EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000008416 (Gene tree)
Gene ID: 106955036
Gene Symbol: srsf1b
Alias: -
Full Name: serine/arginine-rich splicing factor 1B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 2735 bases
Position: chrKQ546015.1:41190-43924
Accession: 106955036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023234	RRM_1	PF00076.22	1.9e-33	1	2
ENSPLAP00000023234	RRM_1	PF00076.22	1.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006452	-	1092	XM_015044984	ENSPLAP00000023234	246 (aa)	XP_014900470	UPI000443F7BD

Gene Model

Click here to download ENSPLAG00000008416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000008416	srsf1b	81	40.553	ENSPLAG00000005508	srsf5a	65	40.553
ENSPLAG00000008416	srsf1b	89	70.886	ENSPLAG00000019613	-	71	87.293
ENSPLAG00000008416	srsf1b	94	41.825	ENSPLAG00000006480	srsf5b	57	48.315
ENSPLAG00000008416	srsf1b	73	68.132	ENSPLAG00000022740	srsf9	73	67.582
ENSPLAG00000008416	srsf1b	92	33.740	ENSPLAG00000008812	srsf4	86	37.302
ENSPLAG00000008416	srsf1b	77	87.302	ENSPLAG00000019553	-	92	84.324
ENSPLAG00000008416	srsf1b	79	40.102	ENSPLAG00000009243	srsf6a	79	37.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008416	srsf1b	98	85.714	ENSG00000136450	SRSF1	94	86.911	Homo_sapiens
ENSPLAG00000008416	srsf1b	79	92.462	ENSAPOG00000008542	-	81	92.118	Acanthochromis_polyacanthus
ENSPLAG00000008416	srsf1b	78	87.565	ENSAPOG00000002748	-	79	87.310	Acanthochromis_polyacanthus
ENSPLAG00000008416	srsf1b	79	85.567	ENSAMEG00000002635	SRSF1	79	87.879	Ailuropoda_melanoleuca
ENSPLAG00000008416	srsf1b	78	87.047	ENSACIG00000008091	srsf1a	84	86.802	Amphilophus_citrinellus
ENSPLAG00000008416	srsf1b	78	87.565	ENSAOCG00000010671	-	84	87.310	Amphiprion_ocellaris
ENSPLAG00000008416	srsf1b	79	92.462	ENSAOCG00000000337	-	82	92.118	Amphiprion_ocellaris
ENSPLAG00000008416	srsf1b	79	92.462	ENSAPEG00000023352	-	81	92.118	Amphiprion_percula
ENSPLAG00000008416	srsf1b	78	87.565	ENSAPEG00000009915	-	84	87.310	Amphiprion_percula
ENSPLAG00000008416	srsf1b	83	88.725	ENSATEG00000021567	-	82	91.542	Anabas_testudineus
ENSPLAG00000008416	srsf1b	78	87.565	ENSATEG00000022403	-	79	87.310	Anabas_testudineus
ENSPLAG00000008416	srsf1b	79	88.660	ENSACAG00000005542	-	79	88.889	Anolis_carolinensis
ENSPLAG00000008416	srsf1b	98	85.714	ENSANAG00000020583	-	96	82.857	Aotus_nancymaae
ENSPLAG00000008416	srsf1b	80	63.636	ENSANAG00000025417	-	75	62.626	Aotus_nancymaae
ENSPLAG00000008416	srsf1b	95	83.817	ENSAMXG00000035996	srsf1a	81	88.235	Astyanax_mexicanus
ENSPLAG00000008416	srsf1b	54	76.623	ENSAMXG00000024373	-	73	77.500	Astyanax_mexicanus
