EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000009599 (Gene tree)
Gene ID: 106935746
Gene Symbol: cpsf4
Alias: -
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3282 bases
Position: chrKQ547323.1:38309-41590
Accession: 106935746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000023872	zf-CCCH	PF00642.24	1.3e-19	1	1
ENSPLAP00000023872	zf-CCHC	PF00098.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004825	-	741	XM_015016384	ENSPLAP00000023872	246 (aa)	XP_014871870	-

Gene Model

Click here to download ENSPLAG00000009599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009599	cpsf4	100	78.862	ENSG00000160917	CPSF4	100	97.321	Homo_sapiens
ENSPLAG00000009599	cpsf4	64	70.056	ENSAPOG00000004921	cpsf4	100	70.056	Acanthochromis_polyacanthus
ENSPLAG00000009599	cpsf4	100	75.465	ENSAMEG00000006252	CPSF4	100	75.465	Ailuropoda_melanoleuca
ENSPLAG00000009599	cpsf4	100	82.927	ENSACIG00000009248	cpsf4	100	83.333	Amphilophus_citrinellus
ENSPLAG00000009599	cpsf4	100	82.642	ENSAOCG00000019616	cpsf4	100	82.642	Amphiprion_ocellaris
ENSPLAG00000009599	cpsf4	100	82.642	ENSAPEG00000011679	cpsf4	100	82.642	Amphiprion_percula
ENSPLAG00000009599	cpsf4	100	85.081	ENSATEG00000007010	cpsf4	100	85.081	Anabas_testudineus
ENSPLAG00000009599	cpsf4	100	74.349	ENSACAG00000012941	CPSF4	89	74.349	Anolis_carolinensis
ENSPLAG00000009599	cpsf4	100	75.093	ENSANAG00000021360	CPSF4	100	75.093	Aotus_nancymaae
ENSPLAG00000009599	cpsf4	100	81.887	ENSACLG00000010374	cpsf4	100	81.887	Astatotilapia_calliptera
ENSPLAG00000009599	cpsf4	100	76.812	ENSAMXG00000031647	cpsf4	100	76.812	Astyanax_mexicanus
ENSPLAG00000009599	cpsf4	100	78.455	ENSBTAG00000002090	CPSF4	100	78.455	Bos_taurus
ENSPLAG00000009599	cpsf4	100	75.940	ENSCJAG00000015826	CPSF4	100	75.940	Callithrix_jacchus
ENSPLAG00000009599	cpsf4	100	75.465	ENSCAFG00000015036	CPSF4	100	86.747	Canis_familiaris
ENSPLAG00000009599	cpsf4	100	71.004	ENSCAFG00020014462	CPSF4	100	71.004	Canis_lupus_dingo
ENSPLAG00000009599	cpsf4	100	74.721	ENSCHIG00000014313	CPSF4	100	74.721	Capra_hircus
ENSPLAG00000009599	cpsf4	88	73.394	ENSTSYG00000008195	-	99	74.009	Carlito_syrichta
ENSPLAG00000009599	cpsf4	100	72.470	ENSTSYG00000014604	-	100	72.874	Carlito_syrichta
ENSPLAG00000009599	cpsf4	100	79.675	ENSTSYG00000005712	-	100	80.081	Carlito_syrichta
ENSPLAG00000009599	cpsf4	81	72.523	ENSCAPG00000013881	CPSF4	88	72.523	Cavia_aperea
ENSPLAG00000009599	cpsf4	100	79.268	ENSCPOG00000001783	CPSF4	100	79.675	Cavia_porcellus
ENSPLAG00000009599	cpsf4	100	75.093	ENSCCAG00000028291	CPSF4	100	75.093	Cebus_capucinus
ENSPLAG00000009599	cpsf4	100	79.352	ENSCATG00000038440	CPSF4	100	79.352	Cercocebus_atys
ENSPLAG00000009599	cpsf4	100	75.465	ENSCLAG00000007050	CPSF4	100	75.465	Chinchilla_lanigera
ENSPLAG00000009599	cpsf4	100	75.093	ENSCSAG00000017795	CPSF4	100	75.093	Chlorocebus_sabaeus
ENSPLAG00000009599	cpsf4	78	73.148	ENSCPBG00000020869	CPSF4	100	73.148	Chrysemys_picta_bellii
