EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000008414 (Gene tree)
Gene ID: 106956516
Gene Symbol: trmu
Alias: -
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 4715 bases
Position: chrKQ546140.1:114851-119565
Accession: 106956516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000006301	tRNA_Me_trans	PF03054.16	2.2e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006490	-	2891	XM_015047404	ENSPLAP00000006301	416 (aa)	XP_014902890	UPI0004443B71

Gene Model

Click here to download ENSPLAG00000008414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008414	trmu	99	70.602	ENSG00000100416	TRMU	96	76.101	Homo_sapiens
ENSPLAG00000008414	trmu	99	88.193	ENSAPOG00000014458	trmu	99	88.193	Acanthochromis_polyacanthus
ENSPLAG00000008414	trmu	98	72.414	ENSAMEG00000003319	TRMU	97	72.414	Ailuropoda_melanoleuca
ENSPLAG00000008414	trmu	99	86.232	ENSACIG00000002101	trmu	99	86.232	Amphilophus_citrinellus
ENSPLAG00000008414	trmu	99	88.434	ENSAOCG00000013155	trmu	99	88.434	Amphiprion_ocellaris
ENSPLAG00000008414	trmu	99	88.193	ENSAPEG00000013350	trmu	99	88.193	Amphiprion_percula
ENSPLAG00000008414	trmu	99	85.610	ENSATEG00000007814	trmu	99	85.610	Anabas_testudineus
ENSPLAG00000008414	trmu	91	73.947	ENSAPLG00000016380	TRMU	97	73.947	Anas_platyrhynchos
ENSPLAG00000008414	trmu	95	72.911	ENSACAG00000007720	TRMU	95	72.911	Anolis_carolinensis
ENSPLAG00000008414	trmu	99	70.803	ENSANAG00000038053	TRMU	97	70.803	Aotus_nancymaae
ENSPLAG00000008414	trmu	99	87.440	ENSACLG00000005395	trmu	99	87.440	Astatotilapia_calliptera
ENSPLAG00000008414	trmu	99	78.049	ENSAMXG00000005282	trmu	99	78.049	Astyanax_mexicanus
ENSPLAG00000008414	trmu	99	71.290	ENSBTAG00000005595	TRMU	99	71.290	Bos_taurus
ENSPLAG00000008414	trmu	91	40.464	WBGene00007114	mttu-1	98	40.464	Caenorhabditis_elegans
ENSPLAG00000008414	trmu	99	68.916	ENSCJAG00000000198	TRMU	99	68.916	Callithrix_jacchus
ENSPLAG00000008414	trmu	99	72.263	ENSCAFG00000000779	TRMU	98	71.807	Canis_familiaris
ENSPLAG00000008414	trmu	99	72.263	ENSCAFG00020009184	TRMU	98	71.807	Canis_lupus_dingo
ENSPLAG00000008414	trmu	99	71.046	ENSCHIG00000017074	TRMU	99	70.602	Capra_hircus
ENSPLAG00000008414	trmu	96	73.183	ENSTSYG00000003853	TRMU	95	73.183	Carlito_syrichta
ENSPLAG00000008414	trmu	96	66.826	ENSCAPG00000013034	TRMU	98	66.826	Cavia_aperea
ENSPLAG00000008414	trmu	99	70.602	ENSCPOG00000020780	TRMU	99	70.602	Cavia_porcellus
ENSPLAG00000008414	trmu	99	69.398	ENSCCAG00000021641	TRMU	99	69.398	Cebus_capucinus
