EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000008513 (Gene tree)
Gene ID: 106946612
Gene Symbol: sfswap
Alias: -
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 64685 bases
Position: chrKQ545328.1:222132-286816
Accession: 106946612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000006397	DRY_EERY	PF09750.9	3.6e-32	1	1
ENSPLAP00000006397	Surp	PF01805.20	9.5e-29	1	2
ENSPLAP00000006397	Surp	PF01805.20	9.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006325	-	3533	XM_015031058	ENSPLAP00000006397	931 (aa)	XP_014886544	UPI00072E900F

Gene Model

Click here to download ENSPLAG00000008513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008513	sfswap	89	68.022	ENSG00000061936	SFSWAP	67	80.247	Homo_sapiens
ENSPLAG00000008513	sfswap	82	95.652	ENSAPOG00000005784	sfswap	93	95.652	Acanthochromis_polyacanthus
ENSPLAG00000008513	sfswap	97	51.075	ENSAMEG00000013818	SFSWAP	82	59.187	Ailuropoda_melanoleuca
ENSPLAG00000008513	sfswap	77	81.630	ENSAOCG00000016469	sfswap	77	81.191	Amphiprion_ocellaris
ENSPLAG00000008513	sfswap	77	81.630	ENSAPEG00000004965	sfswap	77	81.191	Amphiprion_percula
ENSPLAG00000008513	sfswap	79	80.000	ENSATEG00000021053	sfswap	80	79.195	Anabas_testudineus
ENSPLAG00000008513	sfswap	62	68.633	ENSAPLG00000013808	SFSWAP	72	60.086	Anas_platyrhynchos
ENSPLAG00000008513	sfswap	94	50.688	ENSACAG00000007220	SFSWAP	72	58.974	Anolis_carolinensis
ENSPLAG00000008513	sfswap	99	51.748	ENSANAG00000001518	SFSWAP	84	58.333	Aotus_nancymaae
ENSPLAG00000008513	sfswap	79	79.865	ENSACLG00000020159	sfswap	81	79.865	Astatotilapia_calliptera
ENSPLAG00000008513	sfswap	72	65.512	ENSAMXG00000008657	sfswap	72	66.292	Astyanax_mexicanus
ENSPLAG00000008513	sfswap	82	60.367	ENSBTAG00000000439	SFSWAP	80	60.597	Bos_taurus
ENSPLAG00000008513	sfswap	99	51.848	ENSCJAG00000003613	SFSWAP	78	58.687	Callithrix_jacchus
ENSPLAG00000008513	sfswap	97	53.327	ENSCAFG00000006625	SFSWAP	83	59.384	Canis_familiaris
ENSPLAG00000008513	sfswap	87	48.292	ENSCAFG00020011254	SFSWAP	71	52.991	Canis_lupus_dingo
ENSPLAG00000008513	sfswap	82	60.169	ENSCHIG00000008838	SFSWAP	80	60.455	Capra_hircus
ENSPLAG00000008513	sfswap	61	66.848	ENSTSYG00000010303	SFSWAP	81	60.863	Carlito_syrichta
ENSPLAG00000008513	sfswap	89	68.108	ENSCCAG00000037255	SFSWAP	85	58.199	Cebus_capucinus
ENSPLAG00000008513	sfswap	92	64.090	ENSCATG00000031094	SFSWAP	84	58.904	Cercocebus_atys
ENSPLAG00000008513	sfswap	92	63.119	ENSCLAG00000008380	SFSWAP	76	57.867	Chinchilla_lanigera
ENSPLAG00000008513	sfswap	75	66.667	ENSCHOG00000003578	SFSWAP	82	60.317	Choloepus_hoffmanni
ENSPLAG00000008513	sfswap	97	54.611	ENSCPBG00000024757	SFSWAP	82	58.824	Chrysemys_picta_bellii
ENSPLAG00000008513	sfswap	92	63.840	ENSCANG00000036501	SFSWAP	99	51.118	Colobus_angolensis_palliatus
ENSPLAG00000008513	sfswap	92	62.594	ENSCGRG00001011284	Sfswap	84	59.041	Cricetulus_griseus_chok1gshd