ENSPLAG00000009599	cpsf4	67	80.120	ENSCPBG00000010269	-	100	80.120	Chrysemys_picta_bellii
ENSPLAG00000009599	cpsf4	96	54.365	ENSCING00000021080	-	96	54.762	Ciona_intestinalis
ENSPLAG00000009599	cpsf4	96	52.482	ENSCSAVG00000011469	-	97	52.482	Ciona_savignyi
ENSPLAG00000009599	cpsf4	100	78.049	ENSCANG00000019384	CPSF4	100	78.049	Colobus_angolensis_palliatus
ENSPLAG00000009599	cpsf4	100	79.268	ENSCGRG00001024184	Cpsf4	100	79.675	Cricetulus_griseus_chok1gshd
ENSPLAG00000009599	cpsf4	100	75.465	ENSCGRG00000013892	Cpsf4	100	75.465	Cricetulus_griseus_crigri
ENSPLAG00000009599	cpsf4	100	80.755	ENSCSEG00000019055	cpsf4	100	80.755	Cynoglossus_semilaevis
ENSPLAG00000009599	cpsf4	100	87.170	ENSCVAG00000016528	cpsf4	100	87.170	Cyprinodon_variegatus
ENSPLAG00000009599	cpsf4	100	77.491	ENSDARG00000020217	cpsf4	100	77.491	Danio_rerio
ENSPLAG00000009599	cpsf4	100	75.093	ENSDNOG00000006344	CPSF4	100	75.093	Dasypus_novemcinctus
ENSPLAG00000009599	cpsf4	79	73.733	ENSDORG00000000742	Cpsf4	100	73.733	Dipodomys_ordii
ENSPLAG00000009599	cpsf4	100	53.378	FBgn0015621	Clp	99	53.378	Drosophila_melanogaster
ENSPLAG00000009599	cpsf4	76	92.121	ENSETEG00000002608	CPSF4	70	92.121	Echinops_telfairi
ENSPLAG00000009599	cpsf4	99	68.443	ENSEBUG00000012552	cpsf4	98	68.443	Eptatretus_burgeri
ENSPLAG00000009599	cpsf4	100	79.268	ENSEASG00005002487	CPSF4	100	79.675	Equus_asinus_asinus
ENSPLAG00000009599	cpsf4	100	75.465	ENSECAG00000007525	CPSF4	100	75.465	Equus_caballus
ENSPLAG00000009599	cpsf4	56	92.537	ENSEEUG00000002158	CPSF4	60	92.537	Erinaceus_europaeus
ENSPLAG00000009599	cpsf4	100	76.471	ENSELUG00000011481	cpsf4	100	76.471	Esox_lucius
ENSPLAG00000009599	cpsf4	100	75.465	ENSFCAG00000015070	CPSF4	100	75.465	Felis_catus
ENSPLAG00000009599	cpsf4	100	80.894	ENSFALG00000013799	CPSF4	100	80.894	Ficedula_albicollis
ENSPLAG00000009599	cpsf4	67	56.977	ENSFALG00000012906	-	100	56.977	Ficedula_albicollis
ENSPLAG00000009599	cpsf4	89	73.663	ENSFDAG00000014092	CPSF4	100	73.663	Fukomys_damarensis
ENSPLAG00000009599	cpsf4	100	87.170	ENSFHEG00000010880	cpsf4	100	87.170	Fundulus_heteroclitus
ENSPLAG00000009599	cpsf4	100	80.695	ENSGMOG00000002330	cpsf4	100	80.695	Gadus_morhua
ENSPLAG00000009599	cpsf4	65	34.831	ENSGALG00000004441	-	92	34.831	Gallus_gallus
ENSPLAG00000009599	cpsf4	100	80.081	ENSGALG00000004714	CPSF4	100	80.081	Gallus_gallus
ENSPLAG00000009599	cpsf4	100	91.288	ENSGAFG00000010580	cpsf4	100	91.288	Gambusia_affinis
ENSPLAG00000009599	cpsf4	100	80.709	ENSGACG00000007792	cpsf4	100	80.709	Gasterosteus_aculeatus
ENSPLAG00000009599	cpsf4	100	75.836	ENSGAGG00000021835	CPSF4	100	75.836	Gopherus_agassizii
ENSPLAG00000009599	cpsf4	72	76.836	ENSGAGG00000020579	-	98	76.836	Gopherus_agassizii
ENSPLAG00000009599	cpsf4	100	75.093	ENSGGOG00000015131	CPSF4	100	75.093	Gorilla_gorilla
ENSPLAG00000009599	cpsf4	100	81.887	ENSHBUG00000013699	cpsf4	100	81.887	Haplochromis_burtoni
