EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000009709 (Gene tree)
Gene ID: 106959788
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 6110 bases
Position: chrKQ546433.1:79442-85551
Accession: 106959788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007376	TRM13	PF05206.14	1.1e-78	1	1
ENSPLAP00000007376	zf-U11-48K	PF05253.12	9.8e-10	1	1
ENSPLAP00000007376	zf-TRM13_CCCH	PF11722.8	3.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004667	-	1693	XM_015052560	ENSPLAP00000007376	445 (aa)	XP_014908046	UPI00072E3A88

Gene Model

Click here to download ENSPLAG00000009709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009709	trmt13	99	49.469	ENSG00000122435	TRMT13	96	49.286	Homo_sapiens
ENSPLAG00000009709	trmt13	100	64.082	ENSAPOG00000015131	trmt13	99	64.490	Acanthochromis_polyacanthus
ENSPLAG00000009709	trmt13	99	48.723	ENSAMEG00000008917	TRMT13	95	48.723	Ailuropoda_melanoleuca
ENSPLAG00000009709	trmt13	99	64.719	ENSACIG00000005804	trmt13	95	63.557	Amphilophus_citrinellus
ENSPLAG00000009709	trmt13	100	64.622	ENSAOCG00000023585	trmt13	99	64.622	Amphiprion_ocellaris
ENSPLAG00000009709	trmt13	100	64.826	ENSAPEG00000004025	trmt13	99	64.826	Amphiprion_percula
ENSPLAG00000009709	trmt13	99	65.451	ENSATEG00000006597	trmt13	96	65.584	Anabas_testudineus
ENSPLAG00000009709	trmt13	90	49.884	ENSAPLG00000014924	TRMT13	98	49.884	Anas_platyrhynchos
ENSPLAG00000009709	trmt13	99	52.034	ENSACAG00000003498	TRMT13	97	52.034	Anolis_carolinensis
ENSPLAG00000009709	trmt13	99	48.936	ENSANAG00000019525	TRMT13	95	48.936	Aotus_nancymaae
ENSPLAG00000009709	trmt13	99	67.841	ENSACLG00000020018	trmt13	99	67.841	Astatotilapia_calliptera
ENSPLAG00000009709	trmt13	99	52.979	ENSAMXG00000017963	trmt13	98	54.077	Astyanax_mexicanus
ENSPLAG00000009709	trmt13	99	48.195	ENSBTAG00000015781	TRMT13	95	48.195	Bos_taurus
ENSPLAG00000009709	trmt13	99	48.614	ENSCJAG00000000200	TRMT13	89	58.865	Callithrix_jacchus
ENSPLAG00000009709	trmt13	65	46.057	ENSCAFG00000020021	TRMT13	97	46.057	Canis_familiaris
ENSPLAG00000009709	trmt13	60	54.444	ENSCAFG00020011572	TRMT13	90	54.444	Canis_lupus_dingo
ENSPLAG00000009709	trmt13	99	48.203	ENSCHIG00000015395	TRMT13	96	48.203	Capra_hircus
ENSPLAG00000009709	trmt13	99	49.370	ENSTSYG00000010811	TRMT13	98	56.000	Carlito_syrichta
ENSPLAG00000009709	trmt13	53	76.471	ENSCAPG00000009085	TRMT13	94	39.496	Cavia_aperea
ENSPLAG00000009709	trmt13	99	49.260	ENSCPOG00000000694	TRMT13	96	49.260	Cavia_porcellus
ENSPLAG00000009709	trmt13	99	49.149	ENSCCAG00000023772	TRMT13	95	49.149	Cebus_capucinus
ENSPLAG00000009709	trmt13	99	49.682	ENSCATG00000033556	TRMT13	95	49.682	Cercocebus_atys
