EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000007856 (Gene tree)
Gene ID: 106957867
Gene Symbol: nom1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11687 bases
Position: chrKQ546259.1:301109-312795
Accession: 106957867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000022900	MA3	PF02847.17	5.6e-23	1	1
ENSPLAP00000022900	MIF4G	PF02854.19	3.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000007284	-	5661	XM_015049390	ENSPLAP00000022900	814 (aa)	XP_014904876	-

Gene Model

Click here to download ENSPLAG00000007856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000007856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000007856	nom1	97	54.710	ENSG00000146909	NOM1	60	68.654	Homo_sapiens
ENSPLAG00000007856	nom1	65	87.992	ENSAPOG00000012073	nom1	63	87.992	Acanthochromis_polyacanthus
ENSPLAG00000007856	nom1	80	58.781	ENSAMEG00000001412	NOM1	72	66.286	Ailuropoda_melanoleuca
ENSPLAG00000007856	nom1	64	87.214	ENSACIG00000018050	nom1	67	87.214	Amphilophus_citrinellus
ENSPLAG00000007856	nom1	99	72.652	ENSAOCG00000006229	nom1	63	86.867	Amphiprion_ocellaris
ENSPLAG00000007856	nom1	99	73.031	ENSAPEG00000015994	nom1	63	87.054	Amphiprion_percula
ENSPLAG00000007856	nom1	99	75.776	ENSATEG00000005405	nom1	65	85.902	Anabas_testudineus
ENSPLAG00000007856	nom1	78	60.000	ENSAPLG00000006585	NOM1	80	67.048	Anas_platyrhynchos
ENSPLAG00000007856	nom1	73	61.642	ENSACAG00000011192	NOM1	84	65.543	Anolis_carolinensis
ENSPLAG00000007856	nom1	98	73.998	ENSACLG00000000033	nom1	64	85.821	Astatotilapia_calliptera
ENSPLAG00000007856	nom1	98	52.096	ENSBTAG00000016435	NOM1	61	65.010	Bos_taurus
ENSPLAG00000007856	nom1	97	54.874	ENSCJAG00000004336	NOM1	60	67.692	Callithrix_jacchus
ENSPLAG00000007856	nom1	98	52.835	ENSCAFG00020005121	NOM1	60	66.219	Canis_lupus_dingo
ENSPLAG00000007856	nom1	81	57.536	ENSCHIG00000020102	NOM1	62	65.333	Capra_hircus
ENSPLAG00000007856	nom1	97	56.473	ENSTSYG00000000227	NOM1	62	67.816	Carlito_syrichta
ENSPLAG00000007856	nom1	63	68.593	ENSCAPG00000016273	NOM1	99	68.593	Cavia_aperea
ENSPLAG00000007856	nom1	99	52.701	ENSCPOG00000025538	NOM1	60	64.038	Cavia_porcellus
ENSPLAG00000007856	nom1	89	67.857	ENSCCAG00000014944	NOM1	99	67.045	Cebus_capucinus
ENSPLAG00000007856	nom1	84	58.287	ENSCLAG00000000267	NOM1	61	66.284	Chinchilla_lanigera
ENSPLAG00000007856	nom1	74	67.803	ENSCPBG00000018215	NOM1	82	67.803	Chrysemys_picta_bellii
ENSPLAG00000007856	nom1	86	36.512	ENSCING00000005248	-	70	40.840	Ciona_intestinalis
ENSPLAG00000007856	nom1	64	68.077	ENSCANG00000041984	NOM1	89	68.077	Colobus_angolensis_palliatus
ENSPLAG00000007856	nom1	80	59.618	ENSCGRG00001020293	Nom1	61	67.823	Cricetulus_griseus_chok1gshd
ENSPLAG00000007856	nom1	64	67.823	ENSCGRG00000005405	Nom1	97	67.823	Cricetulus_griseus_crigri
