EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000008844 (Gene tree)
Gene ID: 106952373
Gene Symbol: -
Alias: -
Full Name: replication protein A 70 kDa DNA-binding subunit-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 28011 bases
Position: chrKQ545825.1:2344-30354
Accession: 106952373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023462	tRNA_anti-codon	PF01336.25	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000005863	-	2031	XM_015040441	ENSPLAP00000023462	637 (aa)	XP_014895927	-

Gene Model

Click here to download ENSPLAG00000008844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000008844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000008844	-	97	58.766	ENSPLAG00000004984	rpa1	94	58.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000008844	-	97	73.708	ENSAPOG00000019409	RPA1	95	73.556	Acanthochromis_polyacanthus
ENSPLAG00000008844	-	96	59.061	ENSAPOG00000011658	rpa1	87	71.111	Acanthochromis_polyacanthus
ENSPLAG00000008844	-	94	54.333	ENSAMEG00000007706	RPA1	91	54.333	Ailuropoda_melanoleuca
ENSPLAG00000008844	-	83	58.004	ENSACIG00000007277	rpa1	86	58.004	Amphilophus_citrinellus
ENSPLAG00000008844	-	93	74.368	ENSACIG00000012881	RPA1	94	74.368	Amphilophus_citrinellus
ENSPLAG00000008844	-	96	59.837	ENSAOCG00000023376	rpa1	94	59.837	Amphiprion_ocellaris
ENSPLAG00000008844	-	97	77.157	ENSAOCG00000009003	RPA1	95	77.157	Amphiprion_ocellaris
ENSPLAG00000008844	-	96	59.481	ENSAPEG00000008634	rpa1	94	59.481	Amphiprion_percula
ENSPLAG00000008844	-	97	77.971	ENSAPEG00000019132	RPA1	95	77.971	Amphiprion_percula
ENSPLAG00000008844	-	97	74.920	ENSATEG00000006443	RPA1	95	74.920	Anabas_testudineus
ENSPLAG00000008844	-	78	70.588	ENSATEG00000022024	rpa1	88	70.588	Anabas_testudineus
ENSPLAG00000008844	-	95	58.523	ENSAPLG00000012442	RPA1	86	58.523	Anas_platyrhynchos
ENSPLAG00000008844	-	84	58.392	ENSACAG00000014490	RPA1	94	50.080	Anolis_carolinensis
ENSPLAG00000008844	-	94	55.426	ENSANAG00000023456	RPA1	93	55.426	Aotus_nancymaae
ENSPLAG00000008844	-	91	60.585	ENSACLG00000006640	rpa1	94	60.585	Astatotilapia_calliptera
ENSPLAG00000008844	-	97	75.884	ENSACLG00000005223	RPA1	95	75.884	Astatotilapia_calliptera
ENSPLAG00000008844	-	97	57.767	ENSAMXG00000008418	rpa1	91	70.803	Astyanax_mexicanus
ENSPLAG00000008844	-	97	54.093	ENSBTAG00000009711	RPA1	94	54.093	Bos_taurus
ENSPLAG00000008844	-	97	53.623	ENSCJAG00000001848	RPA1	94	54.019	Callithrix_jacchus
ENSPLAG00000008844	-	97	53.451	ENSCAFG00000019249	RPA1	94	53.612	Canis_familiaris
ENSPLAG00000008844	-	97	53.451	ENSCAFG00020009847	RPA1	94	53.612	Canis_lupus_dingo
