EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000008812 (Gene tree)
Gene ID: 106934404
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4057 bases
Position: chrKQ547113.1:43073-47129
Accession: 106934404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023372	RRM_1	PF00076.22	3.1e-32	1	2
ENSPLAP00000023372	RRM_1	PF00076.22	3.1e-32	2	2
ENSPLAP00000023381	RRM_1	PF00076.22	3.2e-32	1	2
ENSPLAP00000023381	RRM_1	PF00076.22	3.2e-32	2	2
ENSPLAP00000023353	RRM_1	PF00076.22	8e-22	1	1
ENSPLAP00000006459	RRM_1	PF00076.22	5.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000006217	-	798	-	ENSPLAP00000006459	265 (aa)	-	-
ENSPLAT00000006154	-	801	-	ENSPLAP00000023353	266 (aa)	-	-
ENSPLAT00000006115	-	1035	XM_015014278	ENSPLAP00000023372	344 (aa)	XP_014869764	-
ENSPLAT00000006091	-	1038	-	ENSPLAP00000023381	345 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000008812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000008812	srsf4	63	38.743	ENSPLAG00000022740	srsf9	78	41.791
ENSPLAG00000008812	srsf4	82	48.473	ENSPLAG00000006480	srsf5b	76	56.846
ENSPLAG00000008812	srsf4	97	48.903	ENSPLAG00000009243	srsf6a	80	73.438
ENSPLAG00000008812	srsf4	86	37.302	ENSPLAG00000008416	srsf1b	92	33.740
ENSPLAG00000008812	srsf4	63	55.319	ENSPLAG00000005508	srsf5a	59	54.592
ENSPLAG00000008812	srsf4	61	40.223	ENSPLAG00000019613	-	67	46.023
ENSPLAG00000008812	srsf4	62	40.110	ENSPLAG00000019553	-	82	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008812	srsf4	64	75.956	ENSG00000116350	SRSF4	76	70.588	Homo_sapiens
ENSPLAG00000008812	srsf4	63	68.132	ENSAPOG00000023399	-	97	52.921	Acanthochromis_polyacanthus
ENSPLAG00000008812	srsf4	83	95.652	ENSAPOG00000020244	srsf4	70	98.507	Acanthochromis_polyacanthus
ENSPLAG00000008812	srsf4	81	95.652	ENSACIG00000018649	srsf4	90	95.833	Amphilophus_citrinellus
ENSPLAG00000008812	srsf4	58	79.518	ENSAOCG00000005997	srsf4	92	95.652	Amphiprion_ocellaris
ENSPLAG00000008812	srsf4	63	65.546	ENSAPEG00000020826	srsf4	91	67.133	Amphiprion_percula
ENSPLAG00000008812	srsf4	70	92.647	ENSATEG00000005680	srsf4	96	71.918	Anabas_testudineus
ENSPLAG00000008812	srsf4	70	86.957	ENSANAG00000037134	SRSF4	51	72.157	Aotus_nancymaae
ENSPLAG00000008812	srsf4	64	68.681	ENSACLG00000021269	-	97	55.587	Astatotilapia_calliptera
ENSPLAG00000008812	srsf4	91	95.652	ENSACLG00000003395	srsf4	98	95.588	Astatotilapia_calliptera
ENSPLAG00000008812	srsf4	96	63.670	ENSAMXG00000034811	srsf4	98	88.235	Astyanax_mexicanus
ENSPLAG00000008812	srsf4	63	45.729	WBGene00004698	rsp-1	97	53.793	Caenorhabditis_elegans
ENSPLAG00000008812	srsf4	54	81.944	ENSCAFG00000011669	SRSF4	51	67.490	Canis_familiaris
ENSPLAG00000008812	srsf4	77	74.436	ENSCHIG00000022096	SRSF4	50	77.670	Capra_hircus
