EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000007773 (Gene tree)
Gene ID: 106942786
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3728 bases
Position: chrKQ545412.1:177761-181488
Accession: 106942786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000005783	MMR_HSR1	PF01926.23	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000007349	-	1904	XM_015026126	ENSPLAP00000005783	222 (aa)	XP_014881612	UPI0004438B24

Gene Model

Click here to download ENSPLAG00000007773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000007773	si:dkey-34d22.5	75	30.357	ENSPLAG00000003951	rasd4	77	30.357
ENSPLAG00000007773	si:dkey-34d22.5	51	39.474	ENSPLAG00000019120	-	57	39.474
ENSPLAG00000007773	si:dkey-34d22.5	74	41.420	ENSPLAG00000007015	rab9a	78	41.420
ENSPLAG00000007773	si:dkey-34d22.5	70	30.769	ENSPLAG00000011855	si:ch73-116o1.2	79	30.952
ENSPLAG00000007773	si:dkey-34d22.5	97	41.935	ENSPLAG00000022515	-	97	41.935
ENSPLAG00000007773	si:dkey-34d22.5	97	32.883	ENSPLAG00000014243	rab11ba	95	32.883
ENSPLAG00000007773	si:dkey-34d22.5	76	41.420	ENSPLAG00000015592	-	82	41.420
ENSPLAG00000007773	si:dkey-34d22.5	75	35.542	ENSPLAG00000016333	-	74	35.542
ENSPLAG00000007773	si:dkey-34d22.5	71	36.646	ENSPLAG00000019688	si:dkey-13a21.4	77	36.646
ENSPLAG00000007773	si:dkey-34d22.5	95	33.649	ENSPLAG00000005074	rab34b	80	33.649
ENSPLAG00000007773	si:dkey-34d22.5	80	37.234	ENSPLAG00000011866	rab9b	83	37.234
ENSPLAG00000007773	si:dkey-34d22.5	75	35.119	ENSPLAG00000015685	rabl2	72	35.119
ENSPLAG00000007773	si:dkey-34d22.5	74	43.195	ENSPLAG00000006777	-	74	43.195
ENSPLAG00000007773	si:dkey-34d22.5	98	50.917	ENSPLAG00000007237	RAB39B	98	50.917
ENSPLAG00000007773	si:dkey-34d22.5	74	44.848	ENSPLAG00000006354	rab15	76	44.848
ENSPLAG00000007773	si:dkey-34d22.5	72	34.591	ENSPLAG00000009163	rras	79	34.591
ENSPLAG00000007773	si:dkey-34d22.5	97	34.404	ENSPLAG00000011175	rab11a	95	34.404
ENSPLAG00000007773	si:dkey-34d22.5	72	40.373	ENSPLAG00000013594	rab12	64	40.373
ENSPLAG00000007773	si:dkey-34d22.5	78	32.203	ENSPLAG00000002600	RAB29	80	32.203
ENSPLAG00000007773	si:dkey-34d22.5	78	33.333	ENSPLAG00000022991	rab34a	62	33.333
ENSPLAG00000007773	si:dkey-34d22.5	97	36.574	ENSPLAG00000023374	rab2a	99	36.574
ENSPLAG00000007773	si:dkey-34d22.5	97	39.352	ENSPLAG00000020989	rab35b	98	39.352
ENSPLAG00000007773	si:dkey-34d22.5	97	33.032	ENSPLAG00000014207	-	95	33.032
ENSPLAG00000007773	si:dkey-34d22.5	76	41.420	ENSPLAG00000006520	rab1ab	81	41.420
ENSPLAG00000007773	si:dkey-34d22.5	78	41.040	ENSPLAG00000005869	zgc:171927	79	41.040
ENSPLAG00000007773	si:dkey-34d22.5	75	35.542	ENSPLAG00000017232	rab22a	85	36.478
ENSPLAG00000007773	si:dkey-34d22.5	76	42.262	ENSPLAG00000023128	RAB15	78	42.262
ENSPLAG00000007773	si:dkey-34d22.5	77	38.012	ENSPLAG00000007986	rab11al	77	38.012
ENSPLAG00000007773	si:dkey-34d22.5	75	35.542	ENSPLAG00000018718	rab22a	84	35.542
ENSPLAG00000007773	si:dkey-34d22.5	77	36.257	ENSPLAG00000001598	rab11bb	77	36.257
ENSPLAG00000007773	si:dkey-34d22.5	79	39.205	ENSPLAG00000018655	rab1ba	86	39.205
ENSPLAG00000007773	si:dkey-34d22.5	67	42.763	ENSPLAG00000016172	-	63	42.763