ENSPLAG00000009709	trmt13	90	48.810	ENSCLAG00000008220	TRMT13	98	49.420	Chinchilla_lanigera
ENSPLAG00000009709	trmt13	99	49.149	ENSCSAG00000001506	TRMT13	95	49.149	Chlorocebus_sabaeus
ENSPLAG00000009709	trmt13	99	51.163	ENSCPBG00000026671	TRMT13	96	51.163	Chrysemys_picta_bellii
ENSPLAG00000009709	trmt13	99	49.469	ENSCANG00000034659	TRMT13	95	49.469	Colobus_angolensis_palliatus
ENSPLAG00000009709	trmt13	99	48.620	ENSCGRG00001021601	Trmt13	95	48.620	Cricetulus_griseus_chok1gshd
ENSPLAG00000009709	trmt13	50	44.578	ENSCGRG00000000093	-	96	44.578	Cricetulus_griseus_crigri
ENSPLAG00000009709	trmt13	100	64.944	ENSCSEG00000000591	trmt13	98	64.944	Cynoglossus_semilaevis
ENSPLAG00000009709	trmt13	100	71.459	ENSCVAG00000017342	trmt13	94	71.459	Cyprinodon_variegatus
ENSPLAG00000009709	trmt13	99	53.680	ENSDARG00000102846	trmt13	97	53.680	Danio_rerio
ENSPLAG00000009709	trmt13	60	54.015	ENSDNOG00000001710	TRMT13	80	54.015	Dasypus_novemcinctus
ENSPLAG00000009709	trmt13	99	48.936	ENSDORG00000015808	Trmt13	95	48.936	Dipodomys_ordii
ENSPLAG00000009709	trmt13	99	35.512	FBgn0037435	CG18048	95	35.512	Drosophila_melanogaster
ENSPLAG00000009709	trmt13	99	43.125	ENSETEG00000005819	TRMT13	96	43.125	Echinops_telfairi
ENSPLAG00000009709	trmt13	98	43.844	ENSEBUG00000014444	trmt13	96	43.844	Eptatretus_burgeri
ENSPLAG00000009709	trmt13	99	48.723	ENSEASG00005015918	TRMT13	95	48.723	Equus_asinus_asinus
ENSPLAG00000009709	trmt13	99	48.723	ENSECAG00000022626	TRMT13	95	48.723	Equus_caballus
ENSPLAG00000009709	trmt13	79	60.000	ENSEEUG00000000294	TRMT13	73	60.000	Erinaceus_europaeus
ENSPLAG00000009709	trmt13	100	54.430	ENSELUG00000003803	trmt13	98	54.565	Esox_lucius
ENSPLAG00000009709	trmt13	99	48.085	ENSFCAG00000030618	TRMT13	98	48.951	Felis_catus
ENSPLAG00000009709	trmt13	99	52.381	ENSFALG00000002424	TRMT13	95	52.381	Ficedula_albicollis
ENSPLAG00000009709	trmt13	99	48.723	ENSFDAG00000006342	TRMT13	95	48.723	Fukomys_damarensis
ENSPLAG00000009709	trmt13	84	73.434	ENSFHEG00000022954	trmt13	99	73.188	Fundulus_heteroclitus
ENSPLAG00000009709	trmt13	98	52.116	ENSGMOG00000013223	trmt13	99	52.809	Gadus_morhua
ENSPLAG00000009709	trmt13	98	51.732	ENSGALG00000005290	TRMT13	96	51.931	Gallus_gallus
ENSPLAG00000009709	trmt13	84	93.583	ENSGAFG00000001577	trmt13	86	93.583	Gambusia_affinis
ENSPLAG00000009709	trmt13	99	66.812	ENSGACG00000013428	trmt13	98	66.812	Gasterosteus_aculeatus
ENSPLAG00000009709	trmt13	99	50.844	ENSGAGG00000023303	TRMT13	96	57.554	Gopherus_agassizii
ENSPLAG00000009709	trmt13	99	49.257	ENSGGOG00000005616	TRMT13	95	49.257	Gorilla_gorilla