ENSPLAG00000008416	srsf1b	98	85.714	ENSBTAG00000014766	SRSF1	79	89.899	Bos_taurus
ENSPLAG00000008416	srsf1b	98	85.714	ENSCJAG00000041713	-	96	82.857	Callithrix_jacchus
ENSPLAG00000008416	srsf1b	79	82.474	ENSCJAG00000008111	-	88	82.828	Callithrix_jacchus
ENSPLAG00000008416	srsf1b	98	85.714	ENSCAFG00000017430	SRSF1	78	89.899	Canis_familiaris
ENSPLAG00000008416	srsf1b	98	85.714	ENSCAFG00020025632	-	78	89.899	Canis_lupus_dingo
ENSPLAG00000008416	srsf1b	79	89.691	ENSCHIG00000010787	SRSF1	79	89.899	Capra_hircus
ENSPLAG00000008416	srsf1b	98	85.714	ENSTSYG00000013899	-	96	82.857	Carlito_syrichta
ENSPLAG00000008416	srsf1b	98	85.714	ENSCPOG00000032681	-	79	89.899	Cavia_porcellus
ENSPLAG00000008416	srsf1b	98	85.714	ENSCCAG00000029484	-	96	82.857	Cebus_capucinus
ENSPLAG00000008416	srsf1b	98	85.714	ENSCATG00000042294	-	96	82.857	Cercocebus_atys
ENSPLAG00000008416	srsf1b	98	85.714	ENSCLAG00000014707	-	79	89.899	Chinchilla_lanigera
ENSPLAG00000008416	srsf1b	98	84.898	ENSCSAG00000005642	-	78	88.889	Chlorocebus_sabaeus
ENSPLAG00000008416	srsf1b	79	89.691	ENSCHOG00000001899	SRSF1	79	89.899	Choloepus_hoffmanni
ENSPLAG00000008416	srsf1b	98	85.306	ENSCPBG00000009851	-	79	89.394	Chrysemys_picta_bellii
ENSPLAG00000008416	srsf1b	98	85.714	ENSCANG00000029726	-	96	82.857	Colobus_angolensis_palliatus
ENSPLAG00000008416	srsf1b	98	85.714	ENSCGRG00001000670	Srsf1	78	89.899	Cricetulus_griseus_chok1gshd
ENSPLAG00000008416	srsf1b	98	85.714	ENSCGRG00000005590	Srsf1	79	89.899	Cricetulus_griseus_crigri
ENSPLAG00000008416	srsf1b	79	83.732	ENSCSEG00000009973	-	81	83.568	Cynoglossus_semilaevis
ENSPLAG00000008416	srsf1b	78	87.692	ENSCSEG00000014272	-	80	87.940	Cynoglossus_semilaevis
ENSPLAG00000008416	srsf1b	100	98.785	ENSCVAG00000005458	-	100	98.785	Cyprinodon_variegatus
ENSPLAG00000008416	srsf1b	78	87.565	ENSCVAG00000018617	-	79	87.310	Cyprinodon_variegatus
ENSPLAG00000008416	srsf1b	80	86.341	ENSDARG00000057691	srsf1a	100	86.528	Danio_rerio
ENSPLAG00000008416	srsf1b	80	89.796	ENSDARG00000017843	srsf1b	81	90.000	Danio_rerio
ENSPLAG00000008416	srsf1b	98	85.714	ENSDNOG00000011737	-	78	89.899	Dasypus_novemcinctus
ENSPLAG00000008416	srsf1b	98	85.714	ENSDORG00000015082	Srsf1	79	89.899	Dipodomys_ordii
ENSPLAG00000008416	srsf1b	74	88.462	ENSETEG00000005349	-	62	89.011	Echinops_telfairi
ENSPLAG00000008416	srsf1b	98	85.714	ENSEASG00005002922	-	78	89.899	Equus_asinus_asinus
ENSPLAG00000008416	srsf1b	79	89.691	ENSECAG00000016654	SRSF1	79	89.899	Equus_caballus
ENSPLAG00000008416	srsf1b	74	89.560	ENSEEUG00000009255	-	62	90.110	Erinaceus_europaeus
ENSPLAG00000008416	srsf1b	80	88.265	ENSELUG00000021646	srsf1a	79	88.000	Esox_lucius