ENSPLAG00000007856	nom1	94	70.013	ENSCSEG00000000932	nom1	65	77.966	Cynoglossus_semilaevis
ENSPLAG00000007856	nom1	100	80.024	ENSCVAG00000007562	nom1	64	90.130	Cyprinodon_variegatus
ENSPLAG00000007856	nom1	99	60.471	ENSDARG00000060027	nom1	100	74.538	Danio_rerio
ENSPLAG00000007856	nom1	64	57.714	ENSDORG00000015682	Nom1	76	57.875	Dipodomys_ordii
ENSPLAG00000007856	nom1	77	36.850	FBgn0035336	CG9004	60	38.846	Drosophila_melanogaster
ENSPLAG00000007856	nom1	72	56.905	ENSETEG00000003104	NOM1	74	56.905	Echinops_telfairi
ENSPLAG00000007856	nom1	53	48.853	ENSEBUG00000010077	nom1	96	48.853	Eptatretus_burgeri
ENSPLAG00000007856	nom1	80	62.312	ENSEASG00005001489	NOM1	61	69.157	Equus_asinus_asinus
ENSPLAG00000007856	nom1	67	67.216	ENSECAG00000007596	NOM1	56	68.966	Equus_caballus
ENSPLAG00000007856	nom1	68	77.132	ENSELUG00000006266	nom1	68	75.478	Esox_lucius
ENSPLAG00000007856	nom1	80	59.823	ENSFCAG00000006467	NOM1	63	66.603	Felis_catus
ENSPLAG00000007856	nom1	80	60.324	ENSFALG00000006904	NOM1	76	67.803	Ficedula_albicollis
ENSPLAG00000007856	nom1	98	52.347	ENSFDAG00000016241	NOM1	63	66.346	Fukomys_damarensis
ENSPLAG00000007856	nom1	99	78.909	ENSFHEG00000015974	nom1	68	86.477	Fundulus_heteroclitus
ENSPLAG00000007856	nom1	94	59.577	ENSGMOG00000005129	nom1	69	72.744	Gadus_morhua
ENSPLAG00000007856	nom1	100	91.597	ENSGAFG00000003211	nom1	67	94.840	Gambusia_affinis
ENSPLAG00000007856	nom1	82	59.795	ENSGAGG00000014347	NOM1	64	67.045	Gopherus_agassizii
ENSPLAG00000007856	nom1	67	66.300	ENSGGOG00000010920	NOM1	56	68.462	Gorilla_gorilla
ENSPLAG00000007856	nom1	98	73.544	ENSHBUG00000014616	nom1	64	85.634	Haplochromis_burtoni
ENSPLAG00000007856	nom1	98	54.048	ENSHGLG00000007392	NOM1	60	68.077	Heterocephalus_glaber_female
ENSPLAG00000007856	nom1	86	68.590	ENSHGLG00100014407	NOM1	60	68.077	Heterocephalus_glaber_male
ENSPLAG00000007856	nom1	65	71.456	ENSIPUG00000013980	nom1	64	70.709	Ictalurus_punctatus
ENSPLAG00000007856	nom1	72	63.283	ENSSTOG00000031736	NOM1	91	68.269	Ictidomys_tridecemlineatus
ENSPLAG00000007856	nom1	60	68.660	ENSJJAG00000011716	Nom1	98	68.660	Jaculus_jaculus
ENSPLAG00000007856	nom1	66	82.900	ENSLBEG00000009252	nom1	63	82.900	Labrus_bergylta
ENSPLAG00000007856	nom1	83	61.439	ENSLACG00000011777	NOM1	64	68.480	Latimeria_chalumnae
ENSPLAG00000007856	nom1	98	62.607	ENSLOCG00000012452	nom1	65	75.810	Lepisosteus_oculatus
ENSPLAG00000007856	nom1	98	49.267	ENSLAFG00000007119	NOM1	65	60.674	Loxodonta_africana
ENSPLAG00000007856	nom1	97	51.566	ENSMMUG00000039033	NOM1	59	63.985	Macaca_mulatta
ENSPLAG00000007856	nom1	64	68.077	ENSMLEG00000037062	NOM1	98	68.077	Mandrillus_leucophaeus
ENSPLAG00000007856	nom1	99	70.560	ENSMAMG00000004118	nom1	67	79.537	Mastacembelus_armatus
ENSPLAG00000007856	nom1	98	73.876	ENSMZEG00005000384	nom1	64	85.634	Maylandia_zebra