ENSPLAG00000008414	trmu	96	71.930	ENSCATG00000032800	TRMU	95	71.930	Cercocebus_atys
ENSPLAG00000008414	trmu	100	70.192	ENSCLAG00000017269	TRMU	99	70.192	Chinchilla_lanigera
ENSPLAG00000008414	trmu	99	70.361	ENSCSAG00000005279	TRMU	99	70.361	Chlorocebus_sabaeus
ENSPLAG00000008414	trmu	92	72.135	ENSCPBG00000011621	TRMU	96	72.135	Chrysemys_picta_bellii
ENSPLAG00000008414	trmu	94	46.954	ENSCING00000019371	-	96	46.954	Ciona_intestinalis
ENSPLAG00000008414	trmu	96	71.178	ENSCANG00000041645	TRMU	95	71.178	Colobus_angolensis_palliatus
ENSPLAG00000008414	trmu	99	70.316	ENSCGRG00001001739	Trmu	98	70.316	Cricetulus_griseus_chok1gshd
ENSPLAG00000008414	trmu	99	65.207	ENSCGRG00000002781	Trmu	98	65.207	Cricetulus_griseus_crigri
ENSPLAG00000008414	trmu	100	79.567	ENSCSEG00000012382	trmu	100	79.567	Cynoglossus_semilaevis
ENSPLAG00000008414	trmu	99	91.546	ENSCVAG00000001366	trmu	99	91.546	Cyprinodon_variegatus
ENSPLAG00000008414	trmu	99	74.396	ENSDARG00000043734	trmu	99	74.396	Danio_rerio
ENSPLAG00000008414	trmu	62	58.687	ENSDNOG00000047245	-	95	57.353	Dasypus_novemcinctus
ENSPLAG00000008414	trmu	96	72.682	ENSDORG00000007455	Trmu	97	72.682	Dipodomys_ordii
ENSPLAG00000008414	trmu	93	43.523	FBgn0040337	CG3021	95	43.523	Drosophila_melanogaster
ENSPLAG00000008414	trmu	94	56.743	ENSEBUG00000007454	trmu	100	55.043	Eptatretus_burgeri
ENSPLAG00000008414	trmu	96	73.434	ENSEASG00005021725	TRMU	99	71.807	Equus_asinus_asinus
ENSPLAG00000008414	trmu	96	73.434	ENSECAG00000000467	TRMU	98	71.807	Equus_caballus
ENSPLAG00000008414	trmu	71	52.333	ENSEEUG00000000074	-	72	52.333	Erinaceus_europaeus
ENSPLAG00000008414	trmu	99	79.808	ENSELUG00000009464	trmu	99	81.793	Esox_lucius
ENSPLAG00000008414	trmu	96	73.434	ENSFCAG00000006533	TRMU	99	71.566	Felis_catus
ENSPLAG00000008414	trmu	92	71.684	ENSFALG00000010035	TRMU	99	71.684	Ficedula_albicollis
ENSPLAG00000008414	trmu	93	68.814	ENSFDAG00000017472	TRMU	99	68.814	Fukomys_damarensis
ENSPLAG00000008414	trmu	99	90.602	ENSFHEG00000003162	trmu	98	91.826	Fundulus_heteroclitus
ENSPLAG00000008414	trmu	97	71.253	ENSGMOG00000001323	trmu	100	71.253	Gadus_morhua
ENSPLAG00000008414	trmu	98	72.530	ENSGALG00000031922	TRMU	98	72.530	Gallus_gallus
ENSPLAG00000008414	trmu	98	95.844	ENSGAFG00000013331	trmu	98	95.844	Gambusia_affinis
ENSPLAG00000008414	trmu	99	82.464	ENSGACG00000019024	trmu	99	82.464	Gasterosteus_aculeatus
ENSPLAG00000008414	trmu	99	70.602	ENSGGOG00000000203	TRMU	99	70.602	Gorilla_gorilla
ENSPLAG00000008414	trmu	99	86.957	ENSHBUG00000023421	trmu	99	86.957	Haplochromis_burtoni
