EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000009088 (Gene tree)
Gene ID: 106959144
Gene Symbol: zgc:56699
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3164 bases
Position: chrKQ546364.1:183026-186189
Accession: 106959144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000006838	zf-U11-48K	PF05253.12	2.3e-18	1	2
ENSPLAP00000006838	zf-U11-48K	PF05253.12	2.3e-18	2	2
ENSPLAP00000023593	zf-U11-48K	PF05253.12	3.1e-18	1	2
ENSPLAP00000023593	zf-U11-48K	PF05253.12	3.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000005551	-	519	-	ENSPLAP00000023593	172 (aa)	-	-
ENSPLAT00000005566	-	456	XM_015051508	ENSPLAP00000006838	151 (aa)	XP_014906994	-

Gene Model

Click here to download ENSPLAG00000009088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009088	zgc:56699	78	68.889	ENSAPOG00000000311	-	80	68.889	Acanthochromis_polyacanthus
ENSPLAG00000009088	zgc:56699	99	56.180	ENSAPOG00000021951	-	100	55.618	Acanthochromis_polyacanthus
ENSPLAG00000009088	zgc:56699	99	68.212	ENSACIG00000013400	zgc:56699	99	68.212	Amphilophus_citrinellus
ENSPLAG00000009088	zgc:56699	97	56.322	ENSAOCG00000013650	-	98	56.322	Amphiprion_ocellaris
ENSPLAG00000009088	zgc:56699	97	58.904	ENSAPEG00000006689	zgc:56699	97	58.904	Amphiprion_percula
ENSPLAG00000009088	zgc:56699	99	69.128	ENSATEG00000024058	zgc:56699	98	69.128	Anabas_testudineus
ENSPLAG00000009088	zgc:56699	99	61.326	ENSACLG00000023562	zgc:56699	92	61.326	Astatotilapia_calliptera
ENSPLAG00000009088	zgc:56699	85	48.447	ENSAMXG00000036095	-	61	48.649	Astyanax_mexicanus
ENSPLAG00000009088	zgc:56699	96	49.162	ENSAMXG00000038346	zgc:56699	98	48.588	Astyanax_mexicanus
ENSPLAG00000009088	zgc:56699	97	61.582	ENSCSEG00000021520	zgc:56699	83	60.795	Cynoglossus_semilaevis
ENSPLAG00000009088	zgc:56699	78	68.889	ENSCVAG00000009972	zgc:56699	74	68.889	Cyprinodon_variegatus
ENSPLAG00000009088	zgc:56699	85	45.283	ENSDARG00000099586	CR382383.2	82	46.575	Danio_rerio
ENSPLAG00000009088	zgc:56699	97	46.448	ENSDARG00000000887	zgc:56699	99	45.902	Danio_rerio
ENSPLAG00000009088	zgc:56699	62	45.045	ENSEBUG00000005577	-	60	44.144	Eptatretus_burgeri
ENSPLAG00000009088	zgc:56699	61	37.374	ENSEBUG00000005681	-	52	37.374	Eptatretus_burgeri
ENSPLAG00000009088	zgc:56699	97	51.111	ENSELUG00000003242	gtsf1	99	51.111	Esox_lucius
ENSPLAG00000009088	zgc:56699	99	77.333	ENSFHEG00000006036	zgc:56699	99	77.333	Fundulus_heteroclitus
ENSPLAG00000009088	zgc:56699	79	63.866	ENSGMOG00000007295	zgc:56699	98	63.866	Gadus_morhua
ENSPLAG00000009088	zgc:56699	59	42.857	ENSGALG00000035365	-	59	42.857	Gallus_gallus
ENSPLAG00000009088	zgc:56699	99	82.123	ENSGAFG00000020743	zgc:56699	100	82.123	Gambusia_affinis
ENSPLAG00000009088	zgc:56699	98	61.667	ENSHBUG00000005327	zgc:56699	100	61.667	Haplochromis_burtoni
ENSPLAG00000009088	zgc:56699	97	46.961	ENSHCOG00000010296	-	100	45.556	Hippocampus_comes
ENSPLAG00000009088	zgc:56699	97	45.763	ENSIPUG00000011498	zgc:56699	95	45.763	Ictalurus_punctatus
ENSPLAG00000009088	zgc:56699	96	68.276	ENSLBEG00000015981	zgc:56699	99	68.276	Labrus_bergylta
ENSPLAG00000009088	zgc:56699	77	46.479	ENSLOCG00000004469	zgc:56699	97	46.479	Lepisosteus_oculatus