ENSPLAG00000009599	cpsf4	100	75.277	ENSHGLG00000017150	CPSF4	100	74.539	Heterocephalus_glaber_female
ENSPLAG00000009599	cpsf4	100	48.780	ENSHGLG00100017302	-	100	49.187	Heterocephalus_glaber_male
ENSPLAG00000009599	cpsf4	86	71.610	ENSHGLG00100009215	-	100	70.763	Heterocephalus_glaber_male
ENSPLAG00000009599	cpsf4	100	81.509	ENSHCOG00000004397	cpsf4	100	81.509	Hippocampus_comes
ENSPLAG00000009599	cpsf4	100	76.753	ENSIPUG00000017147	cpsf4	100	77.122	Ictalurus_punctatus
ENSPLAG00000009599	cpsf4	100	78.862	ENSSTOG00000001688	CPSF4	100	78.862	Ictidomys_tridecemlineatus
ENSPLAG00000009599	cpsf4	100	75.465	ENSJJAG00000019426	Cpsf4	100	75.465	Jaculus_jaculus
ENSPLAG00000009599	cpsf4	100	82.642	ENSKMAG00000015642	cpsf4	100	82.642	Kryptolebias_marmoratus
ENSPLAG00000009599	cpsf4	100	76.753	ENSLACG00000010938	CPSF4	100	76.753	Latimeria_chalumnae
ENSPLAG00000009599	cpsf4	100	63.052	ENSLACG00000018470	-	100	63.052	Latimeria_chalumnae
ENSPLAG00000009599	cpsf4	100	75.836	ENSLOCG00000004814	cpsf4	100	75.836	Lepisosteus_oculatus
ENSPLAG00000009599	cpsf4	100	75.465	ENSLAFG00000000159	CPSF4	100	75.465	Loxodonta_africana
ENSPLAG00000009599	cpsf4	100	78.049	ENSMFAG00000001462	CPSF4	100	78.756	Macaca_fascicularis
ENSPLAG00000009599	cpsf4	100	75.093	ENSMMUG00000019191	CPSF4	100	75.093	Macaca_mulatta
ENSPLAG00000009599	cpsf4	100	78.049	ENSMNEG00000032306	CPSF4	100	78.049	Macaca_nemestrina
ENSPLAG00000009599	cpsf4	100	79.352	ENSMLEG00000034721	CPSF4	100	79.352	Mandrillus_leucophaeus
ENSPLAG00000009599	cpsf4	100	81.955	ENSMAMG00000006244	cpsf4	100	81.955	Mastacembelus_armatus
ENSPLAG00000009599	cpsf4	100	81.887	ENSMZEG00005007515	cpsf4	100	81.887	Maylandia_zebra
ENSPLAG00000009599	cpsf4	86	77.830	ENSMGAG00000004235	CPSF4	100	77.830	Meleagris_gallopavo
ENSPLAG00000009599	cpsf4	100	75.465	ENSMAUG00000021253	Cpsf4	100	75.465	Mesocricetus_auratus
ENSPLAG00000009599	cpsf4	100	75.093	ENSMICG00000017429	CPSF4	100	75.093	Microcebus_murinus
ENSPLAG00000009599	cpsf4	100	75.465	ENSMOCG00000014901	Cpsf4	100	75.465	Microtus_ochrogaster
ENSPLAG00000009599	cpsf4	100	82.331	ENSMMOG00000001813	cpsf4	100	86.207	Mola_mola
ENSPLAG00000009599	cpsf4	100	75.465	ENSMODG00000001367	CPSF4	100	75.465	Monodelphis_domestica
ENSPLAG00000009599	cpsf4	100	81.955	ENSMALG00000012611	cpsf4	100	81.955	Monopterus_albus
ENSPLAG00000009599	cpsf4	100	79.268	MGP_CAROLIEiJ_G0028012	Cpsf4	100	79.675	Mus_caroli
ENSPLAG00000009599	cpsf4	100	79.268	ENSMUSG00000029625	Cpsf4	100	79.675	Mus_musculus
ENSPLAG00000009599	cpsf4	100	79.268	MGP_PahariEiJ_G0024581	Cpsf4	100	79.675	Mus_pahari
ENSPLAG00000009599	cpsf4	100	78.862	MGP_SPRETEiJ_G0029013	Cpsf4	100	79.675	Mus_spretus
ENSPLAG00000009599	cpsf4	100	75.465	ENSMPUG00000016508	CPSF4	100	75.465	Mustela_putorius_furo
ENSPLAG00000009599	cpsf4	86	76.415	ENSMLUG00000010980	CPSF4	100	76.887	Myotis_lucifugus
ENSPLAG00000009599	cpsf4	100	75.465	ENSNGAG00000001567	Cpsf4	100	75.465	Nannospalax_galili