ENSPLAG00000008416	srsf1b	98	85.714	ENSFCAG00000002250	-	91	89.617	Felis_catus
ENSPLAG00000008416	srsf1b	75	85.821	ENSFALG00000005062	-	78	69.697	Ficedula_albicollis
ENSPLAG00000008416	srsf1b	98	85.714	ENSFDAG00000010646	-	79	89.899	Fukomys_damarensis
ENSPLAG00000008416	srsf1b	78	87.565	ENSFHEG00000003174	srsf1a	84	87.310	Fundulus_heteroclitus
ENSPLAG00000008416	srsf1b	91	83.556	ENSGMOG00000014787	-	81	83.756	Gadus_morhua
ENSPLAG00000008416	srsf1b	79	89.175	ENSGALG00000005525	SRSF1	79	89.394	Gallus_gallus
ENSPLAG00000008416	srsf1b	79	86.082	ENSGACG00000020621	srsf1b	80	84.848	Gasterosteus_aculeatus
ENSPLAG00000008416	srsf1b	98	85.306	ENSGAGG00000022965	-	78	89.394	Gopherus_agassizii
ENSPLAG00000008416	srsf1b	98	85.714	ENSGGOG00000004386	SRSF1	96	82.857	Gorilla_gorilla
ENSPLAG00000008416	srsf1b	78	87.047	ENSHBUG00000016788	srsf1a	81	86.802	Haplochromis_burtoni
ENSPLAG00000008416	srsf1b	67	90.244	ENSHGLG00000000669	-	78	91.667	Heterocephalus_glaber_female
ENSPLAG00000008416	srsf1b	67	90.244	ENSHGLG00000000600	-	78	91.667	Heterocephalus_glaber_female
ENSPLAG00000008416	srsf1b	98	85.714	ENSHGLG00100016906	-	79	89.899	Heterocephalus_glaber_male
ENSPLAG00000008416	srsf1b	80	82.412	ENSHCOG00000018918	srsf1a	79	84.236	Hippocampus_comes
ENSPLAG00000008416	srsf1b	79	89.744	ENSIPUG00000008750	srsf1b	80	89.447	Ictalurus_punctatus
ENSPLAG00000008416	srsf1b	93	81.590	ENSIPUG00000017039	srsf1a	80	87.624	Ictalurus_punctatus
ENSPLAG00000008416	srsf1b	98	85.714	ENSSTOG00000000243	-	91	89.617	Ictidomys_tridecemlineatus
ENSPLAG00000008416	srsf1b	51	84.000	ENSJJAG00000014464	-	93	83.333	Jaculus_jaculus
ENSPLAG00000008416	srsf1b	98	85.714	ENSJJAG00000000102	-	79	89.899	Jaculus_jaculus
ENSPLAG00000008416	srsf1b	78	87.565	ENSKMAG00000019232	srsf1a	79	87.310	Kryptolebias_marmoratus
ENSPLAG00000008416	srsf1b	80	85.930	ENSLBEG00000015294	-	82	87.192	Labrus_bergylta
ENSPLAG00000008416	srsf1b	78	87.565	ENSLBEG00000020864	-	84	87.310	Labrus_bergylta
ENSPLAG00000008416	srsf1b	79	86.667	ENSLACG00000014160	srsf1a	74	87.374	Latimeria_chalumnae
ENSPLAG00000008416	srsf1b	79	88.660	ENSLOCG00000005994	srsf1a	79	88.384	Lepisosteus_oculatus
ENSPLAG00000008416	srsf1b	79	89.691	ENSLAFG00000025743	SRSF1	79	89.899	Loxodonta_africana
ENSPLAG00000008416	srsf1b	98	85.714	ENSMFAG00000040003	-	96	82.857	Macaca_fascicularis
ENSPLAG00000008416	srsf1b	79	86.598	ENSMMUG00000003260	-	94	86.224	Macaca_mulatta
ENSPLAG00000008416	srsf1b	98	85.714	ENSMMUG00000004725	SRSF1	96	82.857	Macaca_mulatta
ENSPLAG00000008416	srsf1b	98	85.714	ENSMNEG00000027680	-	96	82.857	Macaca_nemestrina