ENSPLAG00000008844	-	97	54.167	ENSCHIG00000026308	RPA1	94	54.213	Capra_hircus
ENSPLAG00000008844	-	97	53.945	ENSTSYG00000003482	-	94	53.945	Carlito_syrichta
ENSPLAG00000008844	-	97	53.772	ENSCPOG00000000035	RPA1	94	53.772	Cavia_porcellus
ENSPLAG00000008844	-	97	45.192	ENSCCAG00000010981	RPA1	94	45.600	Cebus_capucinus
ENSPLAG00000008844	-	97	50.806	ENSCLAG00000015045	-	94	50.806	Chinchilla_lanigera
ENSPLAG00000008844	-	97	54.428	ENSCLAG00000005185	-	95	54.428	Chinchilla_lanigera
ENSPLAG00000008844	-	97	43.910	ENSCSAG00000013833	RPA1	94	44.833	Chlorocebus_sabaeus
ENSPLAG00000008844	-	63	65.347	ENSCHOG00000009454	-	92	65.347	Choloepus_hoffmanni
ENSPLAG00000008844	-	93	54.132	ENSCHOG00000013540	-	94	54.132	Choloepus_hoffmanni
ENSPLAG00000008844	-	97	54.560	ENSCPBG00000020377	RPA1	94	55.250	Chrysemys_picta_bellii
ENSPLAG00000008844	-	96	40.843	ENSCING00000023482	-	93	40.843	Ciona_intestinalis
ENSPLAG00000008844	-	65	64.096	ENSCANG00000030911	RPA1	72	64.096	Colobus_angolensis_palliatus
ENSPLAG00000008844	-	97	54.267	ENSCGRG00001008197	Rpa1	95	54.267	Cricetulus_griseus_chok1gshd
ENSPLAG00000008844	-	73	58.811	ENSCGRG00000000582	Rpa1	92	58.811	Cricetulus_griseus_crigri
ENSPLAG00000008844	-	97	64.019	ENSCSEG00000012726	RPA1	94	64.019	Cynoglossus_semilaevis
ENSPLAG00000008844	-	96	58.049	ENSCSEG00000013066	rpa1	94	58.049	Cynoglossus_semilaevis
ENSPLAG00000008844	-	97	58.805	ENSCVAG00000019431	rpa1	94	60.243	Cyprinodon_variegatus
ENSPLAG00000008844	-	98	81.804	ENSCVAG00000013446	-	96	81.804	Cyprinodon_variegatus
ENSPLAG00000008844	-	97	59.547	ENSDARG00000003938	rpa1	94	59.547	Danio_rerio
ENSPLAG00000008844	-	96	54.472	ENSDNOG00000017218	RPA1	93	54.472	Dasypus_novemcinctus
ENSPLAG00000008844	-	97	54.647	ENSDORG00000006199	Rpa1	94	55.217	Dipodomys_ordii
ENSPLAG00000008844	-	96	36.276	FBgn0010173	RpA-70	93	36.262	Drosophila_melanogaster
ENSPLAG00000008844	-	81	61.538	ENSETEG00000017608	RPA1	77	61.538	Echinops_telfairi
ENSPLAG00000008844	-	94	55.241	ENSEASG00005009372	RPA1	91	64.619	Equus_asinus_asinus
ENSPLAG00000008844	-	97	54.226	ENSECAG00000023886	RPA1	94	54.386	Equus_caballus
ENSPLAG00000008844	-	60	64.767	ENSEEUG00000002186	-	63	64.767	Erinaceus_europaeus
ENSPLAG00000008844	-	97	59.289	ENSELUG00000021071	rpa1	94	59.289	Esox_lucius
ENSPLAG00000008844	-	60	71.948	ENSELUG00000006136	RPA1	91	71.948	Esox_lucius
ENSPLAG00000008844	-	97	54.575	ENSFCAG00000006306	RPA1	94	54.575	Felis_catus
ENSPLAG00000008844	-	97	53.376	ENSFALG00000006575	RPA1	94	53.376	Ficedula_albicollis
ENSPLAG00000008844	-	97	54.267	ENSFDAG00000007720	RPA1	95	54.267	Fukomys_damarensis
ENSPLAG00000008844	-	96	57.980	ENSFHEG00000003580	rpa1	94	57.980	Fundulus_heteroclitus
