EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000009840 (Gene tree)
Gene ID: 106961068
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 15905 bases
Position: chrKQ546576.1:143114-159018
Accession: 106961068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007377	NUC173	PF08161.12	2.8e-74	1	1
ENSPLAP00000007401	NUC173	PF08161.12	3e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004627	-	4729	XM_015054567	ENSPLAP00000007401	1290 (aa)	XP_014910053	UPI00072DE56D
ENSPLAT00000004668	-	3813	-	ENSPLAP00000007377	1270 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000009840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009840	rrp12	92	75.658	ENSG00000052749	RRP12	100	76.705	Homo_sapiens
ENSPLAG00000009840	rrp12	99	84.783	ENSAPOG00000013355	rrp12	99	84.837	Acanthochromis_polyacanthus
ENSPLAG00000009840	rrp12	99	63.259	ENSAMEG00000000134	RRP12	99	63.700	Ailuropoda_melanoleuca
ENSPLAG00000009840	rrp12	99	87.432	ENSACIG00000022673	rrp12	99	87.432	Amphilophus_citrinellus
ENSPLAG00000009840	rrp12	99	87.588	ENSAOCG00000016149	rrp12	99	87.588	Amphiprion_ocellaris
ENSPLAG00000009840	rrp12	99	86.070	ENSAPEG00000016023	rrp12	99	86.070	Amphiprion_percula
ENSPLAG00000009840	rrp12	99	86.516	ENSATEG00000022627	rrp12	99	86.516	Anabas_testudineus
ENSPLAG00000009840	rrp12	97	60.032	ENSAPLG00000014387	RRP12	99	60.385	Anas_platyrhynchos
ENSPLAG00000009840	rrp12	99	59.042	ENSACAG00000002175	RRP12	99	59.052	Anolis_carolinensis
ENSPLAG00000009840	rrp12	92	75.000	ENSANAG00000037485	RRP12	99	63.460	Aotus_nancymaae
ENSPLAG00000009840	rrp12	99	85.636	ENSACLG00000007354	rrp12	99	85.636	Astatotilapia_calliptera
ENSPLAG00000009840	rrp12	99	75.699	ENSAMXG00000012852	rrp12	99	75.781	Astyanax_mexicanus
ENSPLAG00000009840	rrp12	99	62.846	ENSBTAG00000002191	RRP12	99	63.052	Bos_taurus
ENSPLAG00000009840	rrp12	85	60.636	ENSCJAG00000016549	-	99	61.096	Callithrix_jacchus
ENSPLAG00000009840	rrp12	99	63.037	ENSCAFG00000009043	RRP12	99	63.186	Canis_familiaris
ENSPLAG00000009840	rrp12	99	63.037	ENSCAFG00020005991	RRP12	99	63.186	Canis_lupus_dingo
ENSPLAG00000009840	rrp12	99	60.550	ENSCHIG00000011876	RRP12	99	60.508	Capra_hircus
ENSPLAG00000009840	rrp12	53	55.603	ENSTSYG00000030210	-	98	56.232	Carlito_syrichta
ENSPLAG00000009840	rrp12	97	57.416	ENSCAPG00000008991	RRP12	97	57.556	Cavia_aperea
ENSPLAG00000009840	rrp12	100	62.818	ENSCPOG00000004215	RRP12	99	63.072	Cavia_porcellus
ENSPLAG00000009840	rrp12	81	66.174	ENSCCAG00000024088	RRP12	99	68.702	Cebus_capucinus
ENSPLAG00000009840	rrp12	70	58.132	ENSCCAG00000033123	-	82	58.260	Cebus_capucinus
ENSPLAG00000009840	rrp12	99	59.217	ENSCATG00000045310	RRP12	99	59.489	Cercocebus_atys
ENSPLAG00000009840	rrp12	100	62.385	ENSCLAG00000003753	RRP12	99	62.791	Chinchilla_lanigera
ENSPLAG00000009840	rrp12	88	61.304	ENSCSAG00000005877	RRP12	99	61.633	Chlorocebus_sabaeus
ENSPLAG00000009840	rrp12	59	70.736	ENSCHOG00000003095	-	60	70.736	Choloepus_hoffmanni
ENSPLAG00000009840	rrp12	94	65.157	ENSCPBG00000011935	RRP12	97	65.340	Chrysemys_picta_bellii
