EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000008827 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: -
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 974 bases
Position: chrKQ545544.1:499830-500803
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023454	RRM_1	PF00076.22	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000005896	-	528	-	ENSPLAP00000023454	175 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000008827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008827	srek1	98	77.966	ENSG00000153914	SREK1	75	91.111	Homo_sapiens
ENSPLAG00000008827	srek1	100	89.011	ENSACIG00000015041	srek1	97	89.011	Amphilophus_citrinellus
ENSPLAG00000008827	srek1	99	78.212	ENSANAG00000031358	SREK1	92	78.212	Aotus_nancymaae
ENSPLAG00000008827	srek1	99	89.266	ENSACLG00000026754	srek1	61	89.266	Astatotilapia_calliptera
ENSPLAG00000008827	srek1	99	78.212	ENSCJAG00000015950	SREK1	92	78.212	Callithrix_jacchus
ENSPLAG00000008827	srek1	82	84.354	ENSCAFG00020019448	-	74	84.354	Canis_lupus_dingo
ENSPLAG00000008827	srek1	98	78.531	ENSTSYG00000036957	SREK1	92	76.923	Carlito_syrichta
ENSPLAG00000008827	srek1	99	78.212	ENSCATG00000031482	SREK1	92	78.212	Cercocebus_atys
ENSPLAG00000008827	srek1	81	83.448	ENSCPBG00000026866	SREK1	53	77.966	Chrysemys_picta_bellii
ENSPLAG00000008827	srek1	99	78.212	ENSCANG00000030421	SREK1	92	78.212	Colobus_angolensis_palliatus
ENSPLAG00000008827	srek1	99	92.529	ENSCVAG00000002411	srek1	86	92.529	Cyprinodon_variegatus
ENSPLAG00000008827	srek1	99	78.212	ENSDORG00000023425	-	92	78.212	Dipodomys_ordii
ENSPLAG00000008827	srek1	99	76.374	ENSEASG00005006829	-	92	76.374	Equus_asinus_asinus
ENSPLAG00000008827	srek1	99	76.374	ENSECAG00000036994	-	92	76.374	Equus_caballus
ENSPLAG00000008827	srek1	57	80.392	ENSGALG00000043541	SREK1	53	73.881	Gallus_gallus
ENSPLAG00000008827	srek1	99	78.212	ENSGGOG00000004737	SREK1	92	78.212	Gorilla_gorilla
ENSPLAG00000008827	srek1	99	89.266	ENSHBUG00000007057	srek1	96	89.266	Haplochromis_burtoni
ENSPLAG00000008827	srek1	99	87.356	ENSHCOG00000017240	SREK1	53	87.356	Hippocampus_comes
ENSPLAG00000008827	srek1	99	78.212	ENSJJAG00000000214	-	92	78.212	Jaculus_jaculus
ENSPLAG00000008827	srek1	99	87.356	ENSLBEG00000022980	srek1	90	87.356	Labrus_bergylta
ENSPLAG00000008827	srek1	99	78.212	ENSMFAG00000039823	SREK1	92	78.212	Macaca_fascicularis
ENSPLAG00000008827	srek1	99	78.212	ENSMNEG00000030723	SREK1	92	78.212	Macaca_nemestrina
ENSPLAG00000008827	srek1	99	78.212	ENSMLEG00000039078	SREK1	92	78.212	Mandrillus_leucophaeus
ENSPLAG00000008827	srek1	99	89.266	ENSMZEG00005005719	srek1	96	89.266	Maylandia_zebra
ENSPLAG00000008827	srek1	73	75.781	ENSMGAG00000002047	SREK1	68	66.857	Meleagris_gallopavo
ENSPLAG00000008827	srek1	98	75.556	ENSMAUG00000010066	-	57	76.111	Mesocricetus_auratus
ENSPLAG00000008827	srek1	99	78.212	ENSMICG00000034959	SREK1	92	78.212	Microcebus_murinus
ENSPLAG00000008827	srek1	98	75.556	ENSMOCG00000001536	-	56	76.111	Microtus_ochrogaster
ENSPLAG00000008827	srek1	99	89.655	ENSMMOG00000008409	srek1	91	89.655	Mola_mola
ENSPLAG00000008827	srek1	99	75.824	ENSNGAG00000017527	-	92	76.374	Nannospalax_galili
ENSPLAG00000008827	srek1	99	88.268	ENSNBRG00000010718	srek1	96	88.268	Neolamprologus_brichardi
ENSPLAG00000008827	srek1	99	94.798	ENSONIG00000011080	srek1	50	93.714	Oreochromis_niloticus
ENSPLAG00000008827	srek1	99	88.462	ENSORLG00015020471	srek1	94	88.462	Oryzias_latipes_hsok
ENSPLAG00000008827	srek1	99	78.212	ENSPPAG00000031605	SREK1	92	78.212	Pan_paniscus
ENSPLAG00000008827	srek1	99	78.212	ENSPTRG00000016936	SREK1	92	78.212	Pan_troglodytes
ENSPLAG00000008827	srek1	99	78.212	ENSPANG00000008953	SREK1	92	78.212	Papio_anubis
ENSPLAG00000008827	srek1	99	84.483	ENSPMGG00000017031	srek1	98	84.483	Periophthalmus_magnuspinnatus
ENSPLAG00000008827	srek1	98	75.556	ENSPEMG00000024051	-	58	76.111	Peromyscus_maniculatus_bairdii
ENSPLAG00000008827	srek1	99	78.212	ENSPCIG00000017750	-	92	78.212	Phascolarctos_cinereus
ENSPLAG00000008827	srek1	96	98.214	ENSPREG00000019912	srek1	98	98.214	Poecilia_reticulata
ENSPLAG00000008827	srek1	99	78.212	ENSPCOG00000026230	SREK1	92	78.212	Propithecus_coquereli
ENSPLAG00000008827	srek1	98	77.966	ENSRBIG00000033818	SREK1	92	76.087	Rhinopithecus_bieti
ENSPLAG00000008827	srek1	99	78.212	ENSRROG00000017210	SREK1	92	78.212	Rhinopithecus_roxellana
ENSPLAG00000008827	srek1	99	78.212	ENSSBOG00000031230	SREK1	92	78.212	Saimiri_boliviensis_boliviensis
ENSPLAG00000008827	srek1	99	77.778	ENSSPUG00000016553	SREK1	58	77.778	Sphenodon_punctatus
ENSPLAG00000008827	srek1	99	94.253	ENSSPAG00000022298	srek1	98	94.253	Stegastes_partitus
ENSPLAG00000008827	srek1	99	85.057	ENSTRUG00000002960	srek1	96	85.057	Takifugu_rubripes
ENSPLAG00000008827	srek1	99	78.212	ENSUAMG00000022661	-	92	78.212	Ursus_americanus
ENSPLAG00000008827	srek1	82	84.354	ENSVVUG00000005890	-	74	84.354	Vulpes_vulpes
ENSPLAG00000008827	srek1	100	93.258	ENSXCOG00000017793	srek1	97	93.258	Xiphophorus_couchianus