EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000009590 (Gene tree)
Gene ID: 106955633
Gene Symbol: vars
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 20945 bases
Position: chrKQ546068.1:143617-164561
Accession: 106955633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023825	Val_tRNA-synt_C	PF10458.9	1.4e-05	1	1
ENSPLAP00000023836	Val_tRNA-synt_C	PF10458.9	1.4e-05	1	1
ENSPLAP00000023825	tRNA-synt_1g	PF09334.11	4e-13	1	1
ENSPLAP00000023836	tRNA-synt_1g	PF09334.11	4.7e-13	1	1
ENSPLAP00000023825	Anticodon_1	PF08264.13	8.8e-35	1	1
ENSPLAP00000023836	Anticodon_1	PF08264.13	9e-35	1	1
ENSPLAP00000023836	tRNA-synt_1	PF00133.22	2.8e-208	1	1
ENSPLAP00000023825	tRNA-synt_1	PF00133.22	7.4e-206	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004972	-	3708	-	ENSPLAP00000023825	1235 (aa)	-	-
ENSPLAT00000004939	-	4120	XM_015045918	ENSPLAP00000023836	1274 (aa)	XP_014901404	UPI00072ECEC1

Gene Model

Click here to download ENSPLAG00000009590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000009590	vars	80	47.779	ENSPLAG00000019778	vars2	97	46.547

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009590	vars	100	65.854	ENSG00000204394	VARS	99	72.699	Homo_sapiens
ENSPLAG00000009590	vars	98	86.705	ENSAPOG00000020921	vars	96	90.017	Acanthochromis_polyacanthus
ENSPLAG00000009590	vars	98	86.705	ENSAPOG00000020691	vars	96	90.017	Acanthochromis_polyacanthus
ENSPLAG00000009590	vars	100	65.959	ENSAMEG00000006417	VARS	100	66.274	Ailuropoda_melanoleuca
ENSPLAG00000009590	vars	100	89.342	ENSACIG00000013752	vars	100	89.342	Amphilophus_citrinellus
ENSPLAG00000009590	vars	100	90.424	ENSAOCG00000002447	vars	99	90.424	Amphiprion_ocellaris
ENSPLAG00000009590	vars	100	90.267	ENSAPEG00000010638	vars	99	90.267	Amphiprion_percula
ENSPLAG00000009590	vars	100	85.748	ENSATEG00000020219	vars	100	85.600	Anabas_testudineus
ENSPLAG00000009590	vars	90	71.701	ENSACAG00000029133	-	99	71.701	Anolis_carolinensis
ENSPLAG00000009590	vars	100	65.932	ENSANAG00000015453	VARS	100	66.247	Aotus_nancymaae
ENSPLAG00000009590	vars	100	90.987	ENSACLG00000025699	vars	97	90.987	Astatotilapia_calliptera
ENSPLAG00000009590	vars	96	80.384	ENSAMXG00000017716	vars	96	80.384	Astyanax_mexicanus
ENSPLAG00000009590	vars	100	66.326	ENSBTAG00000005631	VARS	100	66.640	Bos_taurus
ENSPLAG00000009590	vars	100	65.696	ENSCJAG00000002604	VARS	100	66.011	Callithrix_jacchus
ENSPLAG00000009590	vars	100	65.696	ENSCAFG00000000636	VARS	100	66.011	Canis_familiaris
ENSPLAG00000009590	vars	94	67.003	ENSCAFG00020020790	VARS	96	67.338	Canis_lupus_dingo
ENSPLAG00000009590	vars	100	66.168	ENSCHIG00000011008	VARS	100	66.483	Capra_hircus
ENSPLAG00000009590	vars	100	65.775	ENSTSYG00000001567	VARS	100	66.090	Carlito_syrichta
ENSPLAG00000009590	vars	91	68.826	ENSCAPG00000013736	VARS	98	68.674	Cavia_aperea
ENSPLAG00000009590	vars	100	65.423	ENSCPOG00000000870	VARS	100	65.149	Cavia_porcellus
ENSPLAG00000009590	vars	100	66.247	ENSCCAG00000035656	VARS	100	66.247	Cebus_capucinus
ENSPLAG00000009590	vars	100	66.326	ENSCATG00000022394	VARS	100	66.326	Cercocebus_atys
ENSPLAG00000009590	vars	93	64.629	ENSCLAG00000009470	VARS	97	64.327	Chinchilla_lanigera
