EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000008077 (Gene tree)
Gene ID: 106963025
Gene Symbol: lrrc47
Alias: -
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 5462 bases
Position: chrKQ546800.1:55070-60531
Accession: 106963025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023047	B3_4	PF03483.17	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006932	-	2870	XM_015057742	ENSPLAP00000023047	554 (aa)	XP_014913228	UPI00072DB382

Gene Model

Click here to download ENSPLAG00000008077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008077	lrrc47	99	55.556	ENSG00000130764	LRRC47	99	55.556	Homo_sapiens
ENSPLAG00000008077	lrrc47	100	81.038	ENSAPOG00000019553	lrrc47	100	81.038	Acanthochromis_polyacanthus
ENSPLAG00000008077	lrrc47	76	57.737	ENSAMEG00000009152	LRRC47	94	57.737	Ailuropoda_melanoleuca
ENSPLAG00000008077	lrrc47	67	63.228	ENSAPLG00000003167	LRRC47	99	63.228	Anas_platyrhynchos
ENSPLAG00000008077	lrrc47	66	61.930	ENSACAG00000008267	LRRC47	100	61.930	Anolis_carolinensis
ENSPLAG00000008077	lrrc47	99	54.861	ENSANAG00000025576	LRRC47	99	54.435	Aotus_nancymaae
ENSPLAG00000008077	lrrc47	99	55.245	ENSBTAG00000004738	LRRC47	98	55.245	Bos_taurus
ENSPLAG00000008077	lrrc47	99	54.530	ENSCAFG00000019492	LRRC47	97	54.704	Canis_familiaris
ENSPLAG00000008077	lrrc47	99	54.720	ENSCAFG00020009667	LRRC47	99	54.895	Canis_lupus_dingo
ENSPLAG00000008077	lrrc47	99	55.944	ENSCHIG00000022607	LRRC47	99	55.826	Capra_hircus
ENSPLAG00000008077	lrrc47	95	55.755	ENSTSYG00000009326	LRRC47	97	55.810	Carlito_syrichta
ENSPLAG00000008077	lrrc47	65	59.893	ENSCAPG00000016517	LRRC47	99	59.733	Cavia_aperea
ENSPLAG00000008077	lrrc47	99	54.450	ENSCPOG00000014931	LRRC47	95	54.450	Cavia_porcellus
ENSPLAG00000008077	lrrc47	99	54.514	ENSCCAG00000024895	LRRC47	99	54.514	Cebus_capucinus
ENSPLAG00000008077	lrrc47	99	55.729	ENSCATG00000029337	LRRC47	99	55.729	Cercocebus_atys
ENSPLAG00000008077	lrrc47	99	54.912	ENSCLAG00000006093	LRRC47	99	54.912	Chinchilla_lanigera
ENSPLAG00000008077	lrrc47	99	55.903	ENSCSAG00000000727	LRRC47	99	55.903	Chlorocebus_sabaeus
ENSPLAG00000008077	lrrc47	99	51.661	ENSCPBG00000019404	LRRC47	99	51.661	Chrysemys_picta_bellii
ENSPLAG00000008077	lrrc47	79	56.645	ENSCANG00000030701	LRRC47	96	56.645	Colobus_angolensis_palliatus
ENSPLAG00000008077	lrrc47	99	54.816	ENSCGRG00001015159	Lrrc47	89	54.816	Cricetulus_griseus_chok1gshd
ENSPLAG00000008077	lrrc47	67	59.896	ENSCGRG00000017336	Lrrc47	99	60.590	Cricetulus_griseus_crigri
ENSPLAG00000008077	lrrc47	100	74.552	ENSCSEG00000006217	lrrc47	96	74.061	Cynoglossus_semilaevis
ENSPLAG00000008077	lrrc47	66	60.106	ENSDORG00000016594	Lrrc47	99	60.372	Dipodomys_ordii
ENSPLAG00000008077	lrrc47	99	56.174	ENSEASG00005021788	LRRC47	99	56.174	Equus_asinus_asinus
ENSPLAG00000008077	lrrc47	99	56.348	ENSECAG00000022472	LRRC47	89	56.348	Equus_caballus
ENSPLAG00000008077	lrrc47	99	67.318	ENSELUG00000017544	lrrc47	97	67.851	Esox_lucius
ENSPLAG00000008077	lrrc47	94	53.676	ENSFCAG00000011632	LRRC47	96	53.578	Felis_catus
ENSPLAG00000008077	lrrc47	70	62.982	ENSFALG00000009631	LRRC47	98	58.581	Ficedula_albicollis
