EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000009456 (Gene tree)
Gene ID: 106950348
Gene Symbol: cstf3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 15150 bases
Position: chrKQ545711.1:174298-189447
Accession: 106950348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007120	Suf	PF05843.14	9.3e-84	1	1
ENSPLAP00000007136	Suf	PF05843.14	1.2e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000005085	-	2771	XM_015037132	ENSPLAP00000007136	716 (aa)	XP_014892618	UPI00072DC91F
ENSPLAT00000005098	-	2151	-	ENSPLAP00000007120	716 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000009456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009456	cstf3	100	90.808	ENSG00000176102	CSTF3	100	90.808	Homo_sapiens
ENSPLAG00000009456	cstf3	100	97.486	ENSAPOG00000014054	cstf3	100	97.486	Acanthochromis_polyacanthus
ENSPLAG00000009456	cstf3	99	91.243	ENSAMEG00000007187	CSTF3	98	91.243	Ailuropoda_melanoleuca
ENSPLAG00000009456	cstf3	87	92.135	ENSACIG00000005539	cstf3	100	92.135	Amphilophus_citrinellus
ENSPLAG00000009456	cstf3	100	97.346	ENSAOCG00000010930	cstf3	100	97.346	Amphiprion_ocellaris
ENSPLAG00000009456	cstf3	100	97.346	ENSAPEG00000007903	cstf3	100	97.346	Amphiprion_percula
ENSPLAG00000009456	cstf3	100	97.207	ENSATEG00000000190	cstf3	100	97.207	Anabas_testudineus
ENSPLAG00000009456	cstf3	99	91.384	ENSAPLG00000007217	CSTF3	100	91.384	Anas_platyrhynchos
ENSPLAG00000009456	cstf3	100	91.226	ENSACAG00000002823	CSTF3	100	91.226	Anolis_carolinensis
ENSPLAG00000009456	cstf3	100	90.808	ENSANAG00000020699	CSTF3	100	90.880	Aotus_nancymaae
ENSPLAG00000009456	cstf3	100	97.067	ENSACLG00000007820	cstf3	100	97.067	Astatotilapia_calliptera
ENSPLAG00000009456	cstf3	100	92.061	ENSAMXG00000014198	cstf3	100	92.479	Astyanax_mexicanus
ENSPLAG00000009456	cstf3	100	90.808	ENSBTAG00000008617	CSTF3	100	91.098	Bos_taurus
ENSPLAG00000009456	cstf3	97	47.619	WBGene00006307	suf-1	99	47.619	Caenorhabditis_elegans
ENSPLAG00000009456	cstf3	100	90.808	ENSCJAG00000005533	CSTF3	100	90.880	Callithrix_jacchus
ENSPLAG00000009456	cstf3	100	90.808	ENSCAFG00000007264	CSTF3	100	90.808	Canis_familiaris
ENSPLAG00000009456	cstf3	99	91.384	ENSCAFG00020002715	CSTF3	98	91.384	Canis_lupus_dingo
ENSPLAG00000009456	cstf3	98	89.900	ENSCHIG00000016418	CSTF3	100	90.880	Capra_hircus
ENSPLAG00000009456	cstf3	99	91.667	ENSTSYG00000000451	CSTF3	99	96.214	Carlito_syrichta
ENSPLAG00000009456	cstf3	83	88.389	ENSCAPG00000010958	CSTF3	98	88.389	Cavia_aperea
ENSPLAG00000009456	cstf3	100	90.947	ENSCPOG00000005545	CSTF3	100	90.947	Cavia_porcellus
ENSPLAG00000009456	cstf3	100	90.808	ENSCCAG00000024790	CSTF3	96	96.214	Cebus_capucinus
ENSPLAG00000009456	cstf3	100	90.808	ENSCATG00000007080	CSTF3	100	90.880	Cercocebus_atys
ENSPLAG00000009456	cstf3	100	90.808	ENSCLAG00000016179	CSTF3	100	90.808	Chinchilla_lanigera
