EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000009243 (Gene tree)
Gene ID: 106952897
Gene Symbol: srsf6a
Alias: -
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7507 bases
Position: chrKQ545860.1:157457-164963
Accession: 106952897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000006924	RRM_1	PF00076.22	1.3e-31	1	2
ENSPLAP00000006924	RRM_1	PF00076.22	1.3e-31	2	2
ENSPLAP00000023601	RRM_1	PF00076.22	3.1e-31	1	2
ENSPLAP00000023601	RRM_1	PF00076.22	3.1e-31	2	2
ENSPLAP00000023620	RRM_1	PF00076.22	5.7e-30	1	2
ENSPLAP00000023620	RRM_1	PF00076.22	5.7e-30	2	2
ENSPLAP00000006863	RRM_1	PF00076.22	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000005538	-	480	-	ENSPLAP00000006863	159 (aa)	-	-
ENSPLAT00000005429	-	1068	-	ENSPLAP00000006924	355 (aa)	-	-
ENSPLAT00000005470	-	1047	-	ENSPLAP00000023620	348 (aa)	-	-
ENSPLAT00000005510	-	1044	XM_015041334	ENSPLAP00000023601	347 (aa)	XP_014896820	-

Gene Model

Click here to download ENSPLAG00000009243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000009243	srsf6a	79	37.405	ENSPLAG00000008416	srsf1b	79	40.102
ENSPLAG00000009243	srsf6a	79	38.168	ENSPLAG00000019553	-	81	45.062
ENSPLAG00000009243	srsf6a	80	73.438	ENSPLAG00000008812	srsf4	97	48.903
ENSPLAG00000009243	srsf6a	78	54.348	ENSPLAG00000006480	srsf5b	60	62.983
ENSPLAG00000009243	srsf6a	79	35.115	ENSPLAG00000022740	srsf9	72	41.379
ENSPLAG00000009243	srsf6a	82	54.412	ENSPLAG00000005508	srsf5a	58	60.638
ENSPLAG00000009243	srsf6a	78	38.462	ENSPLAG00000019613	-	64	45.062
ENSPLAG00000009243	srsf6a	53	42.529	ENSPLAG00000003715	srsf3b	62	44.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009243	srsf6a	80	82.677	ENSG00000124193	SRSF6	58	92.308	Homo_sapiens
ENSPLAG00000009243	srsf6a	85	84.507	ENSAPOG00000016635	-	84	88.971	Acanthochromis_polyacanthus
ENSPLAG00000009243	srsf6a	64	83.408	ENSAPOG00000000810	srsf6a	92	79.821	Acanthochromis_polyacanthus
ENSPLAG00000009243	srsf6a	80	56.250	ENSAMEG00000003710	SRSF6	87	53.918	Ailuropoda_melanoleuca
ENSPLAG00000009243	srsf6a	80	80.315	ENSACIG00000020091	-	95	80.000	Amphilophus_citrinellus
ENSPLAG00000009243	srsf6a	93	80.243	ENSACIG00000023658	-	91	79.394	Amphilophus_citrinellus
ENSPLAG00000009243	srsf6a	80	83.465	ENSAOCG00000004309	-	57	82.796	Amphiprion_ocellaris
ENSPLAG00000009243	srsf6a	64	86.099	ENSAOCG00000019410	-	91	86.161	Amphiprion_ocellaris
ENSPLAG00000009243	srsf6a	52	95.181	ENSAOCG00000019438	-	73	95.181	Amphiprion_ocellaris
ENSPLAG00000009243	srsf6a	79	94.444	ENSAPEG00000013086	-	94	74.074	Amphiprion_percula
ENSPLAG00000009243	srsf6a	80	80.153	ENSAPEG00000020746	-	96	57.485	Amphiprion_percula
ENSPLAG00000009243	srsf6a	80	81.102	ENSATEG00000007255	-	92	62.848	Anabas_testudineus
ENSPLAG00000009243	srsf6a	57	80.220	ENSAPLG00000014472	SRSF6	88	62.284	Anas_platyrhynchos
ENSPLAG00000009243	srsf6a	80	80.315	ENSACAG00000002061	SRSF6	86	64.465	Anolis_carolinensis
ENSPLAG00000009243	srsf6a	80	82.677	ENSANAG00000024080	SRSF6	100	57.219	Aotus_nancymaae
