ENSKMAG00000016037polr1b10087.831Kryptolebias_marmoratus
ENSPLAG00000007518polr1b10081.393ENSLBEG00000027396polr1b10081.658Labrus_bergylta
ENSPLAG00000007518polr1b10079.119ENSLACG00000009481POLR1B10079.119Latimeria_chalumnae
ENSPLAG00000007518polr1b9981.211ENSLOCG00000016558polr1b9981.211Lepisosteus_oculatus
ENSPLAG00000007518polr1b9975.726ENSLAFG00000007659POLR1B9981.013Loxodonta_africana
ENSPLAG00000007518polr1b8532.884ENSMFAG00000038425POLR3B8932.884Macaca_fascicularis
ENSPLAG00000007518polr1b9976.476ENSMFAG00000032912POLR1B9981.884Macaca_fascicularis
ENSPLAG00000007518polr1b9976.476ENSMMUG00000009468POLR1B9981.884Macaca_mulatta
ENSPLAG00000007518polr1b9976.455ENSMNEG00000036047POLR1B9982.065Macaca_nemestrina
ENSPLAG00000007518polr1b9972.751ENSMLEG00000030588POLR1B9982.065Mandrillus_leucophaeus
ENSPLAG00000007518polr1b10087.743ENSMAMG00000013118polr1b10087.743Mastacembelus_armatus
ENSPLAG00000007518polr1b10088.448ENSMZEG00005011850polr1b10088.448Maylandia_zebra
ENSPLAG00000007518polr1b9269.607ENSMGAG00000007074POLR1B9969.607Meleagris_gallopavo
ENSPLAG00000007518polr1b8473.810ENSMAUG00000010593Polr1b9673.810Mesocricetus_auratus
ENSPLAG00000007518polr1b9976.279ENSMICG00000013245POLR1B9976.279Microcebus_murinus
ENSPLAG00000007518polr1b9975.750ENSMOCG00000005942Polr1b9975.750Microtus_ochrogaster
ENSPLAG00000007518polr1b10086.079ENSMMOG00000008388polr1b10086.079Mola_mola
ENSPLAG00000007518polr1b9978.042ENSMODG00000006573POLR1B9978.042Monodelphis_domestica
ENSPLAG00000007518polr1b10085.273ENSMALG00000008958polr1b10085.273Monopterus_albus
ENSPLAG00000007518polr1b9577.023MGP_CAROLIEiJ_G0024281Polr1b9977.023Mus_caroli
ENSPLAG00000007518polr1b9974.956ENSMUSG00000027395Polr1b9974.956Mus_musculus
ENSPLAG00000007518polr1b9976.014MGP_PahariEiJ_G0025726Polr1b9976.014Mus_pahari
ENSPLAG00000007518polr1b8637.336MGP_PahariEiJ_G0031407Polr3b8837.336Mus_pahari
ENSPLAG00000007518polr1b9975.132MGP_SPRETEiJ_G0025201Polr1b9975.132Mus_spretus
ENSPLAG00000007518polr1b9972.663ENSMPUG00000009644POLR1B9972.663Mustela_putorius_furo
ENSPLAG00000007518polr1b9976.896ENSMLUG00000004910POLR1B9976.896Myotis_lucifugus
ENSPLAG00000007518polr1b9975.838ENSNGAG00000021472Polr1b9975.838Nannospalax_galili
ENSPLAG00000007518polr1b10088.272ENSNBRG00000017979polr1b10088.272Neolamprologus_brichardi
ENSPLAG00000007518polr1b9973.104ENSNLEG00000001656POLR1B9981.703Nomascus_leucogenys
ENSPLAG00000007518polr1b7579.947ENSMEUG00000013915POLR1B7579.947Notamacropus_eugenii
ENSPLAG00000007518polr1b5336.986ENSOPRG00000008568POLR3B5436.986Ochotona_princeps
ENSPLAG00000007518polr1b9975.132ENSOPRG00000012742POLR1B9975.132Ochotona_princeps
