EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000009659 (Gene tree)
Gene ID: 106942289
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 502-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8280 bases
Position: chrKQ545410.1:500159-508438
Accession: 106942289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007342	zf-C2H2	PF00096.26	9.1e-21	1	3
ENSPLAP00000007342	zf-C2H2	PF00096.26	9.1e-21	2	3
ENSPLAP00000007342	zf-C2H2	PF00096.26	9.1e-21	3	3
ENSPLAP00000007342	zf-met	PF12874.7	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004728	-	3744	XM_015025538	ENSPLAP00000007342	420 (aa)	XP_014881024	UPI00072DDEDE

Gene Model

Click here to download ENSPLAG00000009659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000009659	-	50	42.857	ENSPLAG00000006859	-	96	42.857
ENSPLAG00000009659	-	55	49.541	ENSPLAG00000006838	-	99	49.541
ENSPLAG00000009659	-	59	41.284	ENSPLAG00000004735	-	90	50.000
ENSPLAG00000009659	-	51	45.946	ENSPLAG00000016662	-	95	45.946
ENSPLAG00000009659	-	97	46.296	ENSPLAG00000013745	-	98	46.296
ENSPLAG00000009659	-	50	48.624	ENSPLAG00000006864	-	84	48.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009659	-	51	54.321	ENSAMXG00000035437	-	97	54.321	Astyanax_mexicanus
ENSPLAG00000009659	-	53	46.789	ENSAMXG00000040806	-	89	46.789	Astyanax_mexicanus
ENSPLAG00000009659	-	80	49.091	ENSCPBG00000005586	-	67	49.091	Chrysemys_picta_bellii
ENSPLAG00000009659	-	57	46.789	ENSCSEG00000003757	-	98	53.086	Cynoglossus_semilaevis
ENSPLAG00000009659	-	50	48.113	ENSCVAG00000022991	-	98	48.113	Cyprinodon_variegatus
ENSPLAG00000009659	-	83	48.148	ENSEBUG00000016292	-	85	48.148	Eptatretus_burgeri
ENSPLAG00000009659	-	58	43.243	ENSELUG00000017463	-	87	52.000	Esox_lucius
ENSPLAG00000009659	-	58	39.450	ENSELUG00000019204	-	85	48.148	Esox_lucius
ENSPLAG00000009659	-	50	44.944	ENSFHEG00000016640	-	82	44.944	Fundulus_heteroclitus
ENSPLAG00000009659	-	100	94.286	ENSGAFG00000003154	-	100	94.286	Gambusia_affinis
ENSPLAG00000009659	-	53	49.153	ENSHCOG00000008234	-	70	49.153	Hippocampus_comes
ENSPLAG00000009659	-	66	49.650	ENSHCOG00000010212	-	96	49.650	Hippocampus_comes
ENSPLAG00000009659	-	54	47.619	ENSLBEG00000009580	-	82	47.619	Labrus_bergylta
ENSPLAG00000009659	-	71	56.757	ENSOMEG00000020943	-	57	56.757	Oryzias_melastigma
ENSPLAG00000009659	-	50	49.020	ENSPSIG00000005128	-	100	49.020	Pelodiscus_sinensis
ENSPLAG00000009659	-	100	98.333	ENSPMEG00000024345	-	100	98.333	Poecilia_mexicana
ENSPLAG00000009659	-	59	51.316	ENSXCOG00000001200	-	92	46.789	Xiphophorus_couchianus
ENSPLAG00000009659	-	100	94.762	ENSXMAG00000025208	-	100	94.762	Xiphophorus_maculatus