ENSPLAG00000009088	zgc:56699	99	56.742	ENSMAMG00000001846	zgc:56699	99	56.742	Mastacembelus_armatus
ENSPLAG00000009088	zgc:56699	99	61.326	ENSMZEG00005026479	zgc:56699	92	61.326	Maylandia_zebra
ENSPLAG00000009088	zgc:56699	83	58.503	ENSMMOG00000017331	zgc:56699	79	58.503	Mola_mola
ENSPLAG00000009088	zgc:56699	98	61.111	ENSNBRG00000006336	zgc:56699	100	61.111	Neolamprologus_brichardi
ENSPLAG00000009088	zgc:56699	99	61.878	ENSONIG00000016720	zgc:56699	92	61.878	Oreochromis_niloticus
ENSPLAG00000009088	zgc:56699	56	38.384	ENSOANG00000030381	-	64	38.384	Ornithorhynchus_anatinus
ENSPLAG00000009088	zgc:56699	76	63.077	ENSORLG00000025877	-	85	51.449	Oryzias_latipes
ENSPLAG00000009088	zgc:56699	97	50.588	ENSORLG00000015258	-	97	50.000	Oryzias_latipes
ENSPLAG00000009088	zgc:56699	76	63.077	ENSORLG00020011013	-	85	51.449	Oryzias_latipes_hni
ENSPLAG00000009088	zgc:56699	97	50.000	ENSORLG00020010990	-	97	50.000	Oryzias_latipes_hni
ENSPLAG00000009088	zgc:56699	97	51.176	ENSORLG00015004961	zgc:56699	97	51.176	Oryzias_latipes_hsok
ENSPLAG00000009088	zgc:56699	75	55.752	ENSOMEG00000013200	-	81	55.118	Oryzias_melastigma
ENSPLAG00000009088	zgc:56699	97	50.292	ENSOMEG00000021739	-	97	50.292	Oryzias_melastigma
ENSPLAG00000009088	zgc:56699	95	56.395	ENSOMEG00000021773	-	96	55.814	Oryzias_melastigma
ENSPLAG00000009088	zgc:56699	97	46.328	ENSPKIG00000017039	zgc:56699	99	46.328	Paramormyrops_kingsleyae
ENSPLAG00000009088	zgc:56699	99	63.087	ENSPMGG00000023241	zgc:56699	99	63.087	Periophthalmus_magnuspinnatus
ENSPLAG00000009088	zgc:56699	59	52.809	ENSPMAG00000009653	-	91	44.915	Petromyzon_marinus
ENSPLAG00000009088	zgc:56699	50	40.000	ENSPCIG00000006734	-	94	40.000	Phascolarctos_cinereus
ENSPLAG00000009088	zgc:56699	99	87.151	ENSPFOG00000009204	zgc:56699	100	87.151	Poecilia_formosa
ENSPLAG00000009088	zgc:56699	99	87.151	ENSPMEG00000001443	zgc:56699	100	87.151	Poecilia_mexicana
ENSPLAG00000009088	zgc:56699	100	93.377	ENSPREG00000000745	zgc:56699	100	93.377	Poecilia_reticulata
ENSPLAG00000009088	zgc:56699	98	61.667	ENSPNYG00000002811	zgc:56699	100	61.667	Pundamilia_nyererei
ENSPLAG00000009088	zgc:56699	97	51.397	ENSPNAG00000005165	zgc:56699	99	51.397	Pygocentrus_nattereri
ENSPLAG00000009088	zgc:56699	94	49.412	ENSSFOG00015021600	zgc:56699	94	49.412	Scleropages_formosus
ENSPLAG00000009088	zgc:56699	95	58.235	ENSSMAG00000020886	zgc:56699	95	58.235	Scophthalmus_maximus
ENSPLAG00000009088	zgc:56699	98	68.919	ENSSDUG00000002033	zgc:56699	97	68.919	Seriola_dumerili
ENSPLAG00000009088	zgc:56699	98	68.243	ENSSLDG00000014113	zgc:56699	97	68.243	Seriola_lalandi_dorsalis
ENSPLAG00000009088	zgc:56699	78	59.712	ENSSPAG00000010005	-	89	58.273	Stegastes_partitus
ENSPLAG00000009088	zgc:56699	97	64.384	ENSSPAG00000019854	-	98	64.384	Stegastes_partitus
ENSPLAG00000009088	zgc:56699	95	55.233	ENSTRUG00000015537	zgc:56699	96	54.070	Takifugu_rubripes
ENSPLAG00000009088	zgc:56699	76	63.077	ENSTNIG00000012515	zgc:56699	93	61.739	Tetraodon_nigroviridis
ENSPLAG00000009088	zgc:56699	100	86.628	ENSXCOG00000014400	zgc:56699	90	86.628	Xiphophorus_couchianus
ENSPLAG00000009088	zgc:56699	99	81.564	ENSXMAG00000011692	zgc:56699	100	81.564	Xiphophorus_maculatus