ENSPLAG00000007856	nom1	82	58.746	ENSMGAG00000005051	NOM1	76	66.095	Meleagris_gallopavo
ENSPLAG00000007856	nom1	97	54.890	ENSMAUG00000017988	Nom1	62	67.823	Mesocricetus_auratus
ENSPLAG00000007856	nom1	97	54.468	ENSMICG00000017531	NOM1	62	66.538	Microcebus_murinus
ENSPLAG00000007856	nom1	99	54.348	ENSMOCG00000015962	Nom1	61	67.500	Microtus_ochrogaster
ENSPLAG00000007856	nom1	99	66.786	ENSMMOG00000004419	nom1	65	76.182	Mola_mola
ENSPLAG00000007856	nom1	81	61.014	ENSMODG00000005177	NOM1	61	70.115	Monodelphis_domestica
ENSPLAG00000007856	nom1	93	72.129	ENSMALG00000008800	nom1	61	83.918	Monopterus_albus
ENSPLAG00000007856	nom1	97	53.799	MGP_CAROLIEiJ_G0027043	Nom1	61	66.281	Mus_caroli
ENSPLAG00000007856	nom1	97	54.268	ENSMUSG00000001569	Nom1	61	66.667	Mus_musculus
ENSPLAG00000007856	nom1	97	53.837	MGP_SPRETEiJ_G0028039	Nom1	61	66.667	Mus_spretus
ENSPLAG00000007856	nom1	80	56.176	ENSMPUG00000009745	NOM1	75	64.107	Mustela_putorius_furo
ENSPLAG00000007856	nom1	73	62.458	ENSMLUG00000009129	NOM1	87	67.366	Myotis_lucifugus
ENSPLAG00000007856	nom1	99	73.325	ENSNBRG00000016429	nom1	95	85.660	Neolamprologus_brichardi
ENSPLAG00000007856	nom1	97	53.614	ENSNLEG00000000238	NOM1	60	66.475	Nomascus_leucogenys
ENSPLAG00000007856	nom1	55	69.517	ENSMEUG00000001108	NOM1	51	74.899	Notamacropus_eugenii
ENSPLAG00000007856	nom1	53	57.333	ENSOPRG00000014676	NOM1	52	56.592	Ochotona_princeps
ENSPLAG00000007856	nom1	80	59.050	ENSODEG00000009399	NOM1	75	64.962	Octodon_degus
ENSPLAG00000007856	nom1	57	67.603	ENSOANG00000006139	-	97	67.603	Ornithorhynchus_anatinus
ENSPLAG00000007856	nom1	98	54.964	ENSOCUG00000004071	-	61	68.846	Oryctolagus_cuniculus
ENSPLAG00000007856	nom1	94	46.778	ENSOCUG00000021448	-	71	54.876	Oryctolagus_cuniculus
ENSPLAG00000007856	nom1	100	69.524	ENSORLG00000010541	nom1	65	81.903	Oryzias_latipes
ENSPLAG00000007856	nom1	93	70.807	ENSORLG00020010789	nom1	70	81.903	Oryzias_latipes_hni
ENSPLAG00000007856	nom1	100	69.359	ENSORLG00015010475	nom1	70	81.716	Oryzias_latipes_hsok
ENSPLAG00000007856	nom1	100	70.095	ENSOMEG00000004219	nom1	64	83.302	Oryzias_melastigma
ENSPLAG00000007856	nom1	64	68.834	ENSOGAG00000001124	NOM1	85	68.834	Otolemur_garnettii
ENSPLAG00000007856	nom1	81	57.246	ENSOARG00000007261	NOM1	70	65.010	Ovis_aries
ENSPLAG00000007856	nom1	80	60.965	ENSPPAG00000041374	NOM1	60	68.269	Pan_paniscus
ENSPLAG00000007856	nom1	80	59.471	ENSPTIG00000013532	NOM1	71	66.538	Panthera_tigris_altaica
ENSPLAG00000007856	nom1	80	61.029	ENSPTRG00000019917	NOM1	60	68.269	Pan_troglodytes
ENSPLAG00000007856	nom1	97	54.753	ENSPANG00000007605	NOM1	60	68.665	Papio_anubis
ENSPLAG00000007856	nom1	100	59.048	ENSPKIG00000005825	nom1	65	69.590	Paramormyrops_kingsleyae
ENSPLAG00000007856	nom1	64	67.992	ENSPSIG00000017848	NOM1	88	67.992	Pelodiscus_sinensis