ENSPLAG00000008414	trmu	99	68.990	ENSHGLG00000009278	TRMU	99	68.990	Heterocephalus_glaber_female
ENSPLAG00000008414	trmu	99	68.990	ENSHGLG00100018863	TRMU	99	68.990	Heterocephalus_glaber_male
ENSPLAG00000008414	trmu	99	84.819	ENSHCOG00000013459	trmu	99	84.819	Hippocampus_comes
ENSPLAG00000008414	trmu	96	80.201	ENSIPUG00000009785	trmu	98	80.201	Ictalurus_punctatus
ENSPLAG00000008414	trmu	99	71.084	ENSSTOG00000010993	TRMU	99	71.084	Ictidomys_tridecemlineatus
ENSPLAG00000008414	trmu	97	70.968	ENSJJAG00000000667	Trmu	97	70.968	Jaculus_jaculus
ENSPLAG00000008414	trmu	99	85.024	ENSKMAG00000008516	trmu	99	85.024	Kryptolebias_marmoratus
ENSPLAG00000008414	trmu	99	83.816	ENSLBEG00000018831	trmu	99	83.816	Labrus_bergylta
ENSPLAG00000008414	trmu	98	73.188	ENSLACG00000013713	TRMU	99	73.188	Latimeria_chalumnae
ENSPLAG00000008414	trmu	99	78.125	ENSLOCG00000016066	trmu	99	78.125	Lepisosteus_oculatus
ENSPLAG00000008414	trmu	99	62.201	ENSLAFG00000005129	TRMU	99	62.201	Loxodonta_africana
ENSPLAG00000008414	trmu	99	70.602	ENSMFAG00000039767	TRMU	99	70.602	Macaca_fascicularis
ENSPLAG00000008414	trmu	99	70.602	ENSMMUG00000000807	TRMU	99	70.602	Macaca_mulatta
ENSPLAG00000008414	trmu	99	70.602	ENSMNEG00000028164	TRMU	99	70.602	Macaca_nemestrina
ENSPLAG00000008414	trmu	96	71.930	ENSMLEG00000033884	TRMU	95	71.930	Mandrillus_leucophaeus
ENSPLAG00000008414	trmu	99	83.575	ENSMAMG00000004717	trmu	99	83.575	Mastacembelus_armatus
ENSPLAG00000008414	trmu	99	87.440	ENSMZEG00005015797	trmu	99	87.440	Maylandia_zebra
ENSPLAG00000008414	trmu	79	71.006	ENSMGAG00000007550	TRMU	99	71.006	Meleagris_gallopavo
ENSPLAG00000008414	trmu	99	70.073	ENSMAUG00000022282	Trmu	99	70.073	Mesocricetus_auratus
ENSPLAG00000008414	trmu	96	72.431	ENSMICG00000029046	TRMU	97	72.431	Microcebus_murinus
ENSPLAG00000008414	trmu	96	70.927	ENSMOCG00000014641	Trmu	96	70.927	Microtus_ochrogaster
ENSPLAG00000008414	trmu	99	83.535	ENSMMOG00000007229	trmu	99	83.535	Mola_mola
ENSPLAG00000008414	trmu	99	66.667	ENSMODG00000007433	TRMU	97	66.667	Monodelphis_domestica
ENSPLAG00000008414	trmu	99	83.373	ENSMALG00000007721	trmu	99	83.373	Monopterus_albus
ENSPLAG00000008414	trmu	98	69.682	MGP_CAROLIEiJ_G0020134	Trmu	98	69.682	Mus_caroli
ENSPLAG00000008414	trmu	99	69.586	ENSMUSG00000022386	Trmu	99	69.586	Mus_musculus
ENSPLAG00000008414	trmu	99	69.343	MGP_PahariEiJ_G0020139	Trmu	99	69.343	Mus_pahari
ENSPLAG00000008414	trmu	99	69.586	MGP_SPRETEiJ_G0021031	Trmu	99	69.586	Mus_spretus
ENSPLAG00000008414	trmu	99	71.325	ENSMPUG00000002523	TRMU	99	71.325	Mustela_putorius_furo