ENSPLAG00000008077	lrrc47	100	65.364	ENSGMOG00000015674	lrrc47	99	65.364	Gadus_morhua
ENSPLAG00000008077	lrrc47	99	52.212	ENSGALG00000050995	LRRC47	99	52.389	Gallus_gallus
ENSPLAG00000008077	lrrc47	100	74.240	ENSGACG00000005550	lrrc47	99	74.419	Gasterosteus_aculeatus
ENSPLAG00000008077	lrrc47	99	51.515	ENSGAGG00000022584	LRRC47	99	52.694	Gopherus_agassizii
ENSPLAG00000008077	lrrc47	99	55.729	ENSGGOG00000015571	LRRC47	99	55.729	Gorilla_gorilla
ENSPLAG00000008077	lrrc47	99	53.403	ENSHGLG00000018278	LRRC47	95	53.403	Heterocephalus_glaber_female
ENSPLAG00000008077	lrrc47	70	58.105	ENSHGLG00100008507	LRRC47	99	58.105	Heterocephalus_glaber_male
ENSPLAG00000008077	lrrc47	100	74.955	ENSHCOG00000006348	lrrc47	98	75.135	Hippocampus_comes
ENSPLAG00000008077	lrrc47	99	55.614	ENSSTOG00000027559	LRRC47	99	55.614	Ictidomys_tridecemlineatus
ENSPLAG00000008077	lrrc47	99	56.370	ENSJJAG00000017474	Lrrc47	96	56.370	Jaculus_jaculus
ENSPLAG00000008077	lrrc47	100	80.501	ENSKMAG00000003414	lrrc47	100	80.501	Kryptolebias_marmoratus
ENSPLAG00000008077	lrrc47	99	56.316	ENSLAFG00000011657	LRRC47	98	56.870	Loxodonta_africana
ENSPLAG00000008077	lrrc47	99	43.576	ENSMFAG00000045730	LRRC47	88	56.118	Macaca_fascicularis
ENSPLAG00000008077	lrrc47	99	55.345	ENSMNEG00000042488	LRRC47	98	55.903	Macaca_nemestrina
ENSPLAG00000008077	lrrc47	77	56.920	ENSMLEG00000043735	LRRC47	90	56.920	Mandrillus_leucophaeus
ENSPLAG00000008077	lrrc47	99	55.360	ENSMAUG00000021337	Lrrc47	97	55.360	Mesocricetus_auratus
ENSPLAG00000008077	lrrc47	99	55.575	ENSMICG00000026816	LRRC47	99	56.153	Microcebus_murinus
ENSPLAG00000008077	lrrc47	99	55.496	ENSMOCG00000021279	Lrrc47	99	55.752	Microtus_ochrogaster
ENSPLAG00000008077	lrrc47	100	77.996	ENSMMOG00000017007	lrrc47	100	77.996	Mola_mola
ENSPLAG00000008077	lrrc47	99	45.167	ENSMODG00000006554	LRRC47	98	53.684	Monodelphis_domestica
ENSPLAG00000008077	lrrc47	99	55.130	MGP_CAROLIEiJ_G0026864	Lrrc47	99	55.035	Mus_caroli
ENSPLAG00000008077	lrrc47	99	55.130	ENSMUSG00000029028	Lrrc47	99	55.035	Mus_musculus
ENSPLAG00000008077	lrrc47	99	54.991	MGP_PahariEiJ_G0029212	Lrrc47	99	55.113	Mus_pahari
ENSPLAG00000008077	lrrc47	99	54.957	MGP_SPRETEiJ_G0027857	Lrrc47	99	54.861	Mus_spretus
ENSPLAG00000008077	lrrc47	66	59.947	ENSMPUG00000007321	LRRC47	75	60.212	Mustela_putorius_furo
ENSPLAG00000008077	lrrc47	99	55.908	ENSNGAG00000022153	Lrrc47	98	56.392	Nannospalax_galili
ENSPLAG00000008077	lrrc47	99	54.704	ENSNLEG00000008131	LRRC47	99	54.974	Nomascus_leucogenys
ENSPLAG00000008077	lrrc47	84	54.733	ENSODEG00000010882	LRRC47	93	55.350	Octodon_degus
ENSPLAG00000008077	lrrc47	97	76.296	ENSORLG00000002532	lrrc47	100	78.148	Oryzias_latipes
ENSPLAG00000008077	lrrc47	100	76.923	ENSORLG00020019601	lrrc47	100	78.712	Oryzias_latipes_hni
ENSPLAG00000008077	lrrc47	100	76.208	ENSORLG00015014040	lrrc47	100	77.996	Oryzias_latipes_hsok
ENSPLAG00000008077	lrrc47	100	78.891	ENSOMEG00000008989	lrrc47	100	79.428	Oryzias_melastigma
ENSPLAG00000008077	lrrc47	99	55.304	ENSOGAG00000001553	LRRC47	99	55.304	Otolemur_garnettii
ENSPLAG00000008077	lrrc47	99	53.846	ENSOARG00000015290	LRRC47	98	54.021	Ovis_aries