ENSPLAG00000007856	nom1	99	71.235	ENSPMGG00000002577	nom1	99	70.049	Periophthalmus_magnuspinnatus
ENSPLAG00000007856	nom1	97	54.380	ENSPEMG00000024180	Nom1	60	68.401	Peromyscus_maniculatus_bairdii
ENSPLAG00000007856	nom1	100	95.600	ENSPFOG00000015771	nom1	100	95.600	Poecilia_formosa
ENSPLAG00000007856	nom1	100	98.157	ENSPMEG00000014155	nom1	100	98.157	Poecilia_mexicana
ENSPLAG00000007856	nom1	100	91.947	ENSPREG00000008850	nom1	68	98.043	Poecilia_reticulata
ENSPLAG00000007856	nom1	97	51.335	ENSPPYG00000018222	NOM1	59	62.115	Pongo_abelii
ENSPLAG00000007856	nom1	76	62.326	ENSPCAG00000000440	NOM1	78	62.326	Procavia_capensis
ENSPLAG00000007856	nom1	64	66.731	ENSPCOG00000015222	NOM1	98	66.731	Propithecus_coquereli
ENSPLAG00000007856	nom1	98	53.715	ENSPVAG00000014760	NOM1	61	65.583	Pteropus_vampyrus
ENSPLAG00000007856	nom1	98	73.633	ENSPNYG00000006975	nom1	97	84.673	Pundamilia_nyererei
ENSPLAG00000007856	nom1	68	71.506	ENSPNAG00000011085	nom1	87	72.812	Pygocentrus_nattereri
ENSPLAG00000007856	nom1	97	51.770	ENSRNOG00000048969	AABR07059041.1	64	63.148	Rattus_norvegicus
ENSPLAG00000007856	nom1	97	54.458	ENSRBIG00000037042	NOM1	60	68.077	Rhinopithecus_bieti
ENSPLAG00000007856	nom1	97	54.337	ENSRROG00000037293	NOM1	60	67.885	Rhinopithecus_roxellana
ENSPLAG00000007856	nom1	60	55.510	ENSSHAG00000002835	-	99	62.228	Sarcophilus_harrisii
ENSPLAG00000007856	nom1	67	67.642	ENSSHAG00000017998	-	77	69.275	Sarcophilus_harrisii
ENSPLAG00000007856	nom1	60	72.016	ENSSFOG00015003196	nom1	100	72.016	Scleropages_formosus
ENSPLAG00000007856	nom1	99	71.059	ENSSMAG00000011047	nom1	63	84.774	Scophthalmus_maximus
ENSPLAG00000007856	nom1	99	72.189	ENSSDUG00000006834	nom1	63	85.794	Seriola_dumerili
ENSPLAG00000007856	nom1	99	71.938	ENSSLDG00000021812	nom1	64	85.607	Seriola_lalandi_dorsalis
ENSPLAG00000007856	nom1	86	47.467	ENSSPUG00000002556	NOM1	100	70.000	Sphenodon_punctatus
ENSPLAG00000007856	nom1	99	74.971	ENSSPAG00000000953	nom1	85	87.992	Stegastes_partitus
ENSPLAG00000007856	nom1	85	56.828	ENSTGUG00000000702	-	75	67.045	Taeniopygia_guttata
ENSPLAG00000007856	nom1	99	68.932	ENSTRUG00000010239	nom1	64	79.813	Takifugu_rubripes
ENSPLAG00000007856	nom1	98	69.154	ENSTNIG00000012783	nom1	70	78.532	Tetraodon_nigroviridis
ENSPLAG00000007856	nom1	80	61.252	ENSTTRG00000009691	NOM1	61	67.767	Tursiops_truncatus
ENSPLAG00000007856	nom1	85	56.865	ENSUAMG00000025450	NOM1	60	66.157	Ursus_americanus
ENSPLAG00000007856	nom1	85	57.507	ENSUMAG00000014275	NOM1	75	66.157	Ursus_maritimus
ENSPLAG00000007856	nom1	80	58.382	ENSVVUG00000002608	NOM1	57	70.040	Vulpes_vulpes
ENSPLAG00000007856	nom1	99	49.533	ENSXETG00000021611	nom1	82	73.659	Xenopus_tropicalis
ENSPLAG00000007856	nom1	100	91.127	ENSXMAG00000002451	nom1	67	94.840	Xiphophorus_maculatus