EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000008311 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase III subunit RPC1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7288 bases
Position: chrKQ548757.1:2762-10049
Accession: 106941135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023156	RNA_pol_Rpb1_2	PF00623.20	1.4e-73	1	1
ENSPLAP00000023156	RNA_pol_Rpb1_3	PF04983.18	1.8e-21	1	1
ENSPLAP00000023156	RNA_pol_Rpb1_1	PF04997.12	6.9e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006642	-	1986	XM_015024078	ENSPLAP00000023156	661 (aa)	XP_014879564	-

Gene Model

Click here to download ENSPLAG00000008311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008311	-	96	88.994	ENSG00000148606	POLR3A	95	87.895	Homo_sapiens
ENSPLAG00000008311	-	96	94.969	ENSAPOG00000022727	polr3a	73	94.969	Acanthochromis_polyacanthus
ENSPLAG00000008311	-	94	62.540	ENSCHOG00000008368	POLR3A	52	62.540	Choloepus_hoffmanni
ENSPLAG00000008311	-	96	88.836	ENSCGRG00001015599	-	54	88.836	Cricetulus_griseus_chok1gshd
ENSPLAG00000008311	-	96	88.836	ENSCGRG00000001019	Polr3a	55	88.836	Cricetulus_griseus_crigri
ENSPLAG00000008311	-	81	72.105	ENSEBUG00000013761	polr3a	66	72.105	Eptatretus_burgeri
ENSPLAG00000008311	-	97	86.541	ENSIPUG00000001706	polr3a	97	86.541	Ictalurus_punctatus
ENSPLAG00000008311	-	96	79.717	ENSJJAG00000016217	-	98	79.560	Jaculus_jaculus
ENSPLAG00000008311	-	93	88.455	ENSMNEG00000035163	POLR3A	54	88.455	Macaca_nemestrina
ENSPLAG00000008311	-	96	88.836	ENSMUSG00000025280	Polr3a	98	88.836	Mus_musculus
ENSPLAG00000008311	-	97	87.931	ENSPPAG00000041726	-	99	87.931	Pan_paniscus
ENSPLAG00000008311	-	93	84.790	ENSPMGG00000010601	polr3a	98	84.790	Periophthalmus_magnuspinnatus
ENSPLAG00000008311	-	97	100.000	ENSPFOG00000022090	POLR3A	100	100.000	Poecilia_formosa
ENSPLAG00000008311	-	96	100.000	ENSPFOG00000021951	polr3a	100	100.000	Poecilia_formosa
ENSPLAG00000008311	-	72	100.000	ENSPMEG00000021564	-	99	100.000	Poecilia_mexicana
ENSPLAG00000008311	-	96	93.396	ENSTRUG00000013488	polr3a	98	92.453	Takifugu_rubripes
ENSPLAG00000008311	-	99	85.163	ENSTTRG00000007817	POLR3A	51	85.163	Tursiops_truncatus
ENSPLAG00000008311	-	96	89.151	ENSUAMG00000011283	POLR3A	94	88.333	Ursus_americanus
ENSPLAG00000008311	-	96	89.134	ENSXETG00000018101	polr3a	53	89.134	Xenopus_tropicalis
ENSPLAG00000008311	-	98	99.385	ENSXCOG00000006098	polr3a	99	99.385	Xiphophorus_couchianus