ENSPLAG00000009456	cstf3	78	96.617	ENSCHOG00000002497	CSTF3	79	96.617	Choloepus_hoffmanni
ENSPLAG00000009456	cstf3	100	90.808	ENSCPBG00000006753	CSTF3	100	90.808	Chrysemys_picta_bellii
ENSPLAG00000009456	cstf3	99	61.859	ENSCING00000006401	-	99	61.997	Ciona_intestinalis
ENSPLAG00000009456	cstf3	98	61.603	ENSCSAVG00000004851	-	100	61.603	Ciona_savignyi
ENSPLAG00000009456	cstf3	100	90.808	ENSCANG00000035468	CSTF3	100	90.880	Colobus_angolensis_palliatus
ENSPLAG00000009456	cstf3	100	90.669	ENSCGRG00001014773	Cstf3	100	90.669	Cricetulus_griseus_chok1gshd
ENSPLAG00000009456	cstf3	100	90.669	ENSCGRG00000004142	Cstf3	100	90.669	Cricetulus_griseus_crigri
ENSPLAG00000009456	cstf3	100	95.950	ENSCSEG00000014283	cstf3	100	95.950	Cynoglossus_semilaevis
ENSPLAG00000009456	cstf3	100	98.603	ENSCVAG00000019739	cstf3	100	98.603	Cyprinodon_variegatus
ENSPLAG00000009456	cstf3	100	93.724	ENSDARG00000018904	cstf3	100	93.724	Danio_rerio
ENSPLAG00000009456	cstf3	99	91.049	ENSDNOG00000007366	CSTF3	99	91.049	Dasypus_novemcinctus
ENSPLAG00000009456	cstf3	99	84.344	ENSDORG00000005898	Cstf3	99	84.344	Dipodomys_ordii
ENSPLAG00000009456	cstf3	99	56.088	FBgn0003559	su(f)	99	56.088	Drosophila_melanogaster
ENSPLAG00000009456	cstf3	89	85.670	ENSETEG00000017097	CSTF3	90	85.670	Echinops_telfairi
ENSPLAG00000009456	cstf3	84	73.798	ENSEBUG00000015459	cstf3	96	73.798	Eptatretus_burgeri
ENSPLAG00000009456	cstf3	99	90.254	ENSEASG00005019884	CSTF3	96	96.214	Equus_asinus_asinus
ENSPLAG00000009456	cstf3	99	90.254	ENSECAG00000023338	CSTF3	96	96.214	Equus_caballus
ENSPLAG00000009456	cstf3	100	85.933	ENSEEUG00000015167	CSTF3	100	85.933	Erinaceus_europaeus
ENSPLAG00000009456	cstf3	100	94.282	ENSELUG00000023393	cstf3	100	94.282	Esox_lucius
ENSPLAG00000009456	cstf3	100	90.947	ENSFCAG00000030711	CSTF3	100	90.947	Felis_catus
ENSPLAG00000009456	cstf3	93	93.373	ENSFALG00000010764	CSTF3	100	90.323	Ficedula_albicollis
ENSPLAG00000009456	cstf3	100	90.947	ENSFDAG00000012082	CSTF3	100	90.947	Fukomys_damarensis
ENSPLAG00000009456	cstf3	100	98.743	ENSFHEG00000020623	cstf3	100	98.743	Fundulus_heteroclitus
ENSPLAG00000009456	cstf3	100	93.454	ENSGMOG00000012275	cstf3	100	93.454	Gadus_morhua
ENSPLAG00000009456	cstf3	100	90.669	ENSGALG00000011685	CSTF3	100	90.669	Gallus_gallus
ENSPLAG00000009456	cstf3	100	99.302	ENSGAFG00000002181	cstf3	100	99.302	Gambusia_affinis
ENSPLAG00000009456	cstf3	100	95.950	ENSGACG00000015997	cstf3	100	95.950	Gasterosteus_aculeatus
ENSPLAG00000009456	cstf3	100	90.808	ENSGAGG00000006200	CSTF3	100	90.808	Gopherus_agassizii
ENSPLAG00000009456	cstf3	99	85.593	ENSGGOG00000026591	CSTF3	96	91.314	Gorilla_gorilla
ENSPLAG00000009456	cstf3	100	97.207	ENSHBUG00000016656	cstf3	100	97.207	Haplochromis_burtoni
ENSPLAG00000009456	cstf3	100	90.808	ENSHGLG00000017834	CSTF3	100	90.808	Heterocephalus_glaber_female