ENSPLAG00000009590	vars	100	66.090	ENSCSAG00000008784	VARS	100	66.090	Chlorocebus_sabaeus
ENSPLAG00000009590	vars	79	74.720	ENSCPBG00000007943	VARS	96	75.025	Chrysemys_picta_bellii
ENSPLAG00000009590	vars	100	66.090	ENSCANG00000033570	VARS	100	66.090	Colobus_angolensis_palliatus
ENSPLAG00000009590	vars	100	65.618	ENSCGRG00001005686	Vars	100	65.932	Cricetulus_griseus_chok1gshd
ENSPLAG00000009590	vars	93	63.697	ENSCGRG00000013352	Vars	78	64.030	Cricetulus_griseus_crigri
ENSPLAG00000009590	vars	100	82.775	ENSCSEG00000019652	vars	100	83.014	Cynoglossus_semilaevis
ENSPLAG00000009590	vars	100	95.063	ENSCVAG00000022398	vars	100	95.063	Cyprinodon_variegatus
ENSPLAG00000009590	vars	100	84.495	ENSDARG00000044575	vars	100	84.573	Danio_rerio
ENSPLAG00000009590	vars	84	71.606	ENSDORG00000016433	Vars	99	69.037	Dipodomys_ordii
ENSPLAG00000009590	vars	69	73.960	ENSETEG00000003824	VARS	77	74.503	Echinops_telfairi
ENSPLAG00000009590	vars	53	72.522	ENSEBUG00000007086	vars	83	72.870	Eptatretus_burgeri
ENSPLAG00000009590	vars	59	65.342	ENSEBUG00000004637	vars	100	65.342	Eptatretus_burgeri
ENSPLAG00000009590	vars	100	66.483	ENSEASG00005015673	VARS	100	66.798	Equus_asinus_asinus
ENSPLAG00000009590	vars	100	66.431	ENSECAG00000014620	VARS	100	66.824	Equus_caballus
ENSPLAG00000009590	vars	83	70.927	ENSEEUG00000004116	VARS	83	70.927	Erinaceus_europaeus
ENSPLAG00000009590	vars	100	83.619	ENSELUG00000006550	vars	97	83.541	Esox_lucius
ENSPLAG00000009590	vars	100	66.090	ENSFCAG00000004510	VARS	100	66.326	Felis_catus
ENSPLAG00000009590	vars	83	71.227	ENSFDAG00000011401	VARS	100	71.227	Fukomys_damarensis
ENSPLAG00000009590	vars	100	93.103	ENSFHEG00000010672	vars	100	93.574	Fundulus_heteroclitus
ENSPLAG00000009590	vars	100	81.231	ENSGMOG00000014908	vars	100	81.386	Gadus_morhua
ENSPLAG00000009590	vars	100	97.488	ENSGAFG00000021630	vars	100	97.488	Gambusia_affinis
ENSPLAG00000009590	vars	100	83.881	ENSGACG00000009601	vars	100	84.116	Gasterosteus_aculeatus
ENSPLAG00000009590	vars	50	57.969	ENSGAGG00000006508	-	91	61.066	Gopherus_agassizii
ENSPLAG00000009590	vars	100	66.404	ENSGGOG00000011364	VARS	100	66.404	Gorilla_gorilla
ENSPLAG00000009590	vars	100	90.909	ENSHBUG00000017151	vars	97	90.909	Haplochromis_burtoni
ENSPLAG00000009590	vars	100	65.591	ENSHGLG00000011646	VARS	100	65.669	Heterocephalus_glaber_female
ENSPLAG00000009590	vars	94	62.080	ENSHGLG00100018062	VARS	99	62.115	Heterocephalus_glaber_male
ENSPLAG00000009590	vars	99	84.988	ENSHCOG00000012198	vars	99	85.066	Hippocampus_comes
ENSPLAG00000009590	vars	100	83.568	ENSIPUG00000005218	vars	100	83.646	Ictalurus_punctatus
ENSPLAG00000009590	vars	100	66.562	ENSSTOG00000013112	VARS	100	66.562	Ictidomys_tridecemlineatus
ENSPLAG00000009590	vars	100	53.557	ENSJJAG00000015343	-	99	55.184	Jaculus_jaculus
ENSPLAG00000009590	vars	100	65.552	ENSJJAG00000019749	-	100	65.406	Jaculus_jaculus
ENSPLAG00000009590	vars	100	87.834	ENSKMAG00000009455	vars	100	87.834	Kryptolebias_marmoratus
ENSPLAG00000009590	vars	100	85.595	ENSLBEG00000010341	vars	100	84.929	Labrus_bergylta
ENSPLAG00000009590	vars	94	67.214	ENSLACG00000015232	VARS	99	67.294	Latimeria_chalumnae
ENSPLAG00000009590	vars	100	75.216	ENSLOCG00000004240	vars	100	74.980	Lepisosteus_oculatus