ENSPLAG00000008844	-	82	68.873	ENSGMOG00000010382	rpa1	91	68.873	Gadus_morhua
ENSPLAG00000008844	-	97	53.140	ENSGALG00000003072	RPA1	94	53.140	Gallus_gallus
ENSPLAG00000008844	-	97	93.569	ENSGAFG00000020953	RPA1	95	93.569	Gambusia_affinis
ENSPLAG00000008844	-	96	59.024	ENSGAFG00000012916	rpa1	94	59.024	Gambusia_affinis
ENSPLAG00000008844	-	97	56.656	ENSGACG00000010856	rpa1	94	56.656	Gasterosteus_aculeatus
ENSPLAG00000008844	-	97	54.400	ENSGAGG00000013611	RPA1	94	54.400	Gopherus_agassizii
ENSPLAG00000008844	-	64	64.792	ENSGGOG00000014186	RPA1	70	64.792	Gorilla_gorilla
ENSPLAG00000008844	-	93	61.008	ENSHBUG00000009348	RPA1	93	61.008	Haplochromis_burtoni
ENSPLAG00000008844	-	96	59.187	ENSHBUG00000017773	rpa1	94	59.187	Haplochromis_burtoni
ENSPLAG00000008844	-	97	54.428	ENSHGLG00000008846	RPA1	95	53.895	Heterocephalus_glaber_female
ENSPLAG00000008844	-	96	47.967	ENSHGLG00100002005	-	96	47.635	Heterocephalus_glaber_male
ENSPLAG00000008844	-	97	54.428	ENSHGLG00100017755	-	95	53.895	Heterocephalus_glaber_male
ENSPLAG00000008844	-	97	49.839	ENSHGLG00100000799	-	94	49.839	Heterocephalus_glaber_male
ENSPLAG00000008844	-	96	55.128	ENSHCOG00000001401	rpa1	94	55.751	Hippocampus_comes
ENSPLAG00000008844	-	97	46.400	ENSHCOG00000000351	RPA1	92	53.641	Hippocampus_comes
ENSPLAG00000008844	-	97	59.259	ENSIPUG00000004400	rpa1	94	59.259	Ictalurus_punctatus
ENSPLAG00000008844	-	89	54.514	ENSSTOG00000022475	RPA1	89	54.514	Ictidomys_tridecemlineatus
ENSPLAG00000008844	-	93	55.779	ENSJJAG00000000876	Rpa1	93	55.779	Jaculus_jaculus
ENSPLAG00000008844	-	96	57.374	ENSKMAG00000005605	rpa1	94	57.536	Kryptolebias_marmoratus
ENSPLAG00000008844	-	97	73.226	ENSKMAG00000000234	RPA1	95	73.226	Kryptolebias_marmoratus
ENSPLAG00000008844	-	96	58.279	ENSLBEG00000021604	rpa1	94	58.279	Labrus_bergylta
ENSPLAG00000008844	-	97	68.249	ENSLBEG00000002281	RPA1	95	67.953	Labrus_bergylta
ENSPLAG00000008844	-	70	56.264	ENSLACG00000007210	RPA1	92	56.264	Latimeria_chalumnae
ENSPLAG00000008844	-	97	58.039	ENSLOCG00000006397	rpa1	94	58.039	Lepisosteus_oculatus
ENSPLAG00000008844	-	97	52.181	ENSLAFG00000015354	RPA1	95	52.181	Loxodonta_africana
ENSPLAG00000008844	-	83	53.184	ENSMFAG00000036138	-	98	54.120	Macaca_fascicularis
ENSPLAG00000008844	-	96	53.094	ENSMMUG00000011604	-	94	53.958	Macaca_mulatta
ENSPLAG00000008844	-	97	49.920	ENSMMUG00000002442	-	94	49.920	Macaca_mulatta
ENSPLAG00000008844	-	81	56.733	ENSMNEG00000029837	-	94	56.733	Macaca_nemestrina
ENSPLAG00000008844	-	93	53.782	ENSMNEG00000031632	-	93	54.667	Macaca_nemestrina
ENSPLAG00000008844	-	94	51.920	ENSMLEG00000038768	-	93	51.833	Mandrillus_leucophaeus