ENSPLAG00000009456	cstf3	100	90.808	ENSHGLG00100018042	CSTF3	100	90.808	Heterocephalus_glaber_male
ENSPLAG00000009456	cstf3	100	93.017	ENSHCOG00000015218	cstf3	100	93.017	Hippocampus_comes
ENSPLAG00000009456	cstf3	100	92.748	ENSIPUG00000013170	CSTF3	100	92.748	Ictalurus_punctatus
ENSPLAG00000009456	cstf3	100	90.808	ENSSTOG00000013306	CSTF3	100	90.808	Ictidomys_tridecemlineatus
ENSPLAG00000009456	cstf3	99	81.215	ENSJJAG00000018430	Cstf3	98	81.215	Jaculus_jaculus
ENSPLAG00000009456	cstf3	100	94.972	ENSKMAG00000010916	cstf3	100	94.972	Kryptolebias_marmoratus
ENSPLAG00000009456	cstf3	100	95.810	ENSLBEG00000002306	cstf3	100	95.810	Labrus_bergylta
ENSPLAG00000009456	cstf3	100	89.819	ENSLACG00000017296	CSTF3	100	89.819	Latimeria_chalumnae
ENSPLAG00000009456	cstf3	100	93.872	ENSLOCG00000004415	cstf3	100	93.872	Lepisosteus_oculatus
ENSPLAG00000009456	cstf3	100	90.669	ENSLAFG00000008712	CSTF3	100	90.669	Loxodonta_africana
ENSPLAG00000009456	cstf3	100	90.808	ENSMFAG00000029516	CSTF3	100	90.880	Macaca_fascicularis
ENSPLAG00000009456	cstf3	100	90.808	ENSMMUG00000002542	CSTF3	100	90.808	Macaca_mulatta
ENSPLAG00000009456	cstf3	100	90.808	ENSMNEG00000021807	CSTF3	100	90.880	Macaca_nemestrina
ENSPLAG00000009456	cstf3	100	90.808	ENSMLEG00000039594	CSTF3	97	94.655	Mandrillus_leucophaeus
ENSPLAG00000009456	cstf3	100	96.788	ENSMAMG00000020423	cstf3	100	96.788	Mastacembelus_armatus
ENSPLAG00000009456	cstf3	100	97.067	ENSMZEG00005012082	cstf3	100	97.067	Maylandia_zebra
ENSPLAG00000009456	cstf3	100	90.529	ENSMGAG00000001383	CSTF3	100	90.529	Meleagris_gallopavo
ENSPLAG00000009456	cstf3	100	90.529	ENSMAUG00000002487	Cstf3	100	90.529	Mesocricetus_auratus
ENSPLAG00000009456	cstf3	100	90.808	ENSMICG00000004784	CSTF3	100	90.880	Microcebus_murinus
ENSPLAG00000009456	cstf3	100	90.669	ENSMOCG00000017583	Cstf3	100	90.669	Microtus_ochrogaster
ENSPLAG00000009456	cstf3	99	96.469	ENSMMOG00000016026	cstf3	95	96.469	Mola_mola
ENSPLAG00000009456	cstf3	100	80.501	ENSMODG00000025205	-	100	80.501	Monodelphis_domestica
ENSPLAG00000009456	cstf3	100	90.947	ENSMODG00000009745	-	100	90.947	Monodelphis_domestica
ENSPLAG00000009456	cstf3	100	97.207	ENSMALG00000012050	cstf3	100	97.207	Monopterus_albus
ENSPLAG00000009456	cstf3	100	90.669	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.669	Mus_caroli
ENSPLAG00000009456	cstf3	100	90.669	ENSMUSG00000027176	Cstf3	100	90.669	Mus_musculus
ENSPLAG00000009456	cstf3	100	90.669	MGP_PahariEiJ_G0025464	Cstf3	100	90.669	Mus_pahari
ENSPLAG00000009456	cstf3	100	90.669	MGP_SPRETEiJ_G0024939	Cstf3	100	90.669	Mus_spretus
ENSPLAG00000009456	cstf3	100	90.669	ENSMPUG00000011457	CSTF3	100	90.669	Mustela_putorius_furo
ENSPLAG00000009456	cstf3	99	91.384	ENSMLUG00000003073	-	99	91.384	Myotis_lucifugus
ENSPLAG00000009456	cstf3	100	88.162	ENSMLUG00000026022	-	100	88.162	Myotis_lucifugus