ENSPLAG00000009243	srsf6a	80	89.764	ENSAMXG00000042692	-	96	85.926	Astyanax_mexicanus
ENSPLAG00000009243	srsf6a	79	85.827	ENSAMXG00000003101	-	93	68.056	Astyanax_mexicanus
ENSPLAG00000009243	srsf6a	80	82.677	ENSBTAG00000008527	SRSF6	87	65.409	Bos_taurus
ENSPLAG00000009243	srsf6a	80	82.677	ENSCJAG00000048403	SRSF6	68	83.871	Callithrix_jacchus
ENSPLAG00000009243	srsf6a	80	82.677	ENSCAFG00000009289	SRSF6	58	93.590	Canis_familiaris
ENSPLAG00000009243	srsf6a	80	82.677	ENSCAFG00020013559	SRSF6	58	93.590	Canis_lupus_dingo
ENSPLAG00000009243	srsf6a	80	82.677	ENSCHIG00000015890	-	87	65.409	Capra_hircus
ENSPLAG00000009243	srsf6a	80	81.102	ENSCHIG00000009148	-	87	64.780	Capra_hircus
ENSPLAG00000009243	srsf6a	80	51.969	ENSTSYG00000026476	SRSF6	85	50.943	Carlito_syrichta
ENSPLAG00000009243	srsf6a	80	82.677	ENSCPOG00000011761	SRSF6	58	92.308	Cavia_porcellus
ENSPLAG00000009243	srsf6a	80	82.677	ENSCCAG00000026018	-	58	92.308	Cebus_capucinus
ENSPLAG00000009243	srsf6a	79	71.094	ENSCCAG00000018540	-	60	73.262	Cebus_capucinus
ENSPLAG00000009243	srsf6a	80	82.677	ENSCATG00000030794	SRSF6	58	92.308	Cercocebus_atys
ENSPLAG00000009243	srsf6a	80	82.677	ENSCLAG00000010247	SRSF6	88	64.780	Chinchilla_lanigera
ENSPLAG00000009243	srsf6a	80	82.677	ENSCSAG00000014022	SRSF6	87	63.208	Chlorocebus_sabaeus
ENSPLAG00000009243	srsf6a	80	84.252	ENSCPBG00000018200	SRSF6	89	64.350	Chrysemys_picta_bellii
ENSPLAG00000009243	srsf6a	80	81.890	ENSCANG00000037774	-	87	62.579	Colobus_angolensis_palliatus
ENSPLAG00000009243	srsf6a	80	82.677	ENSCGRG00001022339	Srsf6	88	63.208	Cricetulus_griseus_chok1gshd
ENSPLAG00000009243	srsf6a	80	79.528	ENSCSEG00000019778	SRSF6	90	80.769	Cynoglossus_semilaevis
ENSPLAG00000009243	srsf6a	64	77.333	ENSCSEG00000019782	SRSF6	91	62.946	Cynoglossus_semilaevis
ENSPLAG00000009243	srsf6a	80	86.614	ENSCVAG00000001863	SRSF6	95	87.692	Cyprinodon_variegatus
ENSPLAG00000009243	srsf6a	80	70.079	ENSDARG00000013729	srsf6a	91	51.567	Danio_rerio
ENSPLAG00000009243	srsf6a	80	85.938	ENSDARG00000016783	srsf6b	83	93.671	Danio_rerio
ENSPLAG00000009243	srsf6a	80	82.677	ENSDNOG00000008410	SRSF6	53	83.871	Dasypus_novemcinctus
ENSPLAG00000009243	srsf6a	80	82.677	ENSDORG00000028378	Srsf6	88	64.780	Dipodomys_ordii
ENSPLAG00000009243	srsf6a	84	75.188	ENSETEG00000006221	SRSF6	91	61.747	Echinops_telfairi
ENSPLAG00000009243	srsf6a	80	82.677	ENSEASG00005023429	SRSF6	87	62.928	Equus_asinus_asinus
ENSPLAG00000009243	srsf6a	80	82.677	ENSECAG00000023932	SRSF6	87	62.928	Equus_caballus
ENSPLAG00000009243	srsf6a	77	86.992	ENSELUG00000024182	SRSF6	90	86.992	Esox_lucius
ENSPLAG00000009243	srsf6a	80	86.614	ENSELUG00000013506	SRSF6	97	70.381	Esox_lucius
ENSPLAG00000009243	srsf6a	80	82.677	ENSFCAG00000032814	SRSF6	87	63.522	Felis_catus
ENSPLAG00000009243	srsf6a	80	51.969	ENSFDAG00000012191	SRSF6	86	50.314	Fukomys_damarensis
ENSPLAG00000009243	srsf6a	94	84.084	ENSFHEG00000023065	srsf6a	91	87.444	Fundulus_heteroclitus