ENSPLAG00000008416	srsf1b	79	86.082	ENSMNEG00000015983	-	78	86.364	Macaca_nemestrina
ENSPLAG00000008416	srsf1b	79	89.691	ENSMLEG00000040509	SRSF1	79	89.899	Mandrillus_leucophaeus
ENSPLAG00000008416	srsf1b	79	84.536	ENSMLEG00000015243	-	77	85.354	Mandrillus_leucophaeus
ENSPLAG00000008416	srsf1b	79	90.206	ENSMAMG00000019691	-	81	89.899	Mastacembelus_armatus
ENSPLAG00000008416	srsf1b	78	87.565	ENSMAMG00000018454	-	79	87.310	Mastacembelus_armatus
ENSPLAG00000008416	srsf1b	79	90.206	ENSMAMG00000019687	-	80	90.404	Mastacembelus_armatus
ENSPLAG00000008416	srsf1b	98	85.714	ENSMAUG00000021845	Srsf1	79	89.899	Mesocricetus_auratus
ENSPLAG00000008416	srsf1b	98	85.714	ENSMICG00000013639	-	96	82.857	Microcebus_murinus
ENSPLAG00000008416	srsf1b	98	85.714	ENSMOCG00000001996	Srsf1	79	89.899	Microtus_ochrogaster
ENSPLAG00000008416	srsf1b	78	87.047	ENSMMOG00000014354	srsf1a	84	86.802	Mola_mola
ENSPLAG00000008416	srsf1b	74	89.560	ENSMODG00000014781	-	62	89.560	Monodelphis_domestica
ENSPLAG00000008416	srsf1b	78	87.047	ENSMALG00000017129	-	76	86.802	Monopterus_albus
ENSPLAG00000008416	srsf1b	82	75.124	ENSMALG00000007763	-	79	78.788	Monopterus_albus
ENSPLAG00000008416	srsf1b	98	85.714	MGP_CAROLIEiJ_G0016943	Srsf1	91	89.617	Mus_caroli
ENSPLAG00000008416	srsf1b	98	85.714	ENSMUSG00000018379	Srsf1	91	89.617	Mus_musculus
ENSPLAG00000008416	srsf1b	98	85.714	MGP_PahariEiJ_G0018074	Srsf1	79	89.899	Mus_pahari
ENSPLAG00000008416	srsf1b	98	85.714	MGP_SPRETEiJ_G0017790	Srsf1	91	89.617	Mus_spretus
ENSPLAG00000008416	srsf1b	79	89.691	ENSMPUG00000015369	SRSF1	79	89.899	Mustela_putorius_furo
ENSPLAG00000008416	srsf1b	82	83.085	ENSMLUG00000023995	-	79	83.333	Myotis_lucifugus
ENSPLAG00000008416	srsf1b	79	89.691	ENSMLUG00000011040	SRSF1	79	89.899	Myotis_lucifugus
ENSPLAG00000008416	srsf1b	79	89.691	ENSNGAG00000011395	Srsf1	79	89.899	Nannospalax_galili
ENSPLAG00000008416	srsf1b	98	78.099	ENSNBRG00000008041	srsf1b	80	76.263	Neolamprologus_brichardi
ENSPLAG00000008416	srsf1b	98	85.714	ENSNLEG00000008088	-	96	82.857	Nomascus_leucogenys
ENSPLAG00000008416	srsf1b	50	86.290	ENSMEUG00000002783	-	98	85.600	Notamacropus_eugenii
ENSPLAG00000008416	srsf1b	54	90.909	ENSOPRG00000001234	-	74	92.647	Ochotona_princeps
ENSPLAG00000008416	srsf1b	98	85.714	ENSODEG00000011481	-	79	89.899	Octodon_degus
ENSPLAG00000008416	srsf1b	94	87.879	ENSONIG00000004860	-	81	88.889	Oreochromis_niloticus
ENSPLAG00000008416	srsf1b	78	87.047	ENSONIG00000013160	-	78	86.802	Oreochromis_niloticus
ENSPLAG00000008416	srsf1b	98	67.068	ENSOCUG00000010894	-	76	72.165	Oryctolagus_cuniculus