ENSPLAG00000009456	cstf3	100	90.669	ENSNGAG00000010677	Cstf3	100	90.669	Nannospalax_galili
ENSPLAG00000009456	cstf3	87	97.111	ENSNBRG00000007345	cstf3	100	97.111	Neolamprologus_brichardi
ENSPLAG00000009456	cstf3	100	90.808	ENSNLEG00000017901	CSTF3	100	90.880	Nomascus_leucogenys
ENSPLAG00000009456	cstf3	73	90.057	ENSMEUG00000005640	-	100	90.057	Notamacropus_eugenii
ENSPLAG00000009456	cstf3	67	88.158	ENSOPRG00000000199	-	67	88.158	Ochotona_princeps
ENSPLAG00000009456	cstf3	100	90.808	ENSODEG00000016737	-	100	90.808	Octodon_degus
ENSPLAG00000009456	cstf3	89	79.403	ENSODEG00000006311	-	97	79.403	Octodon_degus
ENSPLAG00000009456	cstf3	100	97.067	ENSONIG00000005563	cstf3	100	97.067	Oreochromis_niloticus
ENSPLAG00000009456	cstf3	90	90.462	ENSOANG00000015140	CSTF3	100	90.462	Ornithorhynchus_anatinus
ENSPLAG00000009456	cstf3	100	90.529	ENSOCUG00000015417	CSTF3	100	90.529	Oryctolagus_cuniculus
ENSPLAG00000009456	cstf3	100	95.531	ENSORLG00000009762	cstf3	100	95.531	Oryzias_latipes
ENSPLAG00000009456	cstf3	100	95.531	ENSORLG00020005540	cstf3	100	95.531	Oryzias_latipes_hni
ENSPLAG00000009456	cstf3	100	95.391	ENSORLG00015003551	cstf3	100	95.391	Oryzias_latipes_hsok
ENSPLAG00000009456	cstf3	100	96.089	ENSOMEG00000003848	cstf3	100	96.089	Oryzias_melastigma
ENSPLAG00000009456	cstf3	100	90.430	ENSOGAG00000010229	CSTF3	100	90.430	Otolemur_garnettii
ENSPLAG00000009456	cstf3	90	90.980	ENSOARG00000017271	CSTF3	99	90.980	Ovis_aries
ENSPLAG00000009456	cstf3	99	87.994	ENSPPAG00000027358	CSTF3	99	87.994	Pan_paniscus
ENSPLAG00000009456	cstf3	100	90.947	ENSPPRG00000016852	CSTF3	100	90.947	Panthera_pardus
ENSPLAG00000009456	cstf3	100	90.947	ENSPTIG00000008716	CSTF3	100	90.947	Panthera_tigris_altaica
ENSPLAG00000009456	cstf3	100	90.808	ENSPTRG00000003485	CSTF3	100	90.808	Pan_troglodytes
ENSPLAG00000009456	cstf3	100	90.808	ENSPANG00000013722	CSTF3	97	94.655	Papio_anubis
ENSPLAG00000009456	cstf3	100	93.863	ENSPKIG00000023648	cstf3	100	93.863	Paramormyrops_kingsleyae
ENSPLAG00000009456	cstf3	100	90.808	ENSPSIG00000009173	CSTF3	100	90.808	Pelodiscus_sinensis
ENSPLAG00000009456	cstf3	77	97.080	ENSPMGG00000000164	cstf3	99	97.080	Periophthalmus_magnuspinnatus
ENSPLAG00000009456	cstf3	100	90.529	ENSPEMG00000011481	Cstf3	100	90.529	Peromyscus_maniculatus_bairdii
ENSPLAG00000009456	cstf3	99	79.437	ENSPMAG00000007282	cstf3	100	79.028	Petromyzon_marinus
ENSPLAG00000009456	cstf3	99	76.438	ENSPCIG00000030419	-	89	76.718	Phascolarctos_cinereus
ENSPLAG00000009456	cstf3	100	88.178	ENSPCIG00000026406	-	100	91.200	Phascolarctos_cinereus
ENSPLAG00000009456	cstf3	100	99.860	ENSPFOG00000017239	cstf3	100	99.860	Poecilia_formosa
ENSPLAG00000009456	cstf3	100	99.860	ENSPMEG00000010320	cstf3	100	99.860	Poecilia_mexicana
ENSPLAG00000009456	cstf3	100	99.721	ENSPREG00000013549	cstf3	100	99.721	Poecilia_reticulata
ENSPLAG00000009456	cstf3	100	90.808	ENSPPYG00000003375	CSTF3	100	90.808	Pongo_abelii
