EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000008701 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 6791 bases
Position: chrKQ548104.1:92091-98881
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000006526	zf-CCHC	PF00098.23	8.4e-09	1	2
ENSPLAP00000006526	zf-CCHC	PF00098.23	8.4e-09	2	2
ENSPLAP00000006526	PAP_assoc	PF03828.19	6.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006100	-	1962	-	ENSPLAP00000006526	653 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000008701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000008701	-	55	66.754	ENSPLAG00000006121	TUT7	93	55.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008701	-	98	61.243	ENSG00000134744	TUT4	98	60.597	Homo_sapiens
ENSPLAG00000008701	-	54	79.155	ENSAPOG00000018983	-	95	79.155	Acanthochromis_polyacanthus
ENSPLAG00000008701	-	98	62.038	ENSAMEG00000009340	TUT4	58	62.482	Ailuropoda_melanoleuca
ENSPLAG00000008701	-	100	81.399	ENSACIG00000018199	TUT4	99	81.399	Amphilophus_citrinellus
ENSPLAG00000008701	-	100	83.212	ENSAOCG00000007862	TUT4	63	82.628	Amphiprion_ocellaris
ENSPLAG00000008701	-	100	83.358	ENSAPEG00000019857	TUT4	66	82.774	Amphiprion_percula
ENSPLAG00000008701	-	100	82.190	ENSATEG00000003823	TUT4	66	81.898	Anabas_testudineus
ENSPLAG00000008701	-	56	66.494	ENSATEG00000022516	-	93	56.012	Anabas_testudineus
ENSPLAG00000008701	-	98	66.921	ENSAPLG00000006345	TUT4	60	66.921	Anas_platyrhynchos
ENSPLAG00000008701	-	100	62.009	ENSACAG00000008282	TUT4	61	62.009	Anolis_carolinensis
ENSPLAG00000008701	-	98	58.563	ENSANAG00000013486	TUT4	57	58.563	Aotus_nancymaae
ENSPLAG00000008701	-	100	81.168	ENSACLG00000023312	TUT4	67	81.022	Astatotilapia_calliptera
ENSPLAG00000008701	-	100	69.152	ENSAMXG00000007030	TUT4	64	69.075	Astyanax_mexicanus
ENSPLAG00000008701	-	98	62.351	ENSBTAG00000002721	TUT4	58	62.500	Bos_taurus
ENSPLAG00000008701	-	93	66.480	ENSCJAG00000021588	TUT4	56	67.039	Callithrix_jacchus
ENSPLAG00000008701	-	98	62.038	ENSCAFG00000003734	TUT4	58	62.334	Canis_familiaris
ENSPLAG00000008701	-	89	66.667	ENSCAFG00020010923	-	91	66.667	Canis_lupus_dingo
ENSPLAG00000008701	-	100	60.029	ENSCHIG00000023944	TUT4	57	61.940	Capra_hircus
ENSPLAG00000008701	-	97	61.286	ENSTSYG00000009885	TUT4	62	61.538	Carlito_syrichta
ENSPLAG00000008701	-	97	56.641	ENSCAPG00000005680	TUT4	61	57.405	Cavia_aperea
ENSPLAG00000008701	-	97	61.480	ENSCPOG00000005086	TUT4	59	63.063	Cavia_porcellus
ENSPLAG00000008701	-	63	75.176	ENSCCAG00000036903	TUT4	52	75.878	Cebus_capucinus
ENSPLAG00000008701	-	55	58.974	ENSCCAG00000025142	-	93	50.739	Cebus_capucinus
ENSPLAG00000008701	-	98	61.300	ENSCATG00000024618	TUT4	55	71.069	Cercocebus_atys
ENSPLAG00000008701	-	97	63.126	ENSCLAG00000005255	TUT4	57	63.733	Chinchilla_lanigera
ENSPLAG00000008701	-	98	61.891	ENSCSAG00000001277	TUT4	58	62.038	Chlorocebus_sabaeus
ENSPLAG00000008701	-	99	84.921	ENSCPBG00000014796	TUT4	58	84.921	Chrysemys_picta_bellii