ENSPLAG00000008416	srsf1b	78	87.565	ENSORLG00000004580	srsf1a	79	87.310	Oryzias_latipes
ENSPLAG00000008416	srsf1b	78	87.565	ENSORLG00020009456	srsf1a	84	87.310	Oryzias_latipes_hni
ENSPLAG00000008416	srsf1b	78	87.565	ENSORLG00015014384	srsf1a	84	87.310	Oryzias_latipes_hsok
ENSPLAG00000008416	srsf1b	72	86.932	ENSOMEG00000004106	srsf1a	73	86.667	Oryzias_melastigma
ENSPLAG00000008416	srsf1b	84	89.320	ENSOGAG00000025950	-	79	89.899	Otolemur_garnettii
ENSPLAG00000008416	srsf1b	79	85.052	ENSOARG00000008323	SRSF1	78	84.848	Ovis_aries
ENSPLAG00000008416	srsf1b	98	85.714	ENSPPAG00000043403	-	96	82.857	Pan_paniscus
ENSPLAG00000008416	srsf1b	98	85.714	ENSPPRG00000004238	-	91	89.617	Panthera_pardus
ENSPLAG00000008416	srsf1b	98	85.714	ENSPTRG00000049077	SRSF1	96	82.857	Pan_troglodytes
ENSPLAG00000008416	srsf1b	98	85.714	ENSPANG00000022305	-	96	82.857	Papio_anubis
ENSPLAG00000008416	srsf1b	98	66.939	ENSPANG00000030275	-	75	64.141	Papio_anubis
ENSPLAG00000008416	srsf1b	80	87.245	ENSPKIG00000007204	srsf1a	85	87.000	Paramormyrops_kingsleyae
ENSPLAG00000008416	srsf1b	79	89.175	ENSPKIG00000012857	srsf1b	80	88.889	Paramormyrops_kingsleyae
ENSPLAG00000008416	srsf1b	79	82.143	ENSPSIG00000009000	-	74	91.971	Pelodiscus_sinensis
ENSPLAG00000008416	srsf1b	78	84.974	ENSPMGG00000013112	-	86	82.000	Periophthalmus_magnuspinnatus
ENSPLAG00000008416	srsf1b	80	85.787	ENSPMGG00000005467	-	79	87.302	Periophthalmus_magnuspinnatus
ENSPLAG00000008416	srsf1b	98	85.714	ENSPEMG00000021416	Srsf1	79	89.899	Peromyscus_maniculatus_bairdii
ENSPLAG00000008416	srsf1b	79	89.691	ENSPCIG00000006076	-	80	89.394	Phascolarctos_cinereus
ENSPLAG00000008416	srsf1b	100	100.000	ENSPFOG00000018325	-	88	100.000	Poecilia_formosa
ENSPLAG00000008416	srsf1b	100	100.000	ENSPMEG00000002388	-	100	100.000	Poecilia_mexicana
ENSPLAG00000008416	srsf1b	50	82.258	ENSPMEG00000020607	-	98	82.258	Poecilia_mexicana
ENSPLAG00000008416	srsf1b	50	82.258	ENSPMEG00000014312	-	98	82.258	Poecilia_mexicana
ENSPLAG00000008416	srsf1b	78	87.565	ENSPREG00000009667	srsf1a	79	87.310	Poecilia_reticulata
ENSPLAG00000008416	srsf1b	98	85.714	ENSPPYG00000008240	SRSF1	79	89.899	Pongo_abelii
ENSPLAG00000008416	srsf1b	79	89.691	ENSPCAG00000005199	SRSF1	79	89.899	Procavia_capensis
ENSPLAG00000008416	srsf1b	80	71.859	ENSPCOG00000025736	-	94	71.717	Propithecus_coquereli
ENSPLAG00000008416	srsf1b	98	85.714	ENSPCOG00000023654	-	96	82.857	Propithecus_coquereli
ENSPLAG00000008416	srsf1b	53	95.652	ENSPVAG00000000519	-	54	94.521	Pteropus_vampyrus
ENSPLAG00000008416	srsf1b	95	84.388	ENSPNAG00000022241	srsf1a	80	88.000	Pygocentrus_nattereri
ENSPLAG00000008416	srsf1b	79	87.113	ENSPNAG00000014601	srsf1b	80	86.869	Pygocentrus_nattereri