ENSPLAG00000009709	trmt13	99	67.615	ENSHBUG00000007754	trmt13	99	67.615	Haplochromis_burtoni
ENSPLAG00000009709	trmt13	99	49.149	ENSHGLG00000002164	TRMT13	95	49.149	Heterocephalus_glaber_female
ENSPLAG00000009709	trmt13	99	49.149	ENSHGLG00100001618	TRMT13	95	49.149	Heterocephalus_glaber_male
ENSPLAG00000009709	trmt13	99	56.570	ENSHCOG00000020553	trmt13	98	56.570	Hippocampus_comes
ENSPLAG00000009709	trmt13	99	54.902	ENSIPUG00000024787	trmt13	98	55.991	Ictalurus_punctatus
ENSPLAG00000009709	trmt13	99	48.936	ENSSTOG00000013483	TRMT13	95	48.936	Ictidomys_tridecemlineatus
ENSPLAG00000009709	trmt13	99	48.936	ENSJJAG00000018012	Trmt13	96	48.936	Jaculus_jaculus
ENSPLAG00000009709	trmt13	65	65.217	ENSKMAG00000007639	trmt13	92	65.217	Kryptolebias_marmoratus
ENSPLAG00000009709	trmt13	100	64.731	ENSLBEG00000020238	trmt13	99	65.161	Labrus_bergylta
ENSPLAG00000009709	trmt13	99	50.855	ENSLACG00000013153	TRMT13	99	49.505	Latimeria_chalumnae
ENSPLAG00000009709	trmt13	99	52.814	ENSLOCG00000000418	trmt13	97	53.145	Lepisosteus_oculatus
ENSPLAG00000009709	trmt13	78	47.861	ENSLAFG00000002383	TRMT13	98	47.861	Loxodonta_africana
ENSPLAG00000009709	trmt13	99	49.469	ENSMFAG00000034681	TRMT13	95	49.469	Macaca_fascicularis
ENSPLAG00000009709	trmt13	99	49.469	ENSMMUG00000004243	TRMT13	95	49.469	Macaca_mulatta
ENSPLAG00000009709	trmt13	99	49.469	ENSMNEG00000036102	TRMT13	95	49.469	Macaca_nemestrina
ENSPLAG00000009709	trmt13	99	49.682	ENSMLEG00000034258	TRMT13	95	49.682	Mandrillus_leucophaeus
ENSPLAG00000009709	trmt13	99	65.646	ENSMAMG00000016597	trmt13	96	65.646	Mastacembelus_armatus
ENSPLAG00000009709	trmt13	99	67.621	ENSMZEG00005020959	trmt13	99	67.621	Maylandia_zebra
ENSPLAG00000009709	trmt13	91	51.402	ENSMGAG00000006970	TRMT13	99	51.402	Meleagris_gallopavo
ENSPLAG00000009709	trmt13	99	48.945	ENSMAUG00000010448	Trmt13	96	48.945	Mesocricetus_auratus
ENSPLAG00000009709	trmt13	99	49.257	ENSMICG00000005283	TRMT13	96	49.286	Microcebus_murinus
ENSPLAG00000009709	trmt13	99	49.049	ENSMOCG00000019914	Trmt13	96	48.729	Microtus_ochrogaster
ENSPLAG00000009709	trmt13	61	61.255	ENSMMOG00000007762	trmt13	90	61.255	Mola_mola
ENSPLAG00000009709	trmt13	99	47.899	ENSMODG00000003646	TRMT13	96	47.899	Monodelphis_domestica
ENSPLAG00000009709	trmt13	100	65.275	ENSMALG00000020965	trmt13	97	64.901	Monopterus_albus
ENSPLAG00000009709	trmt13	99	49.153	MGP_CAROLIEiJ_G0025568	Trmt13	96	50.820	Mus_caroli
ENSPLAG00000009709	trmt13	99	48.941	ENSMUSG00000033439	Trmt13	96	50.820	Mus_musculus
ENSPLAG00000009709	trmt13	99	49.153	MGP_PahariEiJ_G0027014	Trmt13	96	49.153	Mus_pahari
ENSPLAG00000009709	trmt13	99	49.156	MGP_SPRETEiJ_G0026518	Trmt13	96	50.820	Mus_spretus