ENSPLAG00000007773	si:dkey-34d22.5	77	40.000	ENSPLAG00000000376	rab41	77	40.000
ENSPLAG00000007773	si:dkey-34d22.5	77	41.860	ENSPLAG00000021043	si:dkey-16l2.16	80	41.860
ENSPLAG00000007773	si:dkey-34d22.5	76	42.012	ENSPLAG00000003181	-	83	42.012
ENSPLAG00000007773	si:dkey-34d22.5	69	40.385	ENSPLAG00000021278	rab33ba	61	41.447
ENSPLAG00000007773	si:dkey-34d22.5	92	33.014	ENSPLAG00000002799	RAB7A	95	33.014
ENSPLAG00000007773	si:dkey-34d22.5	75	36.747	ENSPLAG00000004790	rab5c	90	32.710
ENSPLAG00000007773	si:dkey-34d22.5	98	50.917	ENSPLAG00000018322	-	98	50.917
ENSPLAG00000007773	si:dkey-34d22.5	77	38.824	ENSPLAG00000019707	rab6bb	78	38.824
ENSPLAG00000007773	si:dkey-34d22.5	70	32.903	ENSPLAG00000009352	KRAS	98	31.217
ENSPLAG00000007773	si:dkey-34d22.5	85	37.113	ENSPLAG00000005189	rab33a	85	37.113
ENSPLAG00000007773	si:dkey-34d22.5	71	34.177	ENSPLAG00000015650	rhebl1	84	34.177
ENSPLAG00000007773	si:dkey-34d22.5	74	41.420	ENSPLAG00000022926	rab9a	82	41.420
ENSPLAG00000007773	si:dkey-34d22.5	97	32.870	ENSPLAG00000008004	rab25b	95	32.870
ENSPLAG00000007773	si:dkey-34d22.5	67	40.667	ENSPLAG00000020627	zgc:101559	63	40.667
ENSPLAG00000007773	si:dkey-34d22.5	90	36.453	ENSPLAG00000022260	rab6ba	94	36.453
ENSPLAG00000007773	si:dkey-34d22.5	91	33.333	ENSPLAG00000001065	-	94	33.333
ENSPLAG00000007773	si:dkey-34d22.5	86	60.000	ENSPLAG00000005628	rab42a	86	60.000
ENSPLAG00000007773	si:dkey-34d22.5	75	43.114	ENSPLAG00000015383	rab30	80	43.114
ENSPLAG00000007773	si:dkey-34d22.5	78	32.759	ENSPLAG00000003379	hrasb	86	32.738
ENSPLAG00000007773	si:dkey-34d22.5	87	30.392	ENSPLAG00000004043	rasl11a	77	30.392
ENSPLAG00000007773	si:dkey-34d22.5	71	32.716	ENSPLAG00000008845	dnajc27	58	32.716
ENSPLAG00000007773	si:dkey-34d22.5	77	38.824	ENSPLAG00000019570	rab6a	78	38.824
ENSPLAG00000007773	si:dkey-34d22.5	97	40.553	ENSPLAG00000004551	-	96	40.553
ENSPLAG00000007773	si:dkey-34d22.5	75	44.910	ENSPLAG00000019136	rab18b	80	44.910
ENSPLAG00000007773	si:dkey-34d22.5	71	36.943	ENSPLAG00000011697	rab23	75	35.849
ENSPLAG00000007773	si:dkey-34d22.5	85	38.298	ENSPLAG00000014563	rab4a	86	38.298
ENSPLAG00000007773	si:dkey-34d22.5	71	33.121	ENSPLAG00000001529	rheb	84	33.121
ENSPLAG00000007773	si:dkey-34d22.5	79	37.079	ENSPLAG00000003558	rab25a	85	37.079
ENSPLAG00000007773	si:dkey-34d22.5	75	43.713	ENSPLAG00000010104	rab18a	80	43.713
ENSPLAG00000007773	si:dkey-34d22.5	76	42.012	ENSPLAG00000005832	RAB13	88	42.012
ENSPLAG00000007773	si:dkey-34d22.5	75	36.145	ENSPLAG00000017838	rab5aa	75	36.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000007773	si:dkey-34d22.5	100	87.387	ENSACIG00000016958	si:dkey-34d22.5	100	87.387	Amphilophus_citrinellus
ENSPLAG00000007773	si:dkey-34d22.5	100	85.586	ENSATEG00000010784	si:dkey-34d22.5	86	85.586	Anabas_testudineus
ENSPLAG00000007773	si:dkey-34d22.5	89	63.452	ENSCPBG00000011236	-	90	63.452	Chrysemys_picta_bellii
ENSPLAG00000007773	si:dkey-34d22.5	100	74.324	ENSCSEG00000019183	si:dkey-34d22.5	100	74.324	Cynoglossus_semilaevis
ENSPLAG00000007773	si:dkey-34d22.5	100	91.892	ENSCVAG00000017064	si:dkey-34d22.5	100	91.892	Cyprinodon_variegatus
ENSPLAG00000007773	si:dkey-34d22.5	83	49.189	ENSDARG00000100379	si:dkey-34d22.2	99	49.189	Danio_rerio