ENSPLAG00000008414	trmu	99	70.531	ENSNGAG00000005132	Trmu	99	70.531	Nannospalax_galili
ENSPLAG00000008414	trmu	99	87.440	ENSNBRG00000022690	trmu	99	89.000	Neolamprologus_brichardi
ENSPLAG00000008414	trmu	99	70.361	ENSNLEG00000015773	TRMU	99	70.361	Nomascus_leucogenys
ENSPLAG00000008414	trmu	79	59.939	ENSMEUG00000000216	TRMU	99	59.939	Notamacropus_eugenii
ENSPLAG00000008414	trmu	100	70.192	ENSODEG00000014745	TRMU	100	70.335	Octodon_degus
ENSPLAG00000008414	trmu	99	87.198	ENSONIG00000009821	trmu	99	87.198	Oreochromis_niloticus
ENSPLAG00000008414	trmu	92	68.490	ENSOANG00000001891	TRMU	97	68.490	Ornithorhynchus_anatinus
ENSPLAG00000008414	trmu	92	71.875	ENSOCUG00000003664	TRMU	96	70.647	Oryctolagus_cuniculus
ENSPLAG00000008414	trmu	99	82.439	ENSORLG00000019015	trmu	99	82.439	Oryzias_latipes
ENSPLAG00000008414	trmu	99	82.927	ENSORLG00020006830	trmu	99	82.927	Oryzias_latipes_hni
ENSPLAG00000008414	trmu	99	82.927	ENSORLG00015003907	trmu	99	82.927	Oryzias_latipes_hsok
ENSPLAG00000008414	trmu	60	82.258	ENSOMEG00000015541	trmu	90	82.258	Oryzias_melastigma
ENSPLAG00000008414	trmu	99	70.264	ENSOGAG00000008096	TRMU	100	70.264	Otolemur_garnettii
ENSPLAG00000008414	trmu	91	68.947	ENSOARG00000019475	TRMU	93	68.947	Ovis_aries
ENSPLAG00000008414	trmu	99	70.602	ENSPPAG00000033944	TRMU	99	70.602	Pan_paniscus
ENSPLAG00000008414	trmu	96	73.434	ENSPPRG00000004197	TRMU	98	71.635	Panthera_pardus
ENSPLAG00000008414	trmu	67	73.285	ENSPTIG00000014122	TRMU	97	75.379	Panthera_tigris_altaica
ENSPLAG00000008414	trmu	99	70.602	ENSPTRG00000014510	TRMU	99	70.602	Pan_troglodytes
ENSPLAG00000008414	trmu	95	72.152	ENSPANG00000023074	TRMU	97	69.041	Papio_anubis
ENSPLAG00000008414	trmu	99	76.699	ENSPKIG00000002849	trmu	99	76.699	Paramormyrops_kingsleyae
ENSPLAG00000008414	trmu	88	73.626	ENSPSIG00000013020	TRMU	95	73.626	Pelodiscus_sinensis
ENSPLAG00000008414	trmu	99	82.609	ENSPMGG00000004083	trmu	99	82.609	Periophthalmus_magnuspinnatus
ENSPLAG00000008414	trmu	99	69.586	ENSPEMG00000014007	Trmu	99	69.586	Peromyscus_maniculatus_bairdii
ENSPLAG00000008414	trmu	96	66.750	ENSPCIG00000009923	TRMU	95	66.584	Phascolarctos_cinereus
ENSPLAG00000008414	trmu	98	96.305	ENSPFOG00000008197	trmu	91	96.305	Poecilia_formosa
ENSPLAG00000008414	trmu	99	99.518	ENSPMEG00000004326	trmu	99	99.518	Poecilia_mexicana
ENSPLAG00000008414	trmu	100	98.317	ENSPREG00000007980	trmu	100	98.317	Poecilia_reticulata
ENSPLAG00000008414	trmu	99	71.084	ENSPPYG00000011949	TRMU	99	71.084	Pongo_abelii