ENSPLAG00000008844	-	97	75.312	ENSMAMG00000020097	RPA1	95	75.312	Mastacembelus_armatus
ENSPLAG00000008844	-	96	57.861	ENSMAMG00000017993	rpa1	90	69.630	Mastacembelus_armatus
ENSPLAG00000008844	-	97	75.884	ENSMZEG00005024731	RPA1	95	75.884	Maylandia_zebra
ENSPLAG00000008844	-	96	59.187	ENSMZEG00005007551	rpa1	94	59.483	Maylandia_zebra
ENSPLAG00000008844	-	96	53.420	ENSMGAG00000005315	RPA1	93	53.420	Meleagris_gallopavo
ENSPLAG00000008844	-	94	55.593	ENSMAUG00000010474	Rpa1	93	55.408	Mesocricetus_auratus
ENSPLAG00000008844	-	97	54.267	ENSMICG00000012867	RPA1	94	54.267	Microcebus_murinus
ENSPLAG00000008844	-	97	53.686	ENSMOCG00000013019	Rpa1	95	53.686	Microtus_ochrogaster
ENSPLAG00000008844	-	85	78.960	ENSMMOG00000010868	RPA1	92	78.960	Mola_mola
ENSPLAG00000008844	-	96	57.792	ENSMMOG00000014292	rpa1	94	59.296	Mola_mola
ENSPLAG00000008844	-	97	54.662	ENSMODG00000010549	RPA1	94	54.662	Monodelphis_domestica
ENSPLAG00000008844	-	96	59.187	ENSMALG00000011453	rpa1	95	60.000	Monopterus_albus
ENSPLAG00000008844	-	97	68.029	ENSMALG00000001208	RPA1	95	67.211	Monopterus_albus
ENSPLAG00000008844	-	97	54.662	MGP_CAROLIEiJ_G0016734	Rpa1	95	54.662	Mus_caroli
ENSPLAG00000008844	-	97	53.834	ENSMUSG00000000751	Rpa1	95	53.834	Mus_musculus
ENSPLAG00000008844	-	97	54.735	MGP_PahariEiJ_G0017871	Rpa1	95	54.735	Mus_pahari
ENSPLAG00000008844	-	97	53.748	MGP_SPRETEiJ_G0017577	Rpa1	95	53.748	Mus_spretus
ENSPLAG00000008844	-	97	53.784	ENSMPUG00000013119	RPA1	94	53.784	Mustela_putorius_furo
ENSPLAG00000008844	-	97	53.270	ENSMLUG00000006113	RPA1	95	53.110	Myotis_lucifugus
ENSPLAG00000008844	-	94	54.634	ENSNGAG00000004522	Rpa1	89	55.150	Nannospalax_galili
ENSPLAG00000008844	-	91	60.103	ENSNBRG00000020595	rpa1	93	60.103	Neolamprologus_brichardi
ENSPLAG00000008844	-	89	72.535	ENSNBRG00000009672	RPA1	86	72.007	Neolamprologus_brichardi
ENSPLAG00000008844	-	97	54.750	ENSNLEG00000017149	RPA1	94	54.589	Nomascus_leucogenys
ENSPLAG00000008844	-	94	48.000	ENSMEUG00000006714	RPA1	92	48.000	Notamacropus_eugenii
ENSPLAG00000008844	-	93	55.462	ENSODEG00000009038	RPA1	91	55.462	Octodon_degus
ENSPLAG00000008844	-	96	59.157	ENSONIG00000013135	rpa1	94	59.157	Oreochromis_niloticus
ENSPLAG00000008844	-	95	54.262	ENSOANG00000010880	RPA1	94	54.426	Ornithorhynchus_anatinus
ENSPLAG00000008844	-	97	52.492	ENSOCUG00000001504	RPA1	95	52.492	Oryctolagus_cuniculus
ENSPLAG00000008844	-	97	73.962	ENSORLG00000003368	RPA1	95	73.962	Oryzias_latipes
ENSPLAG00000008844	-	96	59.223	ENSORLG00000004856	rpa1	94	59.223	Oryzias_latipes
ENSPLAG00000008844	-	96	59.223	ENSORLG00020008980	rpa1	94	59.223	Oryzias_latipes_hni