ENSPLAG00000009456	cstf3	71	95.819	ENSPCAG00000008025	-	71	95.819	Procavia_capensis
ENSPLAG00000009456	cstf3	100	85.794	ENSPCOG00000014417	CSTF3	100	85.794	Propithecus_coquereli
ENSPLAG00000009456	cstf3	100	85.655	ENSPVAG00000002350	CSTF3	100	85.655	Pteropus_vampyrus
ENSPLAG00000009456	cstf3	100	97.207	ENSPNYG00000018259	cstf3	100	97.207	Pundamilia_nyererei
ENSPLAG00000009456	cstf3	100	94.142	ENSPNAG00000020182	cstf3	100	94.142	Pygocentrus_nattereri
ENSPLAG00000009456	cstf3	87	90.400	ENSRNOG00000012089	Cstf3	100	90.400	Rattus_norvegicus
ENSPLAG00000009456	cstf3	99	90.395	ENSRBIG00000044258	CSTF3	100	90.880	Rhinopithecus_bieti
ENSPLAG00000009456	cstf3	100	90.808	ENSRROG00000043450	CSTF3	100	90.880	Rhinopithecus_roxellana
ENSPLAG00000009456	cstf3	100	90.808	ENSSBOG00000024764	CSTF3	98	96.214	Saimiri_boliviensis_boliviensis
ENSPLAG00000009456	cstf3	99	91.525	ENSSHAG00000018128	-	99	91.525	Sarcophilus_harrisii
ENSPLAG00000009456	cstf3	100	81.476	ENSSHAG00000003135	-	99	81.476	Sarcophilus_harrisii
ENSPLAG00000009456	cstf3	100	94.142	ENSSFOG00015022133	cstf3	100	94.142	Scleropages_formosus
ENSPLAG00000009456	cstf3	100	96.229	ENSSMAG00000002197	cstf3	100	96.229	Scophthalmus_maximus
ENSPLAG00000009456	cstf3	100	97.346	ENSSDUG00000020426	cstf3	100	97.346	Seriola_dumerili
ENSPLAG00000009456	cstf3	100	97.346	ENSSLDG00000025649	cstf3	100	97.346	Seriola_lalandi_dorsalis
ENSPLAG00000009456	cstf3	100	90.669	ENSSARG00000000391	CSTF3	100	90.669	Sorex_araneus
ENSPLAG00000009456	cstf3	96	90.738	ENSSPUG00000010546	CSTF3	100	90.738	Sphenodon_punctatus
ENSPLAG00000009456	cstf3	100	97.346	ENSSPAG00000004958	cstf3	100	97.346	Stegastes_partitus
ENSPLAG00000009456	cstf3	99	90.603	ENSSSCG00000040954	CSTF3	99	90.603	Sus_scrofa
ENSPLAG00000009456	cstf3	99	91.102	ENSTGUG00000005010	CSTF3	100	91.102	Taeniopygia_guttata
ENSPLAG00000009456	cstf3	100	95.391	ENSTRUG00000004959	cstf3	100	95.391	Takifugu_rubripes
ENSPLAG00000009456	cstf3	99	96.328	ENSTNIG00000013811	cstf3	99	96.328	Tetraodon_nigroviridis
ENSPLAG00000009456	cstf3	89	88.474	ENSTBEG00000001544	CSTF3	90	88.474	Tupaia_belangeri
ENSPLAG00000009456	cstf3	100	88.022	ENSTTRG00000016366	CSTF3	100	88.022	Tursiops_truncatus
ENSPLAG00000009456	cstf3	99	91.102	ENSUMAG00000018971	CSTF3	100	90.560	Ursus_maritimus
ENSPLAG00000009456	cstf3	100	90.669	ENSVPAG00000007800	CSTF3	100	90.669	Vicugna_pacos
ENSPLAG00000009456	cstf3	99	91.384	ENSVVUG00000014938	CSTF3	100	90.880	Vulpes_vulpes
ENSPLAG00000009456	cstf3	66	42.116	ENSXETG00000017946	-	99	42.116	Xenopus_tropicalis
ENSPLAG00000009456	cstf3	88	75.469	ENSXETG00000021399	cstf3	100	76.537	Xenopus_tropicalis
ENSPLAG00000009456	cstf3	87	99.037	ENSXCOG00000011741	cstf3	100	99.037	Xiphophorus_couchianus
ENSPLAG00000009456	cstf3	100	99.441	ENSXMAG00000009545	cstf3	100	99.441	Xiphophorus_maculatus