ENSPLAG00000009243	srsf6a	84	70.677	ENSGMOG00000006105	srsf6a	62	73.653	Gadus_morhua
ENSPLAG00000009243	srsf6a	79	80.153	ENSGMOG00000014458	srsf6a	92	63.506	Gadus_morhua
ENSPLAG00000009243	srsf6a	80	82.031	ENSGALG00000000990	SRSF6	89	65.031	Gallus_gallus
ENSPLAG00000009243	srsf6a	71	98.374	ENSGAFG00000019087	srsf6a	100	98.374	Gambusia_affinis
ENSPLAG00000009243	srsf6a	81	97.656	ENSGAFG00000019088	-	74	97.656	Gambusia_affinis
ENSPLAG00000009243	srsf6a	80	88.976	ENSGACG00000006084	srsf6a	95	72.500	Gasterosteus_aculeatus
ENSPLAG00000009243	srsf6a	80	84.252	ENSGAGG00000003238	SRSF6	89	64.350	Gopherus_agassizii
ENSPLAG00000009243	srsf6a	80	82.677	ENSGGOG00000009808	SRSF6	58	92.308	Gorilla_gorilla
ENSPLAG00000009243	srsf6a	79	79.365	ENSHBUG00000006386	-	98	59.587	Haplochromis_burtoni
ENSPLAG00000009243	srsf6a	80	82.677	ENSHGLG00000007348	SRSF6	88	64.780	Heterocephalus_glaber_female
ENSPLAG00000009243	srsf6a	79	60.317	ENSHGLG00000007701	-	91	50.157	Heterocephalus_glaber_female
ENSPLAG00000009243	srsf6a	80	51.969	ENSHGLG00100005043	SRSF6	86	50.314	Heterocephalus_glaber_male
ENSPLAG00000009243	srsf6a	80	84.252	ENSHCOG00000002740	srsf6a	94	70.270	Hippocampus_comes
ENSPLAG00000009243	srsf6a	80	84.252	ENSIPUG00000004776	-	89	87.634	Ictalurus_punctatus
ENSPLAG00000009243	srsf6a	73	79.310	ENSIPUG00000016856	SRSF6	93	66.767	Ictalurus_punctatus
ENSPLAG00000009243	srsf6a	80	82.677	ENSSTOG00000010866	SRSF6	58	92.308	Ictidomys_tridecemlineatus
ENSPLAG00000009243	srsf6a	92	81.967	ENSKMAG00000011934	srsf6a	91	89.732	Kryptolebias_marmoratus
ENSPLAG00000009243	srsf6a	79	90.476	ENSLBEG00000007356	srsf6a	95	70.725	Labrus_bergylta
ENSPLAG00000009243	srsf6a	79	84.496	ENSLACG00000005466	SRSF6	88	65.938	Latimeria_chalumnae
ENSPLAG00000009243	srsf6a	80	82.677	ENSMFAG00000036925	SRSF6	58	92.308	Macaca_fascicularis
ENSPLAG00000009243	srsf6a	80	82.677	ENSMMUG00000006742	SRSF6	58	92.308	Macaca_mulatta
ENSPLAG00000009243	srsf6a	80	81.890	ENSMNEG00000038270	-	87	62.893	Macaca_nemestrina
ENSPLAG00000009243	srsf6a	80	81.890	ENSMNEG00000027392	-	87	62.893	Macaca_nemestrina
ENSPLAG00000009243	srsf6a	79	96.032	ENSMAMG00000017161	srsf6a	94	81.361	Mastacembelus_armatus
ENSPLAG00000009243	srsf6a	60	81.250	ENSMAMG00000023477	-	82	92.105	Mastacembelus_armatus
ENSPLAG00000009243	srsf6a	80	78.740	ENSMZEG00005008032	-	98	62.722	Maylandia_zebra
ENSPLAG00000009243	srsf6a	80	80.315	ENSMZEG00005020658	-	97	64.264	Maylandia_zebra
ENSPLAG00000009243	srsf6a	52	89.157	ENSMAUG00000019086	-	58	92.308	Mesocricetus_auratus
ENSPLAG00000009243	srsf6a	80	82.677	ENSMICG00000008537	SRSF6	58	92.308	Microcebus_murinus
ENSPLAG00000009243	srsf6a	60	94.737	ENSMMOG00000015241	-	89	94.737	Mola_mola
ENSPLAG00000009243	srsf6a	80	81.890	ENSMODG00000003107	SRSF6	88	64.506	Monodelphis_domestica
ENSPLAG00000009243	srsf6a	100	82.011	ENSMALG00000003702	srsf6a	100	82.011	Monopterus_albus
