EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000009294 (Gene tree)
Gene ID: 106961097
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 34644 bases
Position: chrKQ546579.1:114328-148971
Accession: 106961097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007044	RRM_1	PF00076.22	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000005221	-	8881	XM_015054611	ENSPLAP00000007044	2163 (aa)	XP_014910097	UPI00072EEADF

Gene Model

Click here to download ENSPLAG00000009294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000009294	setd1a	57	65.714	ENSPLAG00000023459	setd1ba	53	65.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009294	setd1a	82	95.522	ENSAPOG00000018002	setd1a	79	93.365	Acanthochromis_polyacanthus
ENSPLAG00000009294	setd1a	76	91.875	ENSACIG00000007144	setd1a	99	92.163	Amphilophus_citrinellus
ENSPLAG00000009294	setd1a	100	80.242	ENSAOCG00000003663	setd1a	100	80.458	Amphiprion_ocellaris
ENSPLAG00000009294	setd1a	100	76.370	ENSATEG00000022798	setd1a	100	76.774	Anabas_testudineus
ENSPLAG00000009294	setd1a	100	78.914	ENSACLG00000024747	setd1a	100	80.045	Astatotilapia_calliptera
ENSPLAG00000009294	setd1a	100	75.621	ENSCSEG00000021605	setd1a	100	73.791	Cynoglossus_semilaevis
ENSPLAG00000009294	setd1a	89	83.714	ENSFHEG00000023258	setd1a	97	90.625	Fundulus_heteroclitus
ENSPLAG00000009294	setd1a	60	95.935	ENSGAFG00000011698	setd1a	86	97.959	Gambusia_affinis
ENSPLAG00000009294	setd1a	53	84.110	ENSGACG00000013688	setd1a	73	85.792	Gasterosteus_aculeatus
ENSPLAG00000009294	setd1a	100	79.412	ENSHBUG00000008893	setd1a	100	80.371	Haplochromis_burtoni
ENSPLAG00000009294	setd1a	77	85.795	ENSHCOG00000003119	setd1a	99	86.494	Hippocampus_comes
ENSPLAG00000009294	setd1a	100	79.261	ENSKMAG00000009484	setd1a	100	80.207	Kryptolebias_marmoratus
ENSPLAG00000009294	setd1a	100	74.406	ENSLBEG00000004399	setd1a	100	75.045	Labrus_bergylta
ENSPLAG00000009294	setd1a	72	90.661	ENSMAMG00000021851	setd1a	97	90.661	Mastacembelus_armatus
ENSPLAG00000009294	setd1a	100	78.869	ENSMZEG00005023141	setd1a	100	78.959	Maylandia_zebra
ENSPLAG00000009294	setd1a	72	92.550	ENSMMOG00000016992	setd1a	97	93.333	Mola_mola
ENSPLAG00000009294	setd1a	99	69.877	ENSMALG00000007401	setd1a	98	72.038	Monopterus_albus
ENSPLAG00000009294	setd1a	52	82.095	MGP_CAROLIEiJ_G0030519	-	100	72.081	Mus_caroli
ENSPLAG00000009294	setd1a	55	82.095	ENSMUSG00000042308	Setd1a	100	72.081	Mus_musculus
ENSPLAG00000009294	setd1a	54	82.095	MGP_PahariEiJ_G0013726	-	100	72.081	Mus_pahari
ENSPLAG00000009294	setd1a	55	82.095	MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	Mus_spretus
ENSPLAG00000009294	setd1a	74	75.382	ENSNBRG00000004760	setd1a	100	76.947	Neolamprologus_brichardi
ENSPLAG00000009294	setd1a	51	81.849	ENSMEUG00000003396	-	58	78.378	Notamacropus_eugenii
ENSPLAG00000009294	setd1a	100	75.419	ENSORLG00000002213	setd1a	100	76.550	Oryzias_latipes
ENSPLAG00000009294	setd1a	100	75.475	ENSORLG00020011897	setd1a	100	76.641	Oryzias_latipes_hni
ENSPLAG00000009294	setd1a	100	75.906	ENSORLG00015004826	setd1a	100	76.982	Oryzias_latipes_hsok
ENSPLAG00000009294	setd1a	100	75.376	ENSOMEG00000019732	setd1a	100	76.874	Oryzias_melastigma
ENSPLAG00000009294	setd1a	50	77.955	ENSPSIG00000005027	-	68	78.302	Pelodiscus_sinensis
ENSPLAG00000009294	setd1a	100	97.413	ENSPFOG00000013669	setd1a	100	97.413	Poecilia_formosa
ENSPLAG00000009294	setd1a	100	98.523	ENSPMEG00000005864	setd1a	100	98.523	Poecilia_mexicana
ENSPLAG00000009294	setd1a	100	97.277	ENSPREG00000010201	setd1a	100	97.277	Poecilia_reticulata
ENSPLAG00000009294	setd1a	100	79.284	ENSPNYG00000014139	setd1a	100	80.072	Pundamilia_nyererei
ENSPLAG00000009294	setd1a	100	59.358	ENSPNAG00000019165	setd1a	100	59.000	Pygocentrus_nattereri
ENSPLAG00000009294	setd1a	100	76.599	ENSSMAG00000008846	setd1a	100	76.313	Scophthalmus_maximus
ENSPLAG00000009294	setd1a	100	79.416	ENSSDUG00000022142	setd1a	100	79.290	Seriola_dumerili
ENSPLAG00000009294	setd1a	100	79.461	ENSSLDG00000018250	setd1a	100	79.335	Seriola_lalandi_dorsalis
ENSPLAG00000009294	setd1a	100	79.973	ENSSPAG00000007822	setd1a	100	80.738	Stegastes_partitus
ENSPLAG00000009294	setd1a	78	81.702	ENSTRUG00000008953	setd1a	92	81.435	Takifugu_rubripes
ENSPLAG00000009294	setd1a	78	88.830	ENSTNIG00000014930	setd1a	85	76.638	Tetraodon_nigroviridis
ENSPLAG00000009294	setd1a	95	92.629	ENSXCOG00000017585	setd1a	97	93.954	Xiphophorus_couchianus
ENSPLAG00000009294	setd1a	100	96.499	ENSXMAG00000008021	setd1a	100	96.499	Xiphophorus_maculatus