EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000009650 (Gene tree)
Gene ID: 106959422
Gene Symbol: zgc:165603
Alias: -
Full Name: CUGBP Elav-like family member 5
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 18279 bases
Position: chrKQ545367.1:515011-533289
Accession: 106959422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007325	RRM_1	PF00076.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004752	-	558	XM_015051987	ENSPLAP00000007325	185 (aa)	XP_014907473	UPI00072EE670

Gene Model

Click here to download ENSPLAG00000009650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009650's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000009650	zgc:165603	50	35.484	ENSPLAG00000013501	celf5a	60	35.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009650	zgc:165603	78	68.276	ENSAOCG00000012598	zgc:165603	66	68.276	Amphiprion_ocellaris
ENSPLAG00000009650	zgc:165603	50	80.435	ENSAMXG00000036838	-	72	86.047	Astyanax_mexicanus
ENSPLAG00000009650	zgc:165603	50	80.769	ENSBTAG00000019131	CELF3	52	81.818	Bos_taurus
ENSPLAG00000009650	zgc:165603	83	96.078	ENSCVAG00000005395	zgc:165603	99	96.078	Cyprinodon_variegatus
ENSPLAG00000009650	zgc:165603	81	79.221	ENSDARG00000098702	zgc:165603	99	83.117	Danio_rerio
ENSPLAG00000009650	zgc:165603	54	85.859	ENSLACG00000009899	zgc:165603	77	85.859	Latimeria_chalumnae
ENSPLAG00000009650	zgc:165603	50	81.818	MGP_CAROLIEiJ_G0025314	Celf3	50	36.559	Mus_caroli
ENSPLAG00000009650	zgc:165603	50	83.117	ENSMUSG00000034818	Celf5	92	34.884	Mus_musculus
ENSPLAG00000009650	zgc:165603	50	81.818	ENSMUSG00000028137	Celf3	50	36.559	Mus_musculus
ENSPLAG00000009650	zgc:165603	50	81.818	MGP_PahariEiJ_G0026757	Celf3	50	36.559	Mus_pahari
ENSPLAG00000009650	zgc:165603	50	83.117	MGP_SPRETEiJ_G0016461	Celf5	92	34.884	Mus_spretus
ENSPLAG00000009650	zgc:165603	50	81.818	MGP_SPRETEiJ_G0026256	Celf3	50	36.559	Mus_spretus
ENSPLAG00000009650	zgc:165603	85	66.250	ENSPKIG00000018966	zgc:165603	67	68.667	Paramormyrops_kingsleyae
ENSPLAG00000009650	zgc:165603	80	74.324	ENSPMEG00000003804	zgc:165603	81	74.324	Poecilia_mexicana
ENSPLAG00000009650	zgc:165603	50	81.818	ENSSBOG00000021984	CELF3	51	81.818	Saimiri_boliviensis_boliviensis
ENSPLAG00000009650	zgc:165603	50	37.634	ENSXETG00000012296	celf3	65	37.634	Xenopus_tropicalis
ENSPLAG00000009650	zgc:165603	82	98.675	ENSXCOG00000009514	-	50	98.675	Xiphophorus_couchianus