ENSPLAG00000009590	vars	100	65.984	ENSLAFG00000023090	VARS	100	65.984	Loxodonta_africana
ENSPLAG00000009590	vars	100	66.168	ENSMFAG00000001032	VARS	100	66.168	Macaca_fascicularis
ENSPLAG00000009590	vars	100	66.168	ENSMMUG00000006828	VARS	100	66.168	Macaca_mulatta
ENSPLAG00000009590	vars	100	66.168	ENSMNEG00000042072	VARS	100	66.168	Macaca_nemestrina
ENSPLAG00000009590	vars	100	66.247	ENSMLEG00000039307	VARS	100	66.247	Mandrillus_leucophaeus
ENSPLAG00000009590	vars	100	88.776	ENSMAMG00000003949	vars	100	88.776	Mastacembelus_armatus
ENSPLAG00000009590	vars	100	91.066	ENSMZEG00005018327	vars	97	91.066	Maylandia_zebra
ENSPLAG00000009590	vars	100	65.382	ENSMAUG00000006715	Vars	100	65.696	Mesocricetus_auratus
ENSPLAG00000009590	vars	100	66.090	ENSMICG00000003548	VARS	100	66.090	Microcebus_murinus
ENSPLAG00000009590	vars	100	65.076	ENSMOCG00000015404	Vars	100	65.394	Microtus_ochrogaster
ENSPLAG00000009590	vars	100	85.871	ENSMMOG00000015801	vars	100	85.793	Mola_mola
ENSPLAG00000009590	vars	100	65.932	ENSMODG00000015204	-	100	66.090	Monodelphis_domestica
ENSPLAG00000009590	vars	99	89.193	ENSMALG00000022532	vars	99	89.193	Monopterus_albus
ENSPLAG00000009590	vars	100	66.299	MGP_CAROLIEiJ_G0021491	Vars	100	66.299	Mus_caroli
ENSPLAG00000009590	vars	100	66.142	ENSMUSG00000007029	Vars	100	66.142	Mus_musculus
ENSPLAG00000009590	vars	100	66.063	MGP_PahariEiJ_G0020486	Vars	100	66.063	Mus_pahari
ENSPLAG00000009590	vars	100	66.220	MGP_SPRETEiJ_G0022396	Vars	100	66.220	Mus_spretus
ENSPLAG00000009590	vars	100	65.854	ENSMPUG00000010821	VARS	100	66.168	Mustela_putorius_furo
ENSPLAG00000009590	vars	78	68.694	ENSMLUG00000013126	VARS	100	68.959	Myotis_lucifugus
ENSPLAG00000009590	vars	100	65.748	ENSNGAG00000012151	Vars	100	65.854	Nannospalax_galili
ENSPLAG00000009590	vars	100	90.596	ENSNBRG00000020520	vars	100	90.596	Neolamprologus_brichardi
ENSPLAG00000009590	vars	100	65.932	ENSNLEG00000006351	VARS	100	66.247	Nomascus_leucogenys
ENSPLAG00000009590	vars	94	73.046	ENSMEUG00000011378	VARS	100	64.567	Notamacropus_eugenii
ENSPLAG00000009590	vars	100	65.932	ENSOPRG00000003607	VARS	100	66.247	Ochotona_princeps
ENSPLAG00000009590	vars	100	65.354	ENSODEG00000017681	VARS	100	65.354	Octodon_degus
ENSPLAG00000009590	vars	100	90.234	ENSONIG00000013064	vars	100	91.551	Oreochromis_niloticus
ENSPLAG00000009590	vars	77	67.727	ENSOANG00000005400	VARS	98	67.827	Ornithorhynchus_anatinus
ENSPLAG00000009590	vars	100	64.980	ENSOCUG00000022463	VARS	100	64.980	Oryctolagus_cuniculus
ENSPLAG00000009590	vars	100	89.105	ENSORLG00000013063	vars	100	89.183	Oryzias_latipes
ENSPLAG00000009590	vars	100	89.523	ENSORLG00020003504	vars	100	89.523	Oryzias_latipes_hni
ENSPLAG00000009590	vars	100	89.828	ENSORLG00015009001	vars	100	89.828	Oryzias_latipes_hsok
ENSPLAG00000009590	vars	100	90.063	ENSOMEG00000015016	vars	100	90.063	Oryzias_melastigma
ENSPLAG00000009590	vars	100	65.932	ENSOGAG00000007515	VARS	100	65.932	Otolemur_garnettii
ENSPLAG00000009590	vars	100	65.854	ENSPPAG00000034012	VARS	100	66.168	Pan_paniscus
ENSPLAG00000009590	vars	100	66.090	ENSPPRG00000014855	VARS	100	66.326	Panthera_pardus
ENSPLAG00000009590	vars	86	69.772	ENSPTIG00000010462	VARS	94	70.164	Panthera_tigris_altaica