ENSPLAG00000008513	sfswap	92	62.594	ENSCGRG00000017417	Sfswap	74	58.824	Cricetulus_griseus_crigri
ENSPLAG00000008513	sfswap	78	74.764	ENSCSEG00000003773	sfswap	77	74.491	Cynoglossus_semilaevis
ENSPLAG00000008513	sfswap	72	68.575	ENSDARG00000005980	sfswap	73	68.848	Danio_rerio
ENSPLAG00000008513	sfswap	51	68.293	ENSDNOG00000018742	SFSWAP	80	61.516	Dasypus_novemcinctus
ENSPLAG00000008513	sfswap	97	47.521	ENSDORG00000010352	Sfswap	72	53.085	Dipodomys_ordii
ENSPLAG00000008513	sfswap	56	100.000	ENSETEG00000016657	-	60	100.000	Echinops_telfairi
ENSPLAG00000008513	sfswap	57	39.458	ENSEBUG00000016748	SFSWAP	73	38.405	Eptatretus_burgeri
ENSPLAG00000008513	sfswap	97	52.259	ENSEASG00005016502	SFSWAP	83	59.414	Equus_asinus_asinus
ENSPLAG00000008513	sfswap	95	51.724	ENSECAG00000007657	SFSWAP	83	59.414	Equus_caballus
ENSPLAG00000008513	sfswap	86	48.919	ENSEEUG00000001713	SFSWAP	61	68.421	Erinaceus_europaeus
ENSPLAG00000008513	sfswap	99	58.524	ENSELUG00000010942	sfswap	94	63.852	Esox_lucius
ENSPLAG00000008513	sfswap	97	53.115	ENSFCAG00000010778	SFSWAP	71	60.485	Felis_catus
ENSPLAG00000008513	sfswap	69	59.227	ENSFALG00000009577	SFSWAP	71	59.859	Ficedula_albicollis
ENSPLAG00000008513	sfswap	99	53.280	ENSFDAG00000017235	SFSWAP	75	58.856	Fukomys_damarensis
ENSPLAG00000008513	sfswap	50	82.877	ENSGMOG00000009205	sfswap	52	82.877	Gadus_morhua
ENSPLAG00000008513	sfswap	100	95.923	ENSGAFG00000006272	sfswap	100	95.923	Gambusia_affinis
ENSPLAG00000008513	sfswap	74	82.353	ENSGACG00000017647	sfswap	79	65.478	Gasterosteus_aculeatus
ENSPLAG00000008513	sfswap	97	55.026	ENSGAGG00000002611	SFSWAP	79	59.264	Gopherus_agassizii
ENSPLAG00000008513	sfswap	53	64.090	ENSGGOG00000014877	SFSWAP	84	58.630	Gorilla_gorilla
ENSPLAG00000008513	sfswap	79	79.892	ENSHBUG00000005629	sfswap	76	79.892	Haplochromis_burtoni
ENSPLAG00000008513	sfswap	91	62.963	ENSHGLG00000019216	SFSWAP	75	59.178	Heterocephalus_glaber_female
ENSPLAG00000008513	sfswap	91	62.963	ENSHGLG00100019350	SFSWAP	75	59.041	Heterocephalus_glaber_male
ENSPLAG00000008513	sfswap	77	74.150	ENSHCOG00000009475	sfswap	100	68.973	Hippocampus_comes
ENSPLAG00000008513	sfswap	71	68.687	ENSIPUG00000010598	sfswap	74	68.376	Ictalurus_punctatus
ENSPLAG00000008513	sfswap	65	62.954	ENSSTOG00000000773	SFSWAP	75	58.929	Ictidomys_tridecemlineatus
ENSPLAG00000008513	sfswap	70	60.029	ENSJJAG00000006609	Sfswap	71	60.286	Jaculus_jaculus
ENSPLAG00000008513	sfswap	77	82.118	ENSKMAG00000013168	sfswap	77	82.661	Kryptolebias_marmoratus
ENSPLAG00000008513	sfswap	77	77.901	ENSLBEG00000010239	sfswap	78	78.693	Labrus_bergylta
ENSPLAG00000008513	sfswap	70	59.772	ENSLACG00000018678	SFSWAP	71	58.680	Latimeria_chalumnae
ENSPLAG00000008513	sfswap	100	57.345	ENSLOCG00000006202	sfswap	72	64.498	Lepisosteus_oculatus
ENSPLAG00000008513	sfswap	98	53.055	ENSMFAG00000037352	SFSWAP	84	59.041	Macaca_fascicularis