ENSPLAG00000008844	-	97	72.571	ENSORLG00020015284	RPA1	95	72.727	Oryzias_latipes_hni
ENSPLAG00000008844	-	71	79.379	ENSORLG00015005867	-	100	79.379	Oryzias_latipes_hsok
ENSPLAG00000008844	-	96	59.223	ENSORLG00015013982	rpa1	94	59.223	Oryzias_latipes_hsok
ENSPLAG00000008844	-	97	74.038	ENSORLG00015020383	RPA1	95	74.038	Oryzias_latipes_hsok
ENSPLAG00000008844	-	97	71.910	ENSOMEG00000011040	RPA1	97	72.830	Oryzias_melastigma
ENSPLAG00000008844	-	96	57.605	ENSOMEG00000004704	rpa1	94	57.605	Oryzias_melastigma
ENSPLAG00000008844	-	73	67.808	ENSOGAG00000029379	-	91	67.808	Otolemur_garnettii
ENSPLAG00000008844	-	97	54.735	ENSOGAG00000005581	-	94	54.735	Otolemur_garnettii
ENSPLAG00000008844	-	97	54.006	ENSOARG00000014479	RPA1	94	54.054	Ovis_aries
ENSPLAG00000008844	-	97	54.750	ENSPPAG00000039680	RPA1	94	54.750	Pan_paniscus
ENSPLAG00000008844	-	97	54.575	ENSPPRG00000011807	RPA1	94	54.575	Panthera_pardus
ENSPLAG00000008844	-	97	54.254	ENSPTIG00000007898	RPA1	94	54.254	Panthera_tigris_altaica
ENSPLAG00000008844	-	97	54.750	ENSPTRG00000008539	RPA1	94	54.750	Pan_troglodytes
ENSPLAG00000008844	-	97	53.140	ENSPANG00000024592	RPA1	94	53.994	Papio_anubis
ENSPLAG00000008844	-	98	57.484	ENSPKIG00000008053	rpa1	95	58.439	Paramormyrops_kingsleyae
ENSPLAG00000008844	-	95	53.922	ENSPSIG00000015617	RPA1	94	53.922	Pelodiscus_sinensis
ENSPLAG00000008844	-	96	57.443	ENSPMGG00000011589	rpa1	94	57.443	Periophthalmus_magnuspinnatus
ENSPLAG00000008844	-	97	63.259	ENSPMGG00000000543	RPA1	94	67.888	Periophthalmus_magnuspinnatus
ENSPLAG00000008844	-	97	54.662	ENSPEMG00000021061	Rpa1	95	54.575	Peromyscus_maniculatus_bairdii
ENSPLAG00000008844	-	97	54.341	ENSPCIG00000019049	RPA1	94	54.502	Phascolarctos_cinereus
ENSPLAG00000008844	-	97	58.604	ENSPFOG00000003987	rpa1	94	58.604	Poecilia_formosa
ENSPLAG00000008844	-	97	58.604	ENSPMEG00000020602	rpa1	86	69.118	Poecilia_mexicana
ENSPLAG00000008844	-	100	97.331	ENSPMEG00000003627	-	99	97.331	Poecilia_mexicana
ENSPLAG00000008844	-	96	53.770	ENSPREG00000010174	rpa1	97	52.404	Poecilia_reticulata
ENSPLAG00000008844	-	97	92.056	ENSPREG00000010119	RPA1	99	92.056	Poecilia_reticulata
ENSPLAG00000008844	-	97	54.106	ENSPCOG00000001799	RPA1	94	54.106	Propithecus_coquereli
ENSPLAG00000008844	-	97	53.301	ENSPVAG00000002149	RPA1	94	53.301	Pteropus_vampyrus
ENSPLAG00000008844	-	96	59.350	ENSPNYG00000016316	rpa1	93	60.585	Pundamilia_nyererei
ENSPLAG00000008844	-	97	76.045	ENSPNYG00000024165	RPA1	95	76.045	Pundamilia_nyererei
ENSPLAG00000008844	-	97	50.645	ENSPNAG00000008599	rpa1	94	51.204	Pygocentrus_nattereri
ENSPLAG00000008844	-	94	61.364	ENSRNOG00000003123	Rpa1	95	55.233	Rattus_norvegicus