ENSPLAG00000008077	lrrc47	74	59.346	ENSPPAG00000036370	-	98	59.346	Pan_paniscus
ENSPLAG00000008077	lrrc47	99	54.181	ENSPPRG00000005261	LRRC47	98	54.355	Panthera_pardus
ENSPLAG00000008077	lrrc47	99	55.556	ENSPTRG00000000068	LRRC47	99	55.556	Pan_troglodytes
ENSPLAG00000008077	lrrc47	99	55.903	ENSPANG00000012437	LRRC47	99	55.903	Papio_anubis
ENSPLAG00000008077	lrrc47	66	63.660	ENSPSIG00000004196	LRRC47	99	63.395	Pelodiscus_sinensis
ENSPLAG00000008077	lrrc47	65	61.559	ENSPEMG00000021068	Lrrc47	99	62.032	Peromyscus_maniculatus_bairdii
ENSPLAG00000008077	lrrc47	99	55.888	ENSPCIG00000003638	LRRC47	98	56.567	Phascolarctos_cinereus
ENSPLAG00000008077	lrrc47	94	99.618	ENSPFOG00000000992	lrrc47	94	99.618	Poecilia_formosa
ENSPLAG00000008077	lrrc47	100	99.281	ENSPMEG00000007367	lrrc47	100	99.281	Poecilia_mexicana
ENSPLAG00000008077	lrrc47	99	55.556	ENSPPYG00000001960	LRRC47	99	55.556	Pongo_abelii
ENSPLAG00000008077	lrrc47	99	55.729	ENSPCOG00000019161	LRRC47	98	55.923	Propithecus_coquereli
ENSPLAG00000008077	lrrc47	99	55.692	ENSPVAG00000009839	LRRC47	98	55.692	Pteropus_vampyrus
ENSPLAG00000008077	lrrc47	99	64.821	ENSPNAG00000017982	lrrc47	98	65.884	Pygocentrus_nattereri
ENSPLAG00000008077	lrrc47	99	54.609	ENSRNOG00000024796	Lrrc47	99	54.609	Rattus_norvegicus
ENSPLAG00000008077	lrrc47	99	55.903	ENSRBIG00000019437	LRRC47	99	55.903	Rhinopithecus_bieti
ENSPLAG00000008077	lrrc47	99	55.903	ENSRROG00000043182	LRRC47	99	55.903	Rhinopithecus_roxellana
ENSPLAG00000008077	lrrc47	79	57.616	ENSSBOG00000026334	LRRC47	92	57.616	Saimiri_boliviensis_boliviensis
ENSPLAG00000008077	lrrc47	99	49.739	ENSSHAG00000007360	LRRC47	98	50.433	Sarcophilus_harrisii
ENSPLAG00000008077	lrrc47	100	77.321	ENSSMAG00000009344	lrrc47	100	77.321	Scophthalmus_maximus
ENSPLAG00000008077	lrrc47	100	80.322	ENSSDUG00000014618	lrrc47	100	81.216	Seriola_dumerili
ENSPLAG00000008077	lrrc47	100	79.964	ENSSLDG00000018908	lrrc47	100	80.859	Seriola_lalandi_dorsalis
ENSPLAG00000008077	lrrc47	99	52.324	ENSSPUG00000010277	LRRC47	98	53.184	Sphenodon_punctatus
ENSPLAG00000008077	lrrc47	100	80.143	ENSSPAG00000005188	lrrc47	100	81.574	Stegastes_partitus
ENSPLAG00000008077	lrrc47	99	55.575	ENSSSCG00000039516	LRRC47	98	55.749	Sus_scrofa
ENSPLAG00000008077	lrrc47	72	61.558	ENSTGUG00000002737	LRRC47	99	61.558	Taeniopygia_guttata
ENSPLAG00000008077	lrrc47	100	76.354	ENSTRUG00000017696	lrrc47	100	76.354	Takifugu_rubripes
ENSPLAG00000008077	lrrc47	100	76.715	ENSTNIG00000010923	lrrc47	99	76.715	Tetraodon_nigroviridis
ENSPLAG00000008077	lrrc47	99	54.609	ENSTTRG00000011751	LRRC47	99	54.783	Tursiops_truncatus
ENSPLAG00000008077	lrrc47	89	55.212	ENSUAMG00000012080	LRRC47	98	55.405	Ursus_americanus
ENSPLAG00000008077	lrrc47	66	59.737	ENSUMAG00000010781	LRRC47	81	60.000	Ursus_maritimus
ENSPLAG00000008077	lrrc47	99	51.115	ENSVVUG00000027118	LRRC47	93	52.364	Vulpes_vulpes
ENSPLAG00000008077	lrrc47	99	60.071	ENSXETG00000006029	lrrc47	98	60.071	Xenopus_tropicalis
ENSPLAG00000008077	lrrc47	99	95.652	ENSXCOG00000002813	lrrc47	99	95.290	Xiphophorus_couchianus
ENSPLAG00000008077	lrrc47	99	96.733	ENSXMAG00000019386	lrrc47	100	96.737	Xiphophorus_maculatus