ENSPLAG00000008513	sfswap	99	53.353	ENSMMUG00000020343	SFSWAP	75	59.097	Macaca_mulatta
ENSPLAG00000008513	sfswap	99	53.353	ENSMNEG00000041002	SFSWAP	84	59.097	Macaca_nemestrina
ENSPLAG00000008513	sfswap	92	61.558	ENSMLEG00000035728	SFSWAP	83	56.671	Mandrillus_leucophaeus
ENSPLAG00000008513	sfswap	100	77.450	ENSMAMG00000006631	sfswap	100	76.972	Mastacembelus_armatus
ENSPLAG00000008513	sfswap	79	79.865	ENSMZEG00005017834	SFSWAP	77	79.865	Maylandia_zebra
ENSPLAG00000008513	sfswap	89	68.817	ENSMGAG00000002191	SFSWAP	82	59.091	Meleagris_gallopavo
ENSPLAG00000008513	sfswap	66	63.591	ENSMICG00000004465	SFSWAP	99	51.426	Microcebus_murinus
ENSPLAG00000008513	sfswap	92	63.591	ENSMOCG00000014390	Sfswap	74	58.824	Microtus_ochrogaster
ENSPLAG00000008513	sfswap	85	62.080	ENSMODG00000015581	SFSWAP	67	54.797	Monodelphis_domestica
ENSPLAG00000008513	sfswap	77	78.404	ENSMALG00000012603	sfswap	100	71.050	Monopterus_albus
ENSPLAG00000008513	sfswap	91	63.591	MGP_CAROLIEiJ_G0027780	Sfswap	94	60.526	Mus_caroli
ENSPLAG00000008513	sfswap	91	63.591	ENSMUSG00000029439	Sfswap	94	60.526	Mus_musculus
ENSPLAG00000008513	sfswap	91	63.342	MGP_PahariEiJ_G0024360	Sfswap	94	60.526	Mus_pahari
ENSPLAG00000008513	sfswap	91	63.840	MGP_SPRETEiJ_G0028779	Sfswap	94	60.526	Mus_spretus
ENSPLAG00000008513	sfswap	97	52.984	ENSMPUG00000002218	SFSWAP	74	59.110	Mustela_putorius_furo
ENSPLAG00000008513	sfswap	72	57.339	ENSMLUG00000011296	SFSWAP	77	59.028	Myotis_lucifugus
ENSPLAG00000008513	sfswap	73	58.649	ENSNGAG00000018167	Sfswap	75	57.923	Nannospalax_galili
ENSPLAG00000008513	sfswap	71	78.820	ENSNBRG00000020857	sfswap	75	78.676	Neolamprologus_brichardi
ENSPLAG00000008513	sfswap	98	51.070	ENSNLEG00000008386	SFSWAP	76	58.743	Nomascus_leucogenys
ENSPLAG00000008513	sfswap	62	63.661	ENSOPRG00000006983	-	75	63.750	Ochotona_princeps
ENSPLAG00000008513	sfswap	91	62.103	ENSODEG00000008020	SFSWAP	75	58.992	Octodon_degus
ENSPLAG00000008513	sfswap	97	66.501	ENSONIG00000003757	sfswap	89	72.908	Oreochromis_niloticus
ENSPLAG00000008513	sfswap	66	61.881	ENSOCUG00000002165	SFSWAP	76	56.053	Oryctolagus_cuniculus
ENSPLAG00000008513	sfswap	77	78.177	ENSORLG00000010983	sfswap	100	75.476	Oryzias_latipes
ENSPLAG00000008513	sfswap	77	78.177	ENSORLG00020010779	sfswap	100	75.211	Oryzias_latipes_hni
ENSPLAG00000008513	sfswap	77	78.621	ENSORLG00015023093	sfswap	100	75.979	Oryzias_latipes_hsok
ENSPLAG00000008513	sfswap	77	78.889	ENSOMEG00000022065	sfswap	100	75.902	Oryzias_melastigma
ENSPLAG00000008513	sfswap	82	63.275	ENSOGAG00000016724	SFSWAP	86	57.523	Otolemur_garnettii
ENSPLAG00000008513	sfswap	70	60.169	ENSOARG00000014314	SFSWAP	81	60.455	Ovis_aries
ENSPLAG00000008513	sfswap	89	68.022	ENSPPAG00000036706	SFSWAP	81	60.545	Pan_paniscus
ENSPLAG00000008513	sfswap	97	50.049	ENSPPRG00000017318	SFSWAP	85	58.255	Panthera_pardus