ENSPLAG00000008414	trmu	93	63.824	ENSPCAG00000013462	TRMU	99	63.824	Procavia_capensis
ENSPLAG00000008414	trmu	99	70.316	ENSPCOG00000016539	TRMU	99	70.316	Propithecus_coquereli
ENSPLAG00000008414	trmu	96	66.917	ENSPVAG00000013202	TRMU	99	65.385	Pteropus_vampyrus
ENSPLAG00000008414	trmu	99	86.957	ENSPNYG00000005629	trmu	99	86.957	Pundamilia_nyererei
ENSPLAG00000008414	trmu	98	79.218	ENSPNAG00000006339	trmu	96	79.218	Pygocentrus_nattereri
ENSPLAG00000008414	trmu	99	69.830	ENSRNOG00000016465	Trmu	99	69.830	Rattus_norvegicus
ENSPLAG00000008414	trmu	99	69.880	ENSRBIG00000038973	TRMU	99	69.880	Rhinopithecus_bieti
ENSPLAG00000008414	trmu	99	70.120	ENSRROG00000004267	TRMU	99	70.120	Rhinopithecus_roxellana
ENSPLAG00000008414	trmu	92	33.911	YDL033C	SLM3	92	33.911	Saccharomyces_cerevisiae
ENSPLAG00000008414	trmu	99	70.120	ENSSBOG00000030184	TRMU	99	70.120	Saimiri_boliviensis_boliviensis
ENSPLAG00000008414	trmu	92	75.066	ENSSFOG00015020664	trmu	100	75.066	Scleropages_formosus
ENSPLAG00000008414	trmu	99	84.746	ENSSMAG00000019450	trmu	99	84.746	Scophthalmus_maximus
ENSPLAG00000008414	trmu	99	86.506	ENSSDUG00000011913	trmu	99	86.506	Seriola_dumerili
ENSPLAG00000008414	trmu	99	86.265	ENSSLDG00000011684	trmu	99	86.265	Seriola_lalandi_dorsalis
ENSPLAG00000008414	trmu	95	62.025	ENSSPUG00000017123	TRMU	93	62.025	Sphenodon_punctatus
ENSPLAG00000008414	trmu	99	84.541	ENSSPAG00000021875	trmu	99	84.541	Stegastes_partitus
ENSPLAG00000008414	trmu	97	71.712	ENSSSCG00000000007	TRMU	99	69.928	Sus_scrofa
ENSPLAG00000008414	trmu	89	75.067	ENSTGUG00000003663	-	100	75.067	Taeniopygia_guttata
ENSPLAG00000008414	trmu	99	83.293	ENSTRUG00000001231	trmu	100	83.293	Takifugu_rubripes
ENSPLAG00000008414	trmu	99	83.373	ENSTNIG00000010484	trmu	98	83.373	Tetraodon_nigroviridis
ENSPLAG00000008414	trmu	75	56.303	ENSTBEG00000011276	-	80	56.303	Tupaia_belangeri
ENSPLAG00000008414	trmu	96	73.434	ENSTTRG00000004160	TRMU	95	73.434	Tursiops_truncatus
ENSPLAG00000008414	trmu	70	75.258	ENSUAMG00000024825	TRMU	97	75.258	Ursus_americanus
ENSPLAG00000008414	trmu	95	61.266	ENSUMAG00000019079	TRMU	97	75.097	Ursus_maritimus
ENSPLAG00000008414	trmu	53	63.470	ENSVPAG00000000685	-	100	63.470	Vicugna_pacos
ENSPLAG00000008414	trmu	99	70.602	ENSVVUG00000024963	TRMU	99	70.602	Vulpes_vulpes
ENSPLAG00000008414	trmu	99	72.705	ENSXETG00000023304	trmu	97	72.705	Xenopus_tropicalis
ENSPLAG00000008414	trmu	100	94.033	ENSXCOG00000015105	trmu	100	94.033	Xiphophorus_couchianus
ENSPLAG00000008414	trmu	100	96.394	ENSXMAG00000006697	trmu	100	96.394	Xiphophorus_maculatus