EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000008560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2054 bases
Position: chrKQ547964.1:73233-75286
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000006441	RVT_1	PF00078.27	3.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006258	-	972	-	ENSPLAP00000006441	323 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000008560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000008560	-	64	34.450	ENSPLAG00000023414	-	81	34.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008560	-	51	37.870	ENSAPOG00000015742	-	53	37.870	Acanthochromis_polyacanthus
ENSPLAG00000008560	-	58	32.812	ENSACIG00000022447	-	68	32.812	Amphilophus_citrinellus
ENSPLAG00000008560	-	59	32.474	ENSAOCG00000018248	-	76	32.474	Amphiprion_ocellaris
ENSPLAG00000008560	-	57	31.579	ENSACLG00000012369	-	64	31.579	Astatotilapia_calliptera
ENSPLAG00000008560	-	81	31.203	ENSACLG00000010837	-	65	31.203	Astatotilapia_calliptera
ENSPLAG00000008560	-	59	36.598	ENSACLG00000011319	-	50	36.598	Astatotilapia_calliptera
ENSPLAG00000008560	-	78	32.046	ENSAMXG00000040763	-	65	32.046	Astyanax_mexicanus
ENSPLAG00000008560	-	65	32.710	ENSCVAG00000020933	-	53	32.710	Cyprinodon_variegatus
ENSPLAG00000008560	-	84	39.273	ENSIPUG00000010242	-	73	39.273	Ictalurus_punctatus
ENSPLAG00000008560	-	66	31.718	ENSMAMG00000001976	-	85	31.718	Mastacembelus_armatus
ENSPLAG00000008560	-	83	30.882	ENSMZEG00005011529	-	51	30.882	Maylandia_zebra
ENSPLAG00000008560	-	81	31.579	ENSMZEG00005006211	-	65	31.579	Maylandia_zebra
ENSPLAG00000008560	-	83	30.882	ENSMZEG00005017030	-	51	30.882	Maylandia_zebra
ENSPLAG00000008560	-	60	32.000	ENSMMOG00000007110	-	72	32.000	Mola_mola
ENSPLAG00000008560	-	80	33.080	ENSORLG00000028976	-	69	33.080	Oryzias_latipes
ENSPLAG00000008560	-	80	32.567	ENSORLG00000030126	-	60	32.567	Oryzias_latipes
ENSPLAG00000008560	-	94	30.312	ENSORLG00000028706	-	63	30.312	Oryzias_latipes
ENSPLAG00000008560	-	50	34.783	ENSORLG00020022004	-	55	34.783	Oryzias_latipes_hni
ENSPLAG00000008560	-	76	32.661	ENSORLG00020018629	-	65	32.661	Oryzias_latipes_hni
ENSPLAG00000008560	-	72	32.618	ENSORLG00020007779	-	61	32.618	Oryzias_latipes_hni
ENSPLAG00000008560	-	82	31.227	ENSORLG00020016429	-	52	31.227	Oryzias_latipes_hni
ENSPLAG00000008560	-	94	30.312	ENSORLG00020017925	-	56	30.312	Oryzias_latipes_hni
ENSPLAG00000008560	-	79	30.534	ENSORLG00015021206	-	53	30.534	Oryzias_latipes_hsok
ENSPLAG00000008560	-	80	33.080	ENSORLG00015007976	-	70	33.080	Oryzias_latipes_hsok
ENSPLAG00000008560	-	80	32.308	ENSORLG00015007703	-	66	32.308	Oryzias_latipes_hsok
ENSPLAG00000008560	-	84	32.624	ENSOMEG00000022009	-	61	32.624	Oryzias_melastigma
ENSPLAG00000008560	-	74	33.468	ENSPMEG00000004673	-	61	33.468	Poecilia_mexicana
ENSPLAG00000008560	-	76	34.263	ENSPMEG00000003715	-	84	34.263	Poecilia_mexicana
ENSPLAG00000008560	-	56	30.055	ENSPNYG00000006014	-	72	30.055	Pundamilia_nyererei
ENSPLAG00000008560	-	83	31.690	ENSPNAG00000014375	-	69	31.690	Pygocentrus_nattereri