ENSPLAG00000008701	-	98	60.997	ENSCANG00000036212	TUT4	59	61.730	Colobus_angolensis_palliatus
ENSPLAG00000008701	-	96	63.215	ENSCGRG00001020315	-	56	64.142	Cricetulus_griseus_chok1gshd
ENSPLAG00000008701	-	96	63.215	ENSCGRG00000017571	Tut4	56	64.142	Cricetulus_griseus_crigri
ENSPLAG00000008701	-	100	81.532	ENSCSEG00000002476	TUT4	100	81.682	Cynoglossus_semilaevis
ENSPLAG00000008701	-	100	85.251	ENSCVAG00000012659	TUT4	66	84.661	Cyprinodon_variegatus
ENSPLAG00000008701	-	100	71.174	ENSDARG00000101404	CABZ01065131.1	100	71.768	Danio_rerio
ENSPLAG00000008701	-	98	61.004	ENSDNOG00000013920	TUT4	57	61.743	Dasypus_novemcinctus
ENSPLAG00000008701	-	98	62.742	ENSDORG00000027891	Tut4	61	63.189	Dipodomys_ordii
ENSPLAG00000008701	-	55	64.033	ENSEBUG00000009834	TUT4	59	64.033	Eptatretus_burgeri
ENSPLAG00000008701	-	98	62.202	ENSECAG00000021261	TUT4	61	62.351	Equus_caballus
ENSPLAG00000008701	-	100	72.183	ENSELUG00000024167	TUT4	65	75.214	Esox_lucius
ENSPLAG00000008701	-	98	62.038	ENSFCAG00000003246	TUT4	58	62.334	Felis_catus
ENSPLAG00000008701	-	100	66.471	ENSFALG00000005607	TUT4	61	66.325	Ficedula_albicollis
ENSPLAG00000008701	-	97	63.253	ENSFDAG00000016676	TUT4	57	63.554	Fukomys_damarensis
ENSPLAG00000008701	-	96	88.750	ENSFHEG00000002296	-	97	88.906	Fundulus_heteroclitus
ENSPLAG00000008701	-	96	72.111	ENSGMOG00000001281	TUT4	72	72.419	Gadus_morhua
ENSPLAG00000008701	-	98	66.362	ENSGALG00000010629	TUT4	61	66.362	Gallus_gallus
ENSPLAG00000008701	-	100	98.012	ENSGAFG00000011427	-	100	98.012	Gambusia_affinis
ENSPLAG00000008701	-	98	77.744	ENSGACG00000005282	-	72	77.744	Gasterosteus_aculeatus
ENSPLAG00000008701	-	98	62.918	ENSGAGG00000020531	TUT4	54	62.918	Gopherus_agassizii
ENSPLAG00000008701	-	93	81.180	ENSHBUG00000008564	-	99	81.021	Haplochromis_burtoni
ENSPLAG00000008701	-	97	63.253	ENSHGLG00000000804	TUT4	57	63.554	Heterocephalus_glaber_female
ENSPLAG00000008701	-	97	63.253	ENSHGLG00100002051	TUT4	58	63.554	Heterocephalus_glaber_male
ENSPLAG00000008701	-	100	73.560	ENSHCOG00000009746	-	100	73.560	Hippocampus_comes
ENSPLAG00000008701	-	100	66.071	ENSIPUG00000002638	zcchc11	64	67.564	Ictalurus_punctatus
ENSPLAG00000008701	-	98	62.500	ENSSTOG00000015611	TUT4	61	62.649	Ictidomys_tridecemlineatus
ENSPLAG00000008701	-	100	82.003	ENSKMAG00000017970	TUT4	100	82.003	Kryptolebias_marmoratus
ENSPLAG00000008701	-	100	81.977	ENSLBEG00000006518	TUT4	65	81.686	Labrus_bergylta
ENSPLAG00000008701	-	100	61.912	ENSLACG00000010748	TUT4	58	63.481	Latimeria_chalumnae
ENSPLAG00000008701	-	100	72.474	ENSLOCG00000006248	TUT4	69	72.474	Lepisosteus_oculatus
ENSPLAG00000008701	-	97	62.836	ENSLAFG00000003763	TUT4	57	75.229	Loxodonta_africana
ENSPLAG00000008701	-	98	61.891	ENSMFAG00000011842	TUT4	58	62.038	Macaca_fascicularis
ENSPLAG00000008701	-	88	64.157	ENSMMUG00000017023	TUT4	55	64.321	Macaca_mulatta