ENSPLAG00000008812	srsf4	86	44.275	ENSCING00000012370	-	68	63.000	Ciona_intestinalis
ENSPLAG00000008812	srsf4	78	46.831	ENSCING00000011362	-	65	60.109	Ciona_intestinalis
ENSPLAG00000008812	srsf4	96	43.064	ENSCING00000024718	-	56	58.247	Ciona_intestinalis
ENSPLAG00000008812	srsf4	63	53.886	ENSCING00000020631	-	80	61.538	Ciona_intestinalis
ENSPLAG00000008812	srsf4	63	58.989	ENSCSAVG00000002581	-	70	64.641	Ciona_savignyi
ENSPLAG00000008812	srsf4	64	75.956	ENSCGRG00001021115	Srsf4	53	66.292	Cricetulus_griseus_chok1gshd
ENSPLAG00000008812	srsf4	53	83.099	ENSCGRG00000014137	Srsf4	50	62.338	Cricetulus_griseus_crigri
ENSPLAG00000008812	srsf4	64	95.588	ENSCSEG00000010058	srsf4	81	95.588	Cynoglossus_semilaevis
ENSPLAG00000008812	srsf4	85	64.372	ENSCVAG00000004342	srsf4	85	69.880	Cyprinodon_variegatus
ENSPLAG00000008812	srsf4	78	89.855	ENSDARG00000105293	srsf4	79	89.286	Danio_rerio
ENSPLAG00000008812	srsf4	63	59.563	FBgn0004587	B52	97	60.150	Drosophila_melanogaster
ENSPLAG00000008812	srsf4	52	64.789	ENSEBUG00000003129	srsf4	69	61.392	Eptatretus_burgeri
ENSPLAG00000008812	srsf4	70	51.515	ENSEBUG00000001681	srsf4	67	61.111	Eptatretus_burgeri
ENSPLAG00000008812	srsf4	70	57.868	ENSEBUG00000005588	srsf4	65	47.984	Eptatretus_burgeri
ENSPLAG00000008812	srsf4	93	63.758	ENSELUG00000017551	srsf4	95	75.940	Esox_lucius
ENSPLAG00000008812	srsf4	89	90.032	ENSFHEG00000007472	srsf4	91	98.824	Fundulus_heteroclitus
ENSPLAG00000008812	srsf4	55	87.368	ENSGMOG00000012906	srsf4	82	77.432	Gadus_morhua
ENSPLAG00000008812	srsf4	100	62.931	ENSGALG00000050314	SRSF4	56	89.552	Gallus_gallus
ENSPLAG00000008812	srsf4	91	95.652	ENSGAFG00000018496	srsf4	92	95.588	Gambusia_affinis
ENSPLAG00000008812	srsf4	65	81.967	ENSGACG00000002389	srsf4	56	93.333	Gasterosteus_aculeatus
ENSPLAG00000008812	srsf4	64	68.681	ENSHBUG00000011326	-	95	58.427	Haplochromis_burtoni
ENSPLAG00000008812	srsf4	83	94.203	ENSHCOG00000012540	srsf4	89	98.485	Hippocampus_comes
ENSPLAG00000008812	srsf4	64	75.956	ENSSTOG00000015908	SRSF4	50	71.815	Ictidomys_tridecemlineatus
ENSPLAG00000008812	srsf4	91	92.754	ENSKMAG00000013631	srsf4	80	95.522	Kryptolebias_marmoratus
ENSPLAG00000008812	srsf4	63	66.851	ENSLOCG00000001442	-	78	60.900	Lepisosteus_oculatus
ENSPLAG00000008812	srsf4	81	95.652	ENSMAMG00000004888	srsf4	78	98.507	Mastacembelus_armatus
ENSPLAG00000008812	srsf4	91	95.652	ENSMZEG00005026275	srsf4	78	98.507	Maylandia_zebra
ENSPLAG00000008812	srsf4	100	63.218	ENSMGAG00000002400	SRSF4	61	64.839	Meleagris_gallopavo
ENSPLAG00000008812	srsf4	81	95.652	ENSMMOG00000013653	srsf4	78	95.588	Mola_mola
ENSPLAG00000008812	srsf4	64	76.374	ENSMODG00000011052	SRSF4	56	87.709	Monodelphis_domestica
ENSPLAG00000008812	srsf4	83	95.652	ENSMALG00000013392	srsf4	79	95.588	Monopterus_albus