ENSPLAG00000009243	srsf6a	80	82.677	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSPLAG00000009243	srsf6a	80	82.677	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSPLAG00000009243	srsf6a	80	82.677	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSPLAG00000009243	srsf6a	80	82.677	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSPLAG00000009243	srsf6a	80	82.677	ENSMPUG00000017692	SRSF6	64	83.871	Mustela_putorius_furo
ENSPLAG00000009243	srsf6a	79	46.405	ENSMLUG00000016618	SRSF6	91	48.189	Myotis_lucifugus
ENSPLAG00000009243	srsf6a	80	82.677	ENSNGAG00000017560	Srsf6	90	63.009	Nannospalax_galili
ENSPLAG00000009243	srsf6a	80	78.740	ENSNBRG00000014709	-	98	59.882	Neolamprologus_brichardi
ENSPLAG00000009243	srsf6a	79	95.238	ENSNBRG00000001846	-	100	71.622	Neolamprologus_brichardi
ENSPLAG00000009243	srsf6a	80	82.677	ENSNLEG00000006524	SRSF6	58	92.308	Nomascus_leucogenys
ENSPLAG00000009243	srsf6a	80	81.890	ENSMEUG00000014615	SRSF6	98	65.409	Notamacropus_eugenii
ENSPLAG00000009243	srsf6a	52	89.157	ENSODEG00000016510	-	58	92.308	Octodon_degus
ENSPLAG00000009243	srsf6a	79	79.528	ENSONIG00000020247	-	98	63.818	Oreochromis_niloticus
ENSPLAG00000009243	srsf6a	80	93.701	ENSONIG00000001925	-	88	78.078	Oreochromis_niloticus
ENSPLAG00000009243	srsf6a	82	43.511	ENSOCUG00000023999	-	70	57.233	Oryctolagus_cuniculus
ENSPLAG00000009243	srsf6a	80	57.037	ENSOCUG00000009785	-	98	56.090	Oryctolagus_cuniculus
ENSPLAG00000009243	srsf6a	79	81.600	ENSORLG00020017506	srsf6a	91	68.125	Oryzias_latipes_hni
ENSPLAG00000009243	srsf6a	79	68.254	ENSOMEG00000006001	srsf6a	94	56.461	Oryzias_melastigma
ENSPLAG00000009243	srsf6a	80	82.677	ENSOGAG00000014468	SRSF6	53	83.333	Otolemur_garnettii
ENSPLAG00000009243	srsf6a	80	76.378	ENSOARG00000003117	SRSF6	87	63.522	Ovis_aries
ENSPLAG00000009243	srsf6a	80	69.291	ENSPPAG00000043131	-	57	69.892	Pan_paniscus
ENSPLAG00000009243	srsf6a	80	81.890	ENSPPAG00000034327	-	87	62.893	Pan_paniscus
ENSPLAG00000009243	srsf6a	80	82.677	ENSPPRG00000008917	SRSF6	87	63.522	Panthera_pardus
ENSPLAG00000009243	srsf6a	80	69.291	ENSPTRG00000046274	-	57	69.892	Pan_troglodytes
ENSPLAG00000009243	srsf6a	80	82.677	ENSPTRG00000044686	-	58	92.308	Pan_troglodytes
ENSPLAG00000009243	srsf6a	80	82.677	ENSPANG00000035224	SRSF6	58	92.308	Papio_anubis
ENSPLAG00000009243	srsf6a	78	70.079	ENSPKIG00000015703	-	95	61.842	Paramormyrops_kingsleyae
ENSPLAG00000009243	srsf6a	93	89.247	ENSPKIG00000018463	-	78	94.937	Paramormyrops_kingsleyae
ENSPLAG00000009243	srsf6a	80	85.827	ENSPKIG00000015603	-	88	86.923	Paramormyrops_kingsleyae
ENSPLAG00000009243	srsf6a	79	96.032	ENSPMGG00000014963	srsf6a	71	81.967	Periophthalmus_magnuspinnatus
ENSPLAG00000009243	srsf6a	80	81.890	ENSPCIG00000003820	SRSF6	58	94.872	Phascolarctos_cinereus
ENSPLAG00000009243	srsf6a	99	96.414	ENSPFOG00000006437	srsf6a	97	96.414	Poecilia_formosa
ENSPLAG00000009243	srsf6a	63	90.583	ENSPMEG00000006056	SRSF6	100	90.583	Poecilia_mexicana
ENSPLAG00000009243	srsf6a	94	89.790	ENSPMEG00000006042	SRSF6	94	90.390	Poecilia_mexicana