ENSPLAG00000008701	-	98	60.997	ENSMNEG00000009839	TUT4	61	61.730	Macaca_nemestrina
ENSPLAG00000008701	-	98	61.300	ENSMLEG00000036158	TUT4	58	62.038	Mandrillus_leucophaeus
ENSPLAG00000008701	-	100	81.314	ENSMAMG00000014890	TUT4	65	80.584	Mastacembelus_armatus
ENSPLAG00000008701	-	100	81.168	ENSMZEG00005017227	TUT4	65	81.022	Maylandia_zebra
ENSPLAG00000008701	-	98	66.566	ENSMGAG00000011185	TUT4	71	66.566	Meleagris_gallopavo
ENSPLAG00000008701	-	98	61.391	ENSMICG00000015853	TUT4	57	61.982	Microcebus_murinus
ENSPLAG00000008701	-	100	76.992	ENSMMOG00000016870	-	100	77.108	Mola_mola
ENSPLAG00000008701	-	55	58.205	ENSMMOG00000017546	-	53	58.205	Mola_mola
ENSPLAG00000008701	-	99	62.669	ENSMODG00000000618	TUT4	60	63.814	Monodelphis_domestica
ENSPLAG00000008701	-	100	79.087	ENSMALG00000014488	-	100	78.351	Monopterus_albus
ENSPLAG00000008701	-	96	63.297	MGP_CAROLIEiJ_G0026268	Tut4	56	64.386	Mus_caroli
ENSPLAG00000008701	-	96	63.297	ENSMUSG00000034610	Tut4	56	64.386	Mus_musculus
ENSPLAG00000008701	-	96	63.297	MGP_PahariEiJ_G0028601	Tut4	56	64.386	Mus_pahari
ENSPLAG00000008701	-	96	63.297	MGP_SPRETEiJ_G0027237	Tut4	56	64.386	Mus_spretus
ENSPLAG00000008701	-	98	62.048	ENSMPUG00000006880	TUT4	57	62.349	Mustela_putorius_furo
ENSPLAG00000008701	-	98	62.182	ENSMLUG00000001067	TUT4	57	62.275	Myotis_lucifugus
ENSPLAG00000008701	-	100	80.502	ENSNBRG00000005683	-	100	80.059	Neolamprologus_brichardi
ENSPLAG00000008701	-	98	62.575	ENSNLEG00000017998	TUT4	58	62.874	Nomascus_leucogenys
ENSPLAG00000008701	-	96	61.760	ENSMEUG00000003865	TUT4	55	63.462	Notamacropus_eugenii
ENSPLAG00000008701	-	97	61.388	ENSODEG00000007328	TUT4	57	62.142	Octodon_degus
ENSPLAG00000008701	-	100	81.460	ENSONIG00000019455	TUT4	71	77.912	Oreochromis_niloticus
ENSPLAG00000008701	-	88	63.328	ENSOANG00000012864	TUT4	57	63.813	Ornithorhynchus_anatinus
ENSPLAG00000008701	-	93	66.791	ENSOCUG00000002390	TUT4	56	67.351	Oryctolagus_cuniculus
ENSPLAG00000008701	-	100	75.780	ENSORLG00000013135	-	100	75.780	Oryzias_latipes
ENSPLAG00000008701	-	100	75.632	ENSORLG00020002631	-	100	75.632	Oryzias_latipes_hni
ENSPLAG00000008701	-	100	76.374	ENSORLG00015001219	-	100	76.374	Oryzias_latipes_hsok
ENSPLAG00000008701	-	100	76.183	ENSOMEG00000015574	-	100	76.339	Oryzias_melastigma
ENSPLAG00000008701	-	97	60.656	ENSOGAG00000005425	TUT4	58	60.767	Otolemur_garnettii
ENSPLAG00000008701	-	97	61.940	ENSOARG00000005494	TUT4	57	62.687	Ovis_aries
ENSPLAG00000008701	-	98	60.997	ENSPPAG00000037653	TUT4	57	64.321	Pan_paniscus
ENSPLAG00000008701	-	98	62.038	ENSPPRG00000020521	TUT4	58	62.334	Panthera_pardus
ENSPLAG00000008701	-	98	62.038	ENSPTIG00000010511	TUT4	58	62.334	Panthera_tigris_altaica
ENSPLAG00000008701	-	98	61.300	ENSPTRG00000000740	TUT4	59	61.730	Pan_troglodytes
ENSPLAG00000008701	-	98	59.531	ENSPANG00000005042	TUT4	58	60.264	Papio_anubis