ENSPLAG00000008416	srsf1b	79	89.691	ENSRNOG00000050323	Srsf1	79	89.899	Rattus_norvegicus
ENSPLAG00000008416	srsf1b	98	85.714	ENSRBIG00000034445	-	96	82.857	Rhinopithecus_bieti
ENSPLAG00000008416	srsf1b	98	85.714	ENSRROG00000041506	-	96	82.857	Rhinopithecus_roxellana
ENSPLAG00000008416	srsf1b	98	85.714	ENSSBOG00000025377	-	96	82.857	Saimiri_boliviensis_boliviensis
ENSPLAG00000008416	srsf1b	79	89.691	ENSSHAG00000002552	-	80	89.394	Sarcophilus_harrisii
ENSPLAG00000008416	srsf1b	79	88.144	ENSSFOG00015004800	srsf1a	79	87.879	Scleropages_formosus
ENSPLAG00000008416	srsf1b	78	87.047	ENSSMAG00000007018	-	79	86.802	Scophthalmus_maximus
ENSPLAG00000008416	srsf1b	79	89.000	ENSSMAG00000009719	-	80	88.235	Scophthalmus_maximus
ENSPLAG00000008416	srsf1b	98	75.207	ENSSDUG00000003929	-	84	82.000	Seriola_dumerili
ENSPLAG00000008416	srsf1b	78	87.565	ENSSDUG00000011303	-	84	87.310	Seriola_dumerili
ENSPLAG00000008416	srsf1b	93	75.652	ENSSLDG00000016895	-	77	83.243	Seriola_lalandi_dorsalis
ENSPLAG00000008416	srsf1b	78	87.565	ENSSLDG00000010543	-	79	87.310	Seriola_lalandi_dorsalis
ENSPLAG00000008416	srsf1b	79	79.487	ENSSLDG00000016868	-	78	77.387	Seriola_lalandi_dorsalis
ENSPLAG00000008416	srsf1b	74	89.560	ENSSARG00000010949	-	62	90.110	Sorex_araneus
ENSPLAG00000008416	srsf1b	98	85.306	ENSSPUG00000000804	-	92	89.071	Sphenodon_punctatus
ENSPLAG00000008416	srsf1b	78	88.083	ENSSPAG00000022562	-	79	87.817	Stegastes_partitus
ENSPLAG00000008416	srsf1b	80	89.904	ENSSPAG00000014152	-	82	89.151	Stegastes_partitus
ENSPLAG00000008416	srsf1b	98	85.714	ENSSSCG00000017626	-	79	89.899	Sus_scrofa
ENSPLAG00000008416	srsf1b	54	90.226	ENSTGUG00000008416	-	74	91.971	Taeniopygia_guttata
ENSPLAG00000008416	srsf1b	78	86.528	ENSTRUG00000003691	srsf1a	79	86.294	Takifugu_rubripes
ENSPLAG00000008416	srsf1b	78	86.528	ENSTNIG00000016223	srsf1a	79	86.294	Tetraodon_nigroviridis
ENSPLAG00000008416	srsf1b	74	87.912	ENSTBEG00000015378	-	62	88.462	Tupaia_belangeri
ENSPLAG00000008416	srsf1b	54	90.909	ENSTTRG00000007310	SRSF1	74	92.647	Tursiops_truncatus
ENSPLAG00000008416	srsf1b	79	89.691	ENSUAMG00000009858	SRSF1	79	89.899	Ursus_americanus
ENSPLAG00000008416	srsf1b	98	85.714	ENSUMAG00000000455	-	78	89.899	Ursus_maritimus
ENSPLAG00000008416	srsf1b	79	89.175	ENSVPAG00000010094	SRSF1	79	89.394	Vicugna_pacos
ENSPLAG00000008416	srsf1b	98	85.714	ENSVVUG00000011882	-	78	89.899	Vulpes_vulpes
ENSPLAG00000008416	srsf1b	79	87.113	ENSXETG00000008954	srsf1	81	82.870	Xenopus_tropicalis
ENSPLAG00000008416	srsf1b	78	87.565	ENSXMAG00000011766	srsf1a	79	87.310	Xiphophorus_maculatus