ENSPLAG00000008844	-	97	53.834	ENSRBIG00000036587	RPA1	94	53.834	Rhinopithecus_bieti
ENSPLAG00000008844	-	97	50.639	ENSRROG00000043278	RPA1	94	50.639	Rhinopithecus_roxellana
ENSPLAG00000008844	-	62	37.192	YAR007C	RFA1	65	37.192	Saccharomyces_cerevisiae
ENSPLAG00000008844	-	89	55.300	ENSSBOG00000030233	RPA1	91	55.732	Saimiri_boliviensis_boliviensis
ENSPLAG00000008844	-	94	55.980	ENSSHAG00000007969	RPA1	90	56.333	Sarcophilus_harrisii
ENSPLAG00000008844	-	97	60.514	ENSSFOG00015005362	rpa1	91	60.514	Scleropages_formosus
ENSPLAG00000008844	-	97	73.534	ENSSMAG00000019746	RPA1	95	73.851	Scophthalmus_maximus
ENSPLAG00000008844	-	96	59.547	ENSSDUG00000011949	rpa1	94	59.547	Seriola_dumerili
ENSPLAG00000008844	-	97	75.734	ENSSDUG00000016358	RPA1	95	76.043	Seriola_dumerili
ENSPLAG00000008844	-	96	59.223	ENSSLDG00000011806	rpa1	94	59.223	Seriola_lalandi_dorsalis
ENSPLAG00000008844	-	97	74.847	ENSSLDG00000020784	RPA1	95	75.153	Seriola_lalandi_dorsalis
ENSPLAG00000008844	-	83	50.375	ENSSARG00000007506	RPA1	82	50.375	Sorex_araneus
ENSPLAG00000008844	-	94	53.618	ENSSPUG00000007223	RPA1	93	53.618	Sphenodon_punctatus
ENSPLAG00000008844	-	96	58.862	ENSSPAG00000009903	rpa1	94	58.862	Stegastes_partitus
ENSPLAG00000008844	-	97	69.741	ENSSPAG00000011165	RPA1	93	71.593	Stegastes_partitus
ENSPLAG00000008844	-	86	64.865	ENSSSCG00000017822	RPA1	94	64.865	Sus_scrofa
ENSPLAG00000008844	-	97	53.226	ENSTGUG00000005775	RPA1	94	53.226	Taeniopygia_guttata
ENSPLAG00000008844	-	96	59.121	ENSTRUG00000003616	rpa1	94	59.121	Takifugu_rubripes
ENSPLAG00000008844	-	97	65.643	ENSTRUG00000000405	RPA1	95	65.497	Takifugu_rubripes
ENSPLAG00000008844	-	96	58.929	ENSTNIG00000016199	rpa1	94	58.929	Tetraodon_nigroviridis
ENSPLAG00000008844	-	64	65.111	ENSTBEG00000002709	RPA1	68	65.111	Tupaia_belangeri
ENSPLAG00000008844	-	97	52.979	ENSTTRG00000001169	RPA1	94	53.140	Tursiops_truncatus
ENSPLAG00000008844	-	89	65.385	ENSUAMG00000015676	RPA1	95	65.385	Ursus_americanus
ENSPLAG00000008844	-	87	63.814	ENSUMAG00000009328	RPA1	94	63.814	Ursus_maritimus
ENSPLAG00000008844	-	96	52.202	ENSVPAG00000009443	RPA1	93	52.202	Vicugna_pacos
ENSPLAG00000008844	-	97	53.612	ENSVVUG00000021715	RPA1	94	53.772	Vulpes_vulpes
ENSPLAG00000008844	-	96	55.412	ENSXETG00000013538	rpa1	93	56.260	Xenopus_tropicalis
ENSPLAG00000008844	-	92	82.852	ENSXCOG00000009899	-	94	82.683	Xiphophorus_couchianus
ENSPLAG00000008844	-	96	58.265	ENSXCOG00000010068	rpa1	95	58.265	Xiphophorus_couchianus
ENSPLAG00000008844	-	97	87.406	ENSXMAG00000010333	RPA1	95	87.406	Xiphophorus_maculatus
ENSPLAG00000008844	-	97	58.279	ENSXMAG00000004102	rpa1	94	58.783	Xiphophorus_maculatus