ENSPLAG00000009599	cpsf4	90	80.498	ENSNBRG00000003943	cpsf4	98	80.498	Neolamprologus_brichardi
ENSPLAG00000009599	cpsf4	100	78.862	ENSNLEG00000011074	CPSF4	100	79.675	Nomascus_leucogenys
ENSPLAG00000009599	cpsf4	100	75.465	ENSMEUG00000006955	CPSF4	100	75.465	Notamacropus_eugenii
ENSPLAG00000009599	cpsf4	100	75.093	ENSOPRG00000013663	CPSF4	100	75.093	Ochotona_princeps
ENSPLAG00000009599	cpsf4	100	75.465	ENSODEG00000011181	-	100	75.465	Octodon_degus
ENSPLAG00000009599	cpsf4	100	60.618	ENSODEG00000009779	-	100	60.618	Octodon_degus
ENSPLAG00000009599	cpsf4	98	66.942	ENSODEG00000018283	-	91	67.355	Octodon_degus
ENSPLAG00000009599	cpsf4	100	81.887	ENSONIG00000008495	cpsf4	100	81.887	Oreochromis_niloticus
ENSPLAG00000009599	cpsf4	86	73.504	ENSOANG00000007729	CPSF4	100	73.504	Ornithorhynchus_anatinus
ENSPLAG00000009599	cpsf4	100	51.079	ENSOANG00000009568	-	100	51.079	Ornithorhynchus_anatinus
ENSPLAG00000009599	cpsf4	100	75.093	ENSOCUG00000002437	CPSF4	70	75.093	Oryctolagus_cuniculus
ENSPLAG00000009599	cpsf4	100	84.151	ENSORLG00000022798	cpsf4	100	84.151	Oryzias_latipes
ENSPLAG00000009599	cpsf4	100	84.151	ENSORLG00020008548	cpsf4	100	84.151	Oryzias_latipes_hni
ENSPLAG00000009599	cpsf4	100	83.774	ENSORLG00015019575	cpsf4	100	83.774	Oryzias_latipes_hsok
ENSPLAG00000009599	cpsf4	100	83.396	ENSOMEG00000005176	cpsf4	100	83.396	Oryzias_melastigma
ENSPLAG00000009599	cpsf4	100	75.465	ENSOGAG00000010884	CPSF4	100	75.465	Otolemur_garnettii
ENSPLAG00000009599	cpsf4	100	69.343	ENSOARG00000018668	CPSF4	100	69.343	Ovis_aries
ENSPLAG00000009599	cpsf4	100	75.093	ENSPPAG00000043355	CPSF4	100	75.093	Pan_paniscus
ENSPLAG00000009599	cpsf4	100	75.465	ENSPPRG00000003134	CPSF4	100	75.465	Panthera_pardus
ENSPLAG00000009599	cpsf4	89	74.380	ENSPTIG00000005604	CPSF4	90	74.380	Panthera_tigris_altaica
ENSPLAG00000009599	cpsf4	100	75.093	ENSPTRG00000019453	CPSF4	100	75.093	Pan_troglodytes
ENSPLAG00000009599	cpsf4	100	78.049	ENSPANG00000023123	CPSF4	100	78.049	Papio_anubis
ENSPLAG00000009599	cpsf4	100	74.453	ENSPKIG00000014278	cpsf4	100	74.453	Paramormyrops_kingsleyae
ENSPLAG00000009599	cpsf4	78	72.685	ENSPSIG00000011229	CPSF4	100	72.685	Pelodiscus_sinensis
ENSPLAG00000009599	cpsf4	79	62.051	ENSPSIG00000018198	-	100	62.051	Pelodiscus_sinensis
ENSPLAG00000009599	cpsf4	100	77.823	ENSPMGG00000017735	cpsf4	100	77.823	Periophthalmus_magnuspinnatus
ENSPLAG00000009599	cpsf4	100	75.465	ENSPEMG00000004508	Cpsf4	100	75.465	Peromyscus_maniculatus_bairdii
ENSPLAG00000009599	cpsf4	100	75.465	ENSPCIG00000024776	CPSF4	100	75.465	Phascolarctos_cinereus
ENSPLAG00000009599	cpsf4	100	91.288	ENSPFOG00000014912	cpsf4	100	91.288	Poecilia_formosa
ENSPLAG00000009599	cpsf4	100	91.288	ENSPMEG00000009790	cpsf4	100	91.288	Poecilia_mexicana
ENSPLAG00000009599	cpsf4	100	91.985	ENSPREG00000018166	cpsf4	100	91.985	Poecilia_reticulata