ENSPLAG00000008513	sfswap	89	67.308	ENSPTIG00000004304	SFSWAP	74	67.493	Panthera_tigris_altaica
ENSPLAG00000008513	sfswap	89	68.207	ENSPTRG00000005640	SFSWAP	96	52.311	Pan_troglodytes
ENSPLAG00000008513	sfswap	92	64.090	ENSPANG00000019737	SFSWAP	84	58.904	Papio_anubis
ENSPLAG00000008513	sfswap	72	65.362	ENSPKIG00000008327	sfswap	73	65.621	Paramormyrops_kingsleyae
ENSPLAG00000008513	sfswap	91	63.342	ENSPEMG00000001237	Sfswap	75	58.880	Peromyscus_maniculatus_bairdii
ENSPLAG00000008513	sfswap	85	68.882	ENSPCIG00000006062	SFSWAP	77	58.918	Phascolarctos_cinereus
ENSPLAG00000008513	sfswap	100	99.570	ENSPFOG00000019657	sfswap	100	99.570	Poecilia_formosa
ENSPLAG00000008513	sfswap	100	98.818	ENSPMEG00000008716	sfswap	100	98.818	Poecilia_mexicana
ENSPLAG00000008513	sfswap	100	97.854	ENSPREG00000006692	sfswap	100	97.854	Poecilia_reticulata
ENSPLAG00000008513	sfswap	91	64.090	ENSPPYG00000005129	SFSWAP	76	58.630	Pongo_abelii
ENSPLAG00000008513	sfswap	52	62.374	ENSPCAG00000004977	-	57	61.414	Procavia_capensis
ENSPLAG00000008513	sfswap	92	63.591	ENSPCOG00000023786	SFSWAP	87	56.767	Propithecus_coquereli
ENSPLAG00000008513	sfswap	72	65.363	ENSPNAG00000007073	sfswap	73	67.606	Pygocentrus_nattereri
ENSPLAG00000008513	sfswap	88	67.391	ENSRNOG00000000931	Sfswap	98	45.868	Rattus_norvegicus
ENSPLAG00000008513	sfswap	99	52.021	ENSRBIG00000036330	SFSWAP	99	50.421	Rhinopithecus_bieti
ENSPLAG00000008513	sfswap	92	63.772	ENSSBOG00000026217	SFSWAP	89	56.812	Saimiri_boliviensis_boliviensis
ENSPLAG00000008513	sfswap	93	49.841	ENSSHAG00000014232	SFSWAP	72	59.049	Sarcophilus_harrisii
ENSPLAG00000008513	sfswap	68	67.071	ENSSFOG00015000766	sfswap	70	66.058	Scleropages_formosus
ENSPLAG00000008513	sfswap	77	78.202	ENSSMAG00000018718	sfswap	76	77.415	Scophthalmus_maximus
ENSPLAG00000008513	sfswap	72	67.188	ENSSARG00000000424	SFSWAP	84	60.976	Sorex_araneus
ENSPLAG00000008513	sfswap	60	54.934	ENSSPUG00000010272	SFSWAP	70	56.529	Sphenodon_punctatus
ENSPLAG00000008513	sfswap	76	81.259	ENSSPAG00000014310	sfswap	79	79.973	Stegastes_partitus
ENSPLAG00000008513	sfswap	72	58.136	ENSSSCG00000009744	SFSWAP	74	60.362	Sus_scrofa
ENSPLAG00000008513	sfswap	70	60.815	ENSTGUG00000004623	SFSWAP	74	60.482	Taeniopygia_guttata
ENSPLAG00000008513	sfswap	50	72.662	ENSTBEG00000004983	-	52	72.692	Tupaia_belangeri
ENSPLAG00000008513	sfswap	76	66.579	ENSTTRG00000013478	SFSWAP	73	53.964	Tursiops_truncatus
ENSPLAG00000008513	sfswap	89	66.667	ENSUAMG00000016807	SFSWAP	80	60.895	Ursus_americanus
ENSPLAG00000008513	sfswap	77	67.797	ENSUMAG00000002957	SFSWAP	75	53.566	Ursus_maritimus
ENSPLAG00000008513	sfswap	97	53.327	ENSVVUG00000010753	SFSWAP	74	58.996	Vulpes_vulpes
ENSPLAG00000008513	sfswap	69	57.471	ENSXETG00000009350	sfswap	88	58.515	Xenopus_tropicalis
ENSPLAG00000008513	sfswap	100	96.781	ENSXMAG00000009020	sfswap	100	96.781	Xiphophorus_maculatus