ENSPLAG00000008812	srsf4	64	61.749	ENSNLEG00000030787	-	62	71.910	Nomascus_leucogenys
ENSPLAG00000008812	srsf4	64	82.967	ENSONIG00000013730	srsf4	70	98.507	Oreochromis_niloticus
ENSPLAG00000008812	srsf4	54	82.517	ENSOANG00000015169	SRSF4	68	56.803	Ornithorhynchus_anatinus
ENSPLAG00000008812	srsf4	65	67.826	ENSORLG00000009430	-	78	63.556	Oryzias_latipes
ENSPLAG00000008812	srsf4	65	82.609	ENSORLG00020016052	srsf4	66	98.324	Oryzias_latipes_hni
ENSPLAG00000008812	srsf4	85	95.652	ENSORLG00015007566	srsf4	85	95.588	Oryzias_latipes_hsok
ENSPLAG00000008812	srsf4	85	95.652	ENSOMEG00000005541	srsf4	88	84.887	Oryzias_melastigma
ENSPLAG00000008812	srsf4	54	81.818	ENSOARG00000002451	SRSF4	58	69.780	Ovis_aries
ENSPLAG00000008812	srsf4	67	32.275	ENSOARG00000017944	-	66	35.455	Ovis_aries
ENSPLAG00000008812	srsf4	75	68.220	ENSPMGG00000013436	srsf4	90	94.118	Periophthalmus_magnuspinnatus
ENSPLAG00000008812	srsf4	63	58.011	ENSPMAG00000009397	srsf4	68	65.241	Petromyzon_marinus
ENSPLAG00000008812	srsf4	99	91.781	ENSPFOG00000001306	srsf4	100	91.781	Poecilia_formosa
ENSPLAG00000008812	srsf4	100	97.414	ENSPMEG00000023638	srsf4	100	97.414	Poecilia_mexicana
ENSPLAG00000008812	srsf4	100	95.170	ENSPREG00000009639	srsf4	100	95.170	Poecilia_reticulata
ENSPLAG00000008812	srsf4	81	65.637	ENSPNYG00000003796	srsf4	91	70.427	Pundamilia_nyererei
ENSPLAG00000008812	srsf4	76	64.730	ENSPNAG00000023844	srsf4	54	91.573	Pygocentrus_nattereri
ENSPLAG00000008812	srsf4	64	75.956	ENSRNOG00000010007	Srsf4	54	54.895	Rattus_norvegicus
ENSPLAG00000008812	srsf4	63	79.444	ENSSFOG00015020292	srsf4	93	82.828	Scleropages_formosus
ENSPLAG00000008812	srsf4	65	81.915	ENSSMAG00000001707	srsf4	50	94.054	Scophthalmus_maximus
ENSPLAG00000008812	srsf4	81	95.652	ENSSDUG00000007387	srsf4	66	98.507	Seriola_dumerili
ENSPLAG00000008812	srsf4	65	67.213	ENSSLDG00000009745	srsf4	98	61.852	Seriola_lalandi_dorsalis
ENSPLAG00000008812	srsf4	64	75.275	ENSSPUG00000015318	-	53	70.229	Sphenodon_punctatus
ENSPLAG00000008812	srsf4	89	95.652	ENSSPAG00000014538	srsf4	83	95.833	Stegastes_partitus
ENSPLAG00000008812	srsf4	89	92.754	ENSTRUG00000011891	srsf4	98	72.207	Takifugu_rubripes
ENSPLAG00000008812	srsf4	65	83.152	ENSTNIG00000005573	srsf4	79	97.015	Tetraodon_nigroviridis
ENSPLAG00000008812	srsf4	68	83.505	ENSTNIG00000000115	-	68	97.015	Tetraodon_nigroviridis
ENSPLAG00000008812	srsf4	64	75.956	ENSUAMG00000006106	SRSF4	52	66.920	Ursus_americanus
ENSPLAG00000008812	srsf4	99	57.307	ENSXETG00000014380	srsf4	53	53.992	Xenopus_tropicalis
ENSPLAG00000008812	srsf4	56	70.854	ENSXCOG00000003212	-	55	75.532	Xiphophorus_couchianus
ENSPLAG00000008812	srsf4	91	94.203	ENSXCOG00000018826	srsf4	95	91.603	Xiphophorus_couchianus
ENSPLAG00000008812	srsf4	77	88.525	ENSXMAG00000005545	srsf4	76	74.569	Xiphophorus_maculatus