ENSPLAG00000009709	trmt13	79	47.606	ENSMPUG00000002078	-	98	47.606	Mustela_putorius_furo
ENSPLAG00000009709	trmt13	99	49.893	ENSMLUG00000002124	TRMT13	95	49.893	Myotis_lucifugus
ENSPLAG00000009709	trmt13	99	62.144	ENSNBRG00000006783	trmt13	97	62.144	Neolamprologus_brichardi
ENSPLAG00000009709	trmt13	99	49.257	ENSNLEG00000035917	TRMT13	95	49.257	Nomascus_leucogenys
ENSPLAG00000009709	trmt13	55	47.154	ENSMEUG00000013346	-	95	47.154	Notamacropus_eugenii
ENSPLAG00000009709	trmt13	69	62.500	ENSOPRG00000012048	TRMT13	54	54.074	Ochotona_princeps
ENSPLAG00000009709	trmt13	99	67.834	ENSONIG00000004574	trmt13	99	67.834	Oreochromis_niloticus
ENSPLAG00000009709	trmt13	90	50.583	ENSOANG00000012057	TRMT13	96	50.583	Ornithorhynchus_anatinus
ENSPLAG00000009709	trmt13	99	47.974	ENSOCUG00000023095	TRMT13	96	47.974	Oryctolagus_cuniculus
ENSPLAG00000009709	trmt13	100	60.043	ENSORLG00000003320	trmt13	99	59.529	Oryzias_latipes
ENSPLAG00000009709	trmt13	99	61.538	ENSORLG00020005972	trmt13	97	61.538	Oryzias_latipes_hni
ENSPLAG00000009709	trmt13	100	66.667	ENSORLG00015002270	trmt13	99	66.667	Oryzias_latipes_hsok
ENSPLAG00000009709	trmt13	99	67.912	ENSOMEG00000006724	trmt13	94	67.912	Oryzias_melastigma
ENSPLAG00000009709	trmt13	99	48.626	ENSOGAG00000005618	TRMT13	93	48.626	Otolemur_garnettii
ENSPLAG00000009709	trmt13	99	48.203	ENSOARG00000017983	TRMT13	96	48.203	Ovis_aries
ENSPLAG00000009709	trmt13	99	49.469	ENSPPAG00000043736	TRMT13	95	49.469	Pan_paniscus
ENSPLAG00000009709	trmt13	99	48.408	ENSPPRG00000003424	TRMT13	98	48.951	Panthera_pardus
ENSPLAG00000009709	trmt13	99	48.408	ENSPTIG00000018598	TRMT13	98	48.951	Panthera_tigris_altaica
ENSPLAG00000009709	trmt13	99	49.364	ENSPTRG00000001001	TRMT13	96	49.364	Pan_troglodytes
ENSPLAG00000009709	trmt13	99	49.469	ENSPANG00000007598	TRMT13	95	49.469	Papio_anubis
ENSPLAG00000009709	trmt13	100	55.507	ENSPKIG00000001514	trmt13	98	55.507	Paramormyrops_kingsleyae
ENSPLAG00000009709	trmt13	89	50.000	ENSPSIG00000012703	TRMT13	99	50.000	Pelodiscus_sinensis
ENSPLAG00000009709	trmt13	100	57.860	ENSPMGG00000013298	trmt13	94	57.860	Periophthalmus_magnuspinnatus
ENSPLAG00000009709	trmt13	99	49.257	ENSPEMG00000000275	Trmt13	95	49.257	Peromyscus_maniculatus_bairdii
ENSPLAG00000009709	trmt13	99	48.117	ENSPMAG00000000823	trmt13	98	48.117	Petromyzon_marinus
ENSPLAG00000009709	trmt13	99	49.364	ENSPCIG00000007699	TRMT13	96	49.576	Phascolarctos_cinereus
ENSPLAG00000009709	trmt13	99	96.154	ENSPFOG00000008675	trmt13	95	96.154	Poecilia_formosa
ENSPLAG00000009709	trmt13	100	97.978	ENSPMEG00000022954	trmt13	100	97.978	Poecilia_mexicana