ENSPLAG00000007518polr1b9969.400ENSODEG00000005501POLR1B9969.400Octodon_degus
ENSPLAG00000007518polr1b10088.448ENSONIG00000010382polr1b10088.448Oreochromis_niloticus
ENSPLAG00000007518polr1b9279.886ENSOANG00000003621POLR1B9979.886Ornithorhynchus_anatinus
ENSPLAG00000007518polr1b9976.279ENSOCUG00000006058POLR1B9976.279Oryctolagus_cuniculus
ENSPLAG00000007518polr1b10087.665ENSORLG00000000890polr1b10087.665Oryzias_latipes
ENSPLAG00000007518polr1b10087.665ENSORLG00015011105polr1b10087.665Oryzias_latipes_hsok
ENSPLAG00000007518polr1b10086.872ENSOMEG00000005073polr1b10086.872Oryzias_melastigma
ENSPLAG00000007518polr1b9976.190ENSOGAG00000007367POLR1B9776.190Otolemur_garnettii
ENSPLAG00000007518polr1b9976.564ENSOARG00000020904POLR1B9976.564Ovis_aries
ENSPLAG00000007518polr1b9976.279ENSPPAG00000002774POLR1B9982.065Pan_paniscus
ENSPLAG00000007518polr1b9976.720ENSPPRG00000005760POLR1B9981.341Panthera_pardus
ENSPLAG00000007518polr1b9976.720ENSPTIG00000013496POLR1B9981.341Panthera_tigris_altaica
ENSPLAG00000007518polr1b9976.279ENSPTRG00000012366POLR1B9981.884Pan_troglodytes
ENSPLAG00000007518polr1b9976.367ENSPANG00000023423POLR1B9982.065Papio_anubis
ENSPLAG00000007518polr1b9154.762ENSPKIG00000000008polr2b8854.762Paramormyrops_kingsleyae
ENSPLAG00000007518polr1b10078.483ENSPKIG00000007536polr1b10078.483Paramormyrops_kingsleyae
ENSPLAG00000007518polr1b9677.982ENSPSIG00000002443POLR1B9977.982Pelodiscus_sinensis
ENSPLAG00000007518polr1b10083.686ENSPMGG00000021622polr1b10083.686Periophthalmus_magnuspinnatus
ENSPLAG00000007518polr1b9976.014ENSPEMG00000008619Polr1b9383.444Peromyscus_maniculatus_bairdii
ENSPLAG00000007518polr1b7030.724ENSPMAG00000001164-9330.724Petromyzon_marinus
ENSPLAG00000007518polr1b7432.884ENSPCIG00000009510POLR3B7732.884Phascolarctos_cinereus
ENSPLAG00000007518polr1b9977.954ENSPCIG00000029738POLR1B9577.954Phascolarctos_cinereus
ENSPLAG00000007518polr1b10099.824ENSPFOG00000010484polr1b10099.824Poecilia_formosa
ENSPLAG00000007518polr1b10099.647ENSPMEG00000006810polr1b10099.647Poecilia_mexicana
ENSPLAG00000007518polr1b10098.765ENSPREG00000002867polr1b10098.765Poecilia_reticulata
ENSPLAG00000007518polr1b9976.190ENSPPYG00000012168POLR1B9976.190Pongo_abelii
ENSPLAG00000007518polr1b7149.606ENSPCAG00000000881POLR3B7249.606Procavia_capensis
ENSPLAG00000007518polr1b9966.960ENSPCAG00000013293POLR1B9966.960Procavia_capensis
ENSPLAG00000007518polr1b9976.102ENSPCOG00000015852POLR1B9676.102Propithecus_coquereli
ENSPLAG00000007518polr1b9272.323ENSPVAG00000005727POLR1B9272.323Pteropus_vampyrus
ENSPLAG00000007518polr1b6937.336ENSPVAG00000005861POLR3B6737.336Pteropus_vampyrus