ENSPLAG00000009590	vars	100	65.775	ENSPTRG00000017985	VARS	100	66.090	Pan_troglodytes
ENSPLAG00000009590	vars	100	64.683	ENSPANG00000014565	VARS	100	64.683	Papio_anubis
ENSPLAG00000009590	vars	100	80.233	ENSPKIG00000016304	vars	100	80.233	Paramormyrops_kingsleyae
ENSPLAG00000009590	vars	100	84.868	ENSPMGG00000023909	vars	100	85.108	Periophthalmus_magnuspinnatus
ENSPLAG00000009590	vars	100	65.618	ENSPEMG00000006639	Vars	100	65.932	Peromyscus_maniculatus_bairdii
ENSPLAG00000009590	vars	100	65.681	ENSPCIG00000018553	VARS	100	65.699	Phascolarctos_cinereus
ENSPLAG00000009590	vars	100	99.686	ENSPFOG00000015690	vars	100	99.686	Poecilia_formosa
ENSPLAG00000009590	vars	100	99.451	ENSPMEG00000004708	vars	100	99.451	Poecilia_mexicana
ENSPLAG00000009590	vars	100	91.915	ENSPREG00000013264	vars	100	91.915	Poecilia_reticulata
ENSPLAG00000009590	vars	100	64.673	ENSPPYG00000016460	VARS	100	64.673	Pongo_abelii
ENSPLAG00000009590	vars	86	66.963	ENSPCAG00000013565	VARS	86	66.963	Procavia_capensis
ENSPLAG00000009590	vars	100	65.802	ENSPCOG00000010942	VARS	100	66.195	Propithecus_coquereli
ENSPLAG00000009590	vars	100	63.965	ENSPVAG00000012403	VARS	100	63.965	Pteropus_vampyrus
ENSPLAG00000009590	vars	100	90.987	ENSPNYG00000022511	vars	100	90.987	Pundamilia_nyererei
ENSPLAG00000009590	vars	100	83.997	ENSPNAG00000020962	vars	100	84.334	Pygocentrus_nattereri
ENSPLAG00000009590	vars	100	65.775	ENSRNOG00000000867	Vars	100	65.775	Rattus_norvegicus
ENSPLAG00000009590	vars	100	66.090	ENSRBIG00000041669	VARS	100	66.090	Rhinopithecus_bieti
ENSPLAG00000009590	vars	100	66.090	ENSRROG00000045490	VARS	100	66.090	Rhinopithecus_roxellana
ENSPLAG00000009590	vars	100	65.696	ENSSBOG00000035402	VARS	100	66.011	Saimiri_boliviensis_boliviensis
ENSPLAG00000009590	vars	100	65.472	ENSSHAG00000006937	VARS	100	65.861	Sarcophilus_harrisii
ENSPLAG00000009590	vars	100	80.623	ENSSFOG00015014272	vars	100	80.623	Scleropages_formosus
ENSPLAG00000009590	vars	100	88.028	ENSSMAG00000009596	vars	99	88.106	Scophthalmus_maximus
ENSPLAG00000009590	vars	100	90.297	ENSSDUG00000014177	vars	100	90.532	Seriola_dumerili
ENSPLAG00000009590	vars	100	89.984	ENSSLDG00000025316	vars	100	90.219	Seriola_lalandi_dorsalis
ENSPLAG00000009590	vars	100	89.560	ENSSPAG00000017068	vars	100	89.717	Stegastes_partitus
ENSPLAG00000009590	vars	100	65.566	ENSSSCG00000038950	VARS	100	65.959	Sus_scrofa
ENSPLAG00000009590	vars	81	82.285	ENSTRUG00000012307	vars	97	82.126	Takifugu_rubripes
ENSPLAG00000009590	vars	100	85.658	ENSTNIG00000008011	vars	100	85.658	Tetraodon_nigroviridis
ENSPLAG00000009590	vars	100	60.358	ENSTTRG00000014128	VARS	100	60.358	Tursiops_truncatus
ENSPLAG00000009590	vars	100	64.308	ENSUAMG00000010424	VARS	100	64.436	Ursus_americanus
ENSPLAG00000009590	vars	100	60.717	ENSUMAG00000013486	VARS	98	64.976	Ursus_maritimus
ENSPLAG00000009590	vars	100	65.959	ENSVVUG00000021323	VARS	100	66.038	Vulpes_vulpes
ENSPLAG00000009590	vars	100	65.750	ENSXETG00000024076	vars	100	65.750	Xenopus_tropicalis
ENSPLAG00000009590	vars	100	95.326	ENSXCOG00000019172	vars	100	95.326	Xiphophorus_couchianus
ENSPLAG00000009590	vars	100	97.488	ENSXMAG00000010927	vars	100	97.488	Xiphophorus_maculatus