ENSPLAG00000009709	trmt13	84	95.479	ENSPREG00000005645	trmt13	95	86.364	Poecilia_reticulata
ENSPLAG00000009709	trmt13	98	49.465	ENSPPYG00000001120	TRMT13	95	49.465	Pongo_abelii
ENSPLAG00000009709	trmt13	99	48.723	ENSPCAG00000002340	TRMT13	95	48.723	Procavia_capensis
ENSPLAG00000009709	trmt13	99	49.469	ENSPCOG00000017984	TRMT13	95	49.469	Propithecus_coquereli
ENSPLAG00000009709	trmt13	99	48.195	ENSPVAG00000017430	TRMT13	95	48.195	Pteropus_vampyrus
ENSPLAG00000009709	trmt13	99	65.208	ENSPNYG00000013690	trmt13	99	65.208	Pundamilia_nyererei
ENSPLAG00000009709	trmt13	99	53.648	ENSPNAG00000022130	trmt13	98	53.648	Pygocentrus_nattereri
ENSPLAG00000009709	trmt13	99	49.471	ENSRNOG00000015140	Trmt13	93	49.471	Rattus_norvegicus
ENSPLAG00000009709	trmt13	99	49.469	ENSRBIG00000037686	TRMT13	95	49.469	Rhinopithecus_bieti
ENSPLAG00000009709	trmt13	99	49.469	ENSRROG00000044057	TRMT13	95	49.469	Rhinopithecus_roxellana
ENSPLAG00000009709	trmt13	99	49.149	ENSSBOG00000026541	TRMT13	95	49.149	Saimiri_boliviensis_boliviensis
ENSPLAG00000009709	trmt13	92	48.741	ENSSHAG00000005213	TRMT13	95	48.741	Sarcophilus_harrisii
ENSPLAG00000009709	trmt13	100	56.250	ENSSFOG00015017560	trmt13	98	56.250	Scleropages_formosus
ENSPLAG00000009709	trmt13	99	66.022	ENSSMAG00000014592	trmt13	96	66.022	Scophthalmus_maximus
ENSPLAG00000009709	trmt13	99	65.672	ENSSDUG00000015508	trmt13	96	65.817	Seriola_dumerili
ENSPLAG00000009709	trmt13	99	65.745	ENSSLDG00000019060	trmt13	96	65.745	Seriola_lalandi_dorsalis
ENSPLAG00000009709	trmt13	99	43.187	ENSSARG00000010344	TRMT13	98	43.187	Sorex_araneus
ENSPLAG00000009709	trmt13	98	49.676	ENSSPUG00000016339	TRMT13	98	49.676	Sphenodon_punctatus
ENSPLAG00000009709	trmt13	99	67.609	ENSSPAG00000011922	trmt13	99	67.749	Stegastes_partitus
ENSPLAG00000009709	trmt13	99	49.153	ENSSSCG00000006869	TRMT13	96	49.153	Sus_scrofa
ENSPLAG00000009709	trmt13	99	52.371	ENSTGUG00000005253	TRMT13	98	52.371	Taeniopygia_guttata
ENSPLAG00000009709	trmt13	99	63.111	ENSTRUG00000008400	trmt13	98	62.996	Takifugu_rubripes
ENSPLAG00000009709	trmt13	69	47.337	ENSTBEG00000008911	TRMT13	75	47.337	Tupaia_belangeri
ENSPLAG00000009709	trmt13	99	46.581	ENSUAMG00000017251	TRMT13	95	46.581	Ursus_americanus
ENSPLAG00000009709	trmt13	99	48.723	ENSUMAG00000007901	TRMT13	98	48.513	Ursus_maritimus
ENSPLAG00000009709	trmt13	77	61.224	ENSVPAG00000001034	TRMT13	83	61.224	Vicugna_pacos
ENSPLAG00000009709	trmt13	99	48.832	ENSVVUG00000021996	TRMT13	95	48.832	Vulpes_vulpes
ENSPLAG00000009709	trmt13	99	51.641	ENSXETG00000013204	trmt13	97	51.416	Xenopus_tropicalis
ENSPLAG00000009709	trmt13	100	94.607	ENSXMAG00000010765	trmt13	100	94.607	Xiphophorus_maculatus