ENSPLAG00000009599	cpsf4	86	72.650	ENSPPYG00000017378	CPSF4	100	72.650	Pongo_abelii
ENSPLAG00000009599	cpsf4	100	75.465	ENSPCAG00000001892	CPSF4	100	75.465	Procavia_capensis
ENSPLAG00000009599	cpsf4	100	75.093	ENSPCOG00000012771	CPSF4	100	75.093	Propithecus_coquereli
ENSPLAG00000009599	cpsf4	100	70.632	ENSPVAG00000007531	CPSF4	100	70.632	Pteropus_vampyrus
ENSPLAG00000009599	cpsf4	100	81.887	ENSPNYG00000018559	cpsf4	100	81.887	Pundamilia_nyererei
ENSPLAG00000009599	cpsf4	100	77.174	ENSPNAG00000003736	cpsf4	100	77.174	Pygocentrus_nattereri
ENSPLAG00000009599	cpsf4	100	78.862	ENSRNOG00000000985	Cpsf4	100	78.862	Rattus_norvegicus
ENSPLAG00000009599	cpsf4	86	73.077	ENSRBIG00000033886	CPSF4	100	73.077	Rhinopithecus_bieti
ENSPLAG00000009599	cpsf4	100	78.862	ENSRROG00000040431	CPSF4	100	79.675	Rhinopithecus_roxellana
ENSPLAG00000009599	cpsf4	100	75.093	ENSSBOG00000020493	CPSF4	100	78.756	Saimiri_boliviensis_boliviensis
ENSPLAG00000009599	cpsf4	100	75.465	ENSSHAG00000011533	CPSF4	100	75.465	Sarcophilus_harrisii
ENSPLAG00000009599	cpsf4	100	75.000	ENSSFOG00015007883	cpsf4	100	75.000	Scleropages_formosus
ENSPLAG00000009599	cpsf4	100	83.806	ENSSMAG00000006374	cpsf4	100	83.806	Scophthalmus_maximus
ENSPLAG00000009599	cpsf4	100	83.459	ENSSDUG00000018887	cpsf4	100	83.459	Seriola_dumerili
ENSPLAG00000009599	cpsf4	100	83.083	ENSSLDG00000019078	cpsf4	100	83.083	Seriola_lalandi_dorsalis
ENSPLAG00000009599	cpsf4	86	73.504	ENSSARG00000012416	CPSF4	100	73.504	Sorex_araneus
ENSPLAG00000009599	cpsf4	100	75.093	ENSSPUG00000003549	CPSF4	100	75.093	Sphenodon_punctatus
ENSPLAG00000009599	cpsf4	96	62.869	ENSSPUG00000014803	-	98	62.869	Sphenodon_punctatus
ENSPLAG00000009599	cpsf4	100	83.740	ENSSPAG00000006174	cpsf4	100	83.740	Stegastes_partitus
ENSPLAG00000009599	cpsf4	100	78.862	ENSSSCG00000026896	CPSF4	100	79.675	Sus_scrofa
ENSPLAG00000009599	cpsf4	100	79.839	ENSTGUG00000007552	CPSF4	100	79.839	Taeniopygia_guttata
ENSPLAG00000009599	cpsf4	100	79.245	ENSTRUG00000024220	cpsf4	100	79.245	Takifugu_rubripes
ENSPLAG00000009599	cpsf4	100	80.000	ENSTNIG00000006265	cpsf4	100	80.000	Tetraodon_nigroviridis
ENSPLAG00000009599	cpsf4	86	69.362	ENSTBEG00000011406	CPSF4	100	69.362	Tupaia_belangeri
ENSPLAG00000009599	cpsf4	81	90.909	ENSTTRG00000003007	CPSF4	75	90.909	Tursiops_truncatus
ENSPLAG00000009599	cpsf4	93	75.983	ENSUAMG00000008051	CPSF4	85	77.679	Ursus_americanus
ENSPLAG00000009599	cpsf4	100	78.862	ENSUMAG00000009474	CPSF4	100	78.862	Ursus_maritimus
ENSPLAG00000009599	cpsf4	100	79.268	ENSVVUG00000008824	CPSF4	100	79.675	Vulpes_vulpes
ENSPLAG00000009599	cpsf4	99	58.519	ENSXETG00000004641	cpsf4l	99	58.519	Xenopus_tropicalis
ENSPLAG00000009599	cpsf4	100	71.685	ENSXETG00000009892	cpsf4	100	71.685	Xenopus_tropicalis
ENSPLAG00000009599	cpsf4	100	90.909	ENSXCOG00000016040	cpsf4	100	90.909	Xiphophorus_couchianus
ENSPLAG00000009599	cpsf4	100	91.288	ENSXMAG00000024670	cpsf4	100	91.288	Xiphophorus_maculatus