ENSPLAG00000007773	si:dkey-34d22.5	97	57.407	ENSFALG00000001373	-	97	57.407	Ficedula_albicollis
ENSPLAG00000007773	si:dkey-34d22.5	100	92.825	ENSFHEG00000012041	si:dkey-34d22.5	100	92.825	Fundulus_heteroclitus
ENSPLAG00000007773	si:dkey-34d22.5	86	61.458	ENSGALG00000000994	-	90	61.458	Gallus_gallus
ENSPLAG00000007773	si:dkey-34d22.5	100	97.748	ENSGAFG00000008183	si:dkey-34d22.5	100	97.748	Gambusia_affinis
ENSPLAG00000007773	si:dkey-34d22.5	94	57.212	ENSGAGG00000004918	-	100	57.212	Gopherus_agassizii
ENSPLAG00000007773	si:dkey-34d22.5	99	73.756	ENSHCOG00000015692	si:dkey-34d22.5	99	73.756	Hippocampus_comes
ENSPLAG00000007773	si:dkey-34d22.5	100	87.387	ENSKMAG00000012778	si:dkey-34d22.5	100	87.387	Kryptolebias_marmoratus
ENSPLAG00000007773	si:dkey-34d22.5	99	81.900	ENSLBEG00000002926	si:dkey-34d22.5	100	81.900	Labrus_bergylta
ENSPLAG00000007773	si:dkey-34d22.5	98	58.716	ENSLACG00000012674	si:dkey-34d22.5	99	58.716	Latimeria_chalumnae
ENSPLAG00000007773	si:dkey-34d22.5	98	67.281	ENSLOCG00000003467	si:dkey-34d22.5	98	70.507	Lepisosteus_oculatus
ENSPLAG00000007773	si:dkey-34d22.5	100	80.180	ENSMMOG00000006846	si:dkey-34d22.5	100	80.180	Mola_mola
ENSPLAG00000007773	si:dkey-34d22.5	100	81.982	ENSMALG00000013152	si:dkey-34d22.5	100	81.982	Monopterus_albus
ENSPLAG00000007773	si:dkey-34d22.5	99	85.973	ENSORLG00000014099	si:dkey-34d22.5	99	85.973	Oryzias_latipes
ENSPLAG00000007773	si:dkey-34d22.5	99	85.520	ENSORLG00020020277	si:dkey-34d22.5	99	85.520	Oryzias_latipes_hni
ENSPLAG00000007773	si:dkey-34d22.5	99	85.520	ENSORLG00015000142	si:dkey-34d22.5	99	85.520	Oryzias_latipes_hsok
ENSPLAG00000007773	si:dkey-34d22.5	91	91.089	ENSOMEG00000017958	si:dkey-34d22.5	99	87.783	Oryzias_melastigma
ENSPLAG00000007773	si:dkey-34d22.5	97	73.148	ENSPKIG00000021209	si:dkey-34d22.5	99	73.148	Paramormyrops_kingsleyae
ENSPLAG00000007773	si:dkey-34d22.5	91	61.692	ENSPSIG00000006606	-	99	61.692	Pelodiscus_sinensis
ENSPLAG00000007773	si:dkey-34d22.5	99	82.805	ENSPMGG00000001298	-	99	82.805	Periophthalmus_magnuspinnatus
ENSPLAG00000007773	si:dkey-34d22.5	89	59.898	ENSPCIG00000022399	-	88	59.898	Phascolarctos_cinereus
ENSPLAG00000007773	si:dkey-34d22.5	100	100.000	ENSPFOG00000014499	si:dkey-34d22.5	100	100.000	Poecilia_formosa
ENSPLAG00000007773	si:dkey-34d22.5	100	100.000	ENSPMEG00000012932	si:dkey-34d22.5	100	100.000	Poecilia_mexicana
ENSPLAG00000007773	si:dkey-34d22.5	89	59.391	ENSSHAG00000008520	-	88	59.391	Sarcophilus_harrisii
ENSPLAG00000007773	si:dkey-34d22.5	97	68.837	ENSSFOG00015012088	rab42	96	68.837	Scleropages_formosus
ENSPLAG00000007773	si:dkey-34d22.5	100	87.838	ENSSLDG00000002646	si:dkey-34d22.5	100	87.838	Seriola_lalandi_dorsalis
ENSPLAG00000007773	si:dkey-34d22.5	99	87.783	ENSSPAG00000012955	si:dkey-34d22.5	99	87.783	Stegastes_partitus
ENSPLAG00000007773	si:dkey-34d22.5	93	48.544	ENSXETG00000020622	rab39a	98	48.544	Xenopus_tropicalis
ENSPLAG00000007773	si:dkey-34d22.5	100	96.847	ENSXCOG00000008410	si:dkey-34d22.5	100	96.847	Xiphophorus_couchianus
ENSPLAG00000007773	si:dkey-34d22.5	100	96.847	ENSXMAG00000029317	si:dkey-34d22.5	100	96.847	Xiphophorus_maculatus