ENSPLAG00000008701	-	100	70.742	ENSPKIG00000004670	TUT4	94	70.306	Paramormyrops_kingsleyae
ENSPLAG00000008701	-	98	65.957	ENSPSIG00000016704	TUT4	58	65.957	Pelodiscus_sinensis
ENSPLAG00000008701	-	58	62.105	ENSPMGG00000015621	-	66	62.105	Periophthalmus_magnuspinnatus
ENSPLAG00000008701	-	100	61.974	ENSPCIG00000022380	TUT4	60	63.453	Phascolarctos_cinereus
ENSPLAG00000008701	-	100	86.715	ENSPFOG00000002439	TUT4	69	86.311	Poecilia_formosa
ENSPLAG00000008701	-	100	98.928	ENSPMEG00000006996	-	100	98.928	Poecilia_mexicana
ENSPLAG00000008701	-	98	62.351	ENSPPYG00000001347	TUT4	58	62.500	Pongo_abelii
ENSPLAG00000008701	-	98	92.357	ENSPCAG00000013380	TUT4	63	92.357	Procavia_capensis
ENSPLAG00000008701	-	98	61.391	ENSPCOG00000007824	TUT4	60	61.982	Propithecus_coquereli
ENSPLAG00000008701	-	98	61.721	ENSPVAG00000009804	TUT4	59	62.166	Pteropus_vampyrus
ENSPLAG00000008701	-	100	81.168	ENSPNYG00000023175	TUT4	65	81.022	Pundamilia_nyererei
ENSPLAG00000008701	-	100	70.132	ENSPNAG00000022786	TUT4	64	71.449	Pygocentrus_nattereri
ENSPLAG00000008701	-	98	57.164	ENSRBIG00000027989	TUT4	58	57.903	Rhinopithecus_bieti
ENSPLAG00000008701	-	98	61.300	ENSRROG00000034868	TUT4	68	62.038	Rhinopithecus_roxellana
ENSPLAG00000008701	-	98	61.243	ENSSBOG00000013661	TUT4	58	61.834	Saimiri_boliviensis_boliviensis
ENSPLAG00000008701	-	55	58.741	ENSSBOG00000020099	-	93	50.493	Saimiri_boliviensis_boliviensis
ENSPLAG00000008701	-	97	62.963	ENSSHAG00000006231	TUT4	59	63.735	Sarcophilus_harrisii
ENSPLAG00000008701	-	100	71.701	ENSSFOG00015013524	zcchc11	64	71.994	Scleropages_formosus
ENSPLAG00000008701	-	100	82.379	ENSSMAG00000016072	TUT4	70	81.498	Scophthalmus_maximus
ENSPLAG00000008701	-	100	83.772	ENSSDUG00000021923	TUT4	100	83.041	Seriola_dumerili
ENSPLAG00000008701	-	100	83.626	ENSSLDG00000016071	TUT4	65	82.895	Seriola_lalandi_dorsalis
ENSPLAG00000008701	-	100	61.974	ENSSPUG00000013287	TUT4	66	61.974	Sphenodon_punctatus
ENSPLAG00000008701	-	100	76.204	ENSSPAG00000008141	-	100	75.620	Stegastes_partitus
ENSPLAG00000008701	-	97	62.707	ENSSSCG00000003859	TUT4	54	72.881	Sus_scrofa
ENSPLAG00000008701	-	98	67.530	ENSTGUG00000009011	TUT4	60	67.530	Taeniopygia_guttata
ENSPLAG00000008701	-	60	71.694	ENSTRUG00000024719	-	98	71.694	Takifugu_rubripes
ENSPLAG00000008701	-	98	61.152	ENSTTRG00000016142	TUT4	58	61.891	Tursiops_truncatus
ENSPLAG00000008701	-	100	62.372	ENSUAMG00000000759	TUT4	64	78.934	Ursus_americanus
ENSPLAG00000008701	-	98	61.584	ENSUMAG00000022669	TUT4	58	61.883	Ursus_maritimus
ENSPLAG00000008701	-	98	58.333	ENSVPAG00000000910	TUT4	53	58.929	Vicugna_pacos
ENSPLAG00000008701	-	100	62.225	ENSVVUG00000002703	TUT4	86	66.497	Vulpes_vulpes
ENSPLAG00000008701	-	100	61.652	ENSXETG00000008061	tut4	65	62.722	Xenopus_tropicalis
ENSPLAG00000008701	-	100	97.550	ENSXCOG00000007204	-	100	97.550	Xiphophorus_couchianus
ENSPLAG00000008701	-	100	98.009	ENSXMAG00000000751	-	100	98.009	Xiphophorus_maculatus