ENSPLAG00000009243	srsf6a	79	100.000	ENSPREG00000001040	srsf6a	87	100.000	Poecilia_reticulata
ENSPLAG00000009243	srsf6a	80	82.677	ENSPPYG00000011019	SRSF6	87	63.208	Pongo_abelii
ENSPLAG00000009243	srsf6a	80	82.677	ENSPCAG00000010954	SRSF6	55	83.333	Procavia_capensis
ENSPLAG00000009243	srsf6a	80	82.677	ENSPCOG00000026364	SRSF6	58	92.308	Propithecus_coquereli
ENSPLAG00000009243	srsf6a	80	84.252	ENSPVAG00000015232	SRSF6	91	63.554	Pteropus_vampyrus
ENSPLAG00000009243	srsf6a	80	78.740	ENSPNYG00000004944	-	98	59.882	Pundamilia_nyererei
ENSPLAG00000009243	srsf6a	79	95.238	ENSPNYG00000011272	-	90	78.571	Pundamilia_nyererei
ENSPLAG00000009243	srsf6a	80	83.465	ENSPNAG00000023179	-	94	82.308	Pygocentrus_nattereri
ENSPLAG00000009243	srsf6a	80	82.677	ENSRNOG00000006380	Srsf6	54	83.871	Rattus_norvegicus
ENSPLAG00000009243	srsf6a	80	80.315	ENSRBIG00000041414	SRSF6	60	92.308	Rhinopithecus_bieti
ENSPLAG00000009243	srsf6a	80	82.677	ENSRROG00000029989	SRSF6	58	92.308	Rhinopithecus_roxellana
ENSPLAG00000009243	srsf6a	80	82.677	ENSSBOG00000033708	-	58	92.308	Saimiri_boliviensis_boliviensis
ENSPLAG00000009243	srsf6a	80	63.780	ENSSBOG00000034078	-	54	67.935	Saimiri_boliviensis_boliviensis
ENSPLAG00000009243	srsf6a	80	82.677	ENSSHAG00000012805	SRSF6	88	64.815	Sarcophilus_harrisii
ENSPLAG00000009243	srsf6a	80	83.465	ENSSFOG00015015169	SRSF6	59	88.172	Scleropages_formosus
ENSPLAG00000009243	srsf6a	79	81.343	ENSSFOG00015019681	-	92	64.451	Scleropages_formosus
ENSPLAG00000009243	srsf6a	55	91.262	ENSSMAG00000014819	-	83	68.354	Scophthalmus_maximus
ENSPLAG00000009243	srsf6a	79	75.397	ENSSMAG00000017447	-	55	78.919	Scophthalmus_maximus
ENSPLAG00000009243	srsf6a	50	96.250	ENSSMAG00000014861	-	59	97.468	Scophthalmus_maximus
ENSPLAG00000009243	srsf6a	60	82.105	ENSSDUG00000011036	-	83	92.105	Seriola_dumerili
ENSPLAG00000009243	srsf6a	79	96.032	ENSSDUG00000016097	srsf6a	94	82.440	Seriola_dumerili
ENSPLAG00000009243	srsf6a	60	82.105	ENSSLDG00000014858	-	83	92.105	Seriola_lalandi_dorsalis
ENSPLAG00000009243	srsf6a	79	96.032	ENSSLDG00000022841	srsf6a	94	82.822	Seriola_lalandi_dorsalis
ENSPLAG00000009243	srsf6a	80	81.890	ENSSPUG00000004967	SRSF6	89	65.846	Sphenodon_punctatus
ENSPLAG00000009243	srsf6a	79	96.032	ENSSPAG00000002362	srsf6a	86	92.553	Stegastes_partitus
ENSPLAG00000009243	srsf6a	60	80.208	ENSSPAG00000021913	-	79	90.789	Stegastes_partitus
ENSPLAG00000009243	srsf6a	80	82.677	ENSSSCG00000007362	SRSF6	96	66.230	Sus_scrofa
ENSPLAG00000009243	srsf6a	80	82.677	ENSTGUG00000003455	SRSF6	89	64.923	Taeniopygia_guttata
ENSPLAG00000009243	srsf6a	50	97.500	ENSTRUG00000021397	-	87	97.500	Takifugu_rubripes
ENSPLAG00000009243	srsf6a	79	89.683	ENSTNIG00000001692	srsf6a	95	72.973	Tetraodon_nigroviridis
ENSPLAG00000009243	srsf6a	80	82.677	ENSUAMG00000003559	SRSF6	58	93.590	Ursus_americanus
ENSPLAG00000009243	srsf6a	52	59.036	ENSVVUG00000019276	-	55	60.256	Vulpes_vulpes
ENSPLAG00000009243	srsf6a	100	92.394	ENSXMAG00000021849	srsf6a	100	97.967	Xiphophorus_maculatus