ENSPLAG00000007518polr1b8137.831ENSPVAG00000010951POLR2B7937.831Pteropus_vampyrus
ENSPLAG00000007518polr1b10088.272ENSPNYG00000004767polr1b10088.272Pundamilia_nyererei
ENSPLAG00000007518polr1b10082.187ENSPNAG00000013503polr1b9582.187Pygocentrus_nattereri
ENSPLAG00000007518polr1b9970.696ENSRNOG00000018349Polr1b9970.696Rattus_norvegicus
ENSPLAG00000007518polr1b9976.367ENSRBIG00000019757POLR1B9981.884Rhinopithecus_bieti
ENSPLAG00000007518polr1b9842.966YPR010CRPA1359742.966Saccharomyces_cerevisiae
ENSPLAG00000007518polr1b9976.279ENSSBOG00000024562POLR1B9981.703Saimiri_boliviensis_boliviensis
ENSPLAG00000007518polr1b10076.728ENSSFOG00015004632polr1b10076.728Scleropages_formosus
ENSPLAG00000007518polr1b10087.213ENSSMAG00000013682polr1b10087.213Scophthalmus_maximus
ENSPLAG00000007518polr1b10088.007ENSSDUG00000019471polr1b10088.007Seriola_dumerili
ENSPLAG00000007518polr1b6936.567ENSSARG00000013960POLR3B8336.567Sorex_araneus
ENSPLAG00000007518polr1b8177.814ENSSPUG00000014298POLR1B10077.814Sphenodon_punctatus
ENSPLAG00000007518polr1b10088.624ENSSPAG00000006345polr1b10088.624Stegastes_partitus
ENSPLAG00000007518polr1b9976.896ENSSSCG00000008098POLR1B9973.104Sus_scrofa
ENSPLAG00000007518polr1b9230.063ENSSSCG00000000169POLR3B9630.063Sus_scrofa
ENSPLAG00000007518polr1b9169.595ENSTGUG00000005237POLR1B10069.595Taeniopygia_guttata
ENSPLAG00000007518polr1b10083.245ENSTRUG00000006581polr1b10083.245Takifugu_rubripes
ENSPLAG00000007518polr1b9983.245ENSTNIG00000002722polr1b9983.245Tetraodon_nigroviridis
ENSPLAG00000007518polr1b7342.177ENSTBEG00000017278POLR3B7142.177Tupaia_belangeri
ENSPLAG00000007518polr1b9976.455ENSTTRG00000010988POLR1B9976.455Tursiops_truncatus
ENSPLAG00000007518polr1b8533.198ENSTTRG00000010682POLR3B8433.198Tursiops_truncatus
ENSPLAG00000007518polr1b9676.860ENSUAMG00000022527-9976.860Ursus_americanus
ENSPLAG00000007518polr1b9976.543ENSUMAG00000008619POLR1B9978.360Ursus_maritimus
ENSPLAG00000007518polr1b6340.940ENSVPAG00000010478POLR3B6240.940Vicugna_pacos
ENSPLAG00000007518polr1b9371.260ENSVPAG00000011111POLR1B9371.260Vicugna_pacos
ENSPLAG00000007518polr1b9976.014ENSVVUG00000028670POLR1B9877.209Vulpes_vulpes
ENSPLAG00000007518polr1b8532.884ENSVVUG00000023101POLR3B8932.884Vulpes_vulpes
ENSPLAG00000007518polr1b9973.898ENSXETG00000013749polr1b9973.898Xenopus_tropicalis
ENSPLAG00000007518polr1b7433.060ENSXETG00000005721polr3b7533.060Xenopus_tropicalis
ENSPLAG00000007518polr1b10097.884ENSXCOG00000006080polr1b10097.884Xiphophorus_couchianus
ENSPLAG00000007518polr1b10098.060ENSXMAG00000007723polr1b10098.060Xiphophorus_maculatus

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