ENSPLAG00000009840	rrp12	64	39.953	ENSCSAVG00000006059	-	99	40.024	Ciona_savignyi
ENSPLAG00000009840	rrp12	92	75.658	ENSCANG00000031653	RRP12	99	63.721	Colobus_angolensis_palliatus
ENSPLAG00000009840	rrp12	90	62.852	ENSCGRG00001004338	Rrp12	99	63.208	Cricetulus_griseus_chok1gshd
ENSPLAG00000009840	rrp12	99	62.597	ENSCGRG00000011965	Rrp12	99	62.917	Cricetulus_griseus_crigri
ENSPLAG00000009840	rrp12	99	82.558	ENSCSEG00000007799	rrp12	99	82.917	Cynoglossus_semilaevis
ENSPLAG00000009840	rrp12	99	92.188	ENSCVAG00000003418	rrp12	99	92.266	Cyprinodon_variegatus
ENSPLAG00000009840	rrp12	99	73.354	ENSDARG00000022410	rrp12	99	73.791	Danio_rerio
ENSPLAG00000009840	rrp12	99	62.510	ENSDNOG00000005120	RRP12	99	62.568	Dasypus_novemcinctus
ENSPLAG00000009840	rrp12	99	62.471	ENSDORG00000009199	Rrp12	99	63.545	Dipodomys_ordii
ENSPLAG00000009840	rrp12	93	58.889	ENSETEG00000002455	RRP12	92	67.143	Echinops_telfairi
ENSPLAG00000009840	rrp12	88	60.000	ENSEBUG00000006555	rrp12	98	71.795	Eptatretus_burgeri
ENSPLAG00000009840	rrp12	99	63.251	ENSEASG00005008693	RRP12	99	63.693	Equus_asinus_asinus
ENSPLAG00000009840	rrp12	94	62.951	ENSECAG00000010892	RRP12	99	63.501	Equus_caballus
ENSPLAG00000009840	rrp12	69	52.107	ENSEEUG00000005447	-	64	57.647	Erinaceus_europaeus
ENSPLAG00000009840	rrp12	99	77.304	ENSELUG00000010510	rrp12	100	77.327	Esox_lucius
ENSPLAG00000009840	rrp12	92	75.658	ENSFCAG00000028639	RRP12	99	63.700	Felis_catus
ENSPLAG00000009840	rrp12	94	63.270	ENSFALG00000008458	RRP12	99	63.795	Ficedula_albicollis
ENSPLAG00000009840	rrp12	99	62.664	ENSFDAG00000019108	RRP12	95	62.946	Fukomys_damarensis
ENSPLAG00000009840	rrp12	99	82.761	ENSFHEG00000004148	rrp12	99	82.567	Fundulus_heteroclitus
ENSPLAG00000009840	rrp12	99	70.093	ENSGMOG00000004188	rrp12	99	70.661	Gadus_morhua
ENSPLAG00000009840	rrp12	99	63.426	ENSGALG00000041331	RRP12	96	64.646	Gallus_gallus
ENSPLAG00000009840	rrp12	100	96.822	ENSGAFG00000009038	rrp12	100	96.822	Gambusia_affinis
ENSPLAG00000009840	rrp12	99	83.528	ENSGACG00000007175	rrp12	99	83.528	Gasterosteus_aculeatus
ENSPLAG00000009840	rrp12	67	67.589	ENSGAGG00000019169	RRP12	96	67.589	Gopherus_agassizii
ENSPLAG00000009840	rrp12	92	75.658	ENSGGOG00000014850	RRP12	99	63.749	Gorilla_gorilla
ENSPLAG00000009840	rrp12	99	86.027	ENSHBUG00000023527	rrp12	99	86.027	Haplochromis_burtoni
ENSPLAG00000009840	rrp12	99	62.866	ENSHGLG00000016772	RRP12	99	63.150	Heterocephalus_glaber_female
ENSPLAG00000009840	rrp12	99	62.866	ENSHGLG00100015110	RRP12	99	63.150	Heterocephalus_glaber_male
ENSPLAG00000009840	rrp12	100	79.861	ENSHCOG00000019519	rrp12	99	79.938	Hippocampus_comes
ENSPLAG00000009840	rrp12	100	74.226	ENSIPUG00000000311	RRP12	99	74.337	Ictalurus_punctatus
ENSPLAG00000009840	rrp12	99	63.945	ENSSTOG00000006515	RRP12	99	64.059	Ictidomys_tridecemlineatus
ENSPLAG00000009840	rrp12	96	62.510	ENSJJAG00000000110	Rrp12	98	62.802	Jaculus_jaculus
ENSPLAG00000009840	rrp12	99	88.134	ENSKMAG00000020621	rrp12	99	88.134	Kryptolebias_marmoratus
ENSPLAG00000009840	rrp12	99	80.605	ENSLBEG00000015335	rrp12	99	81.187	Labrus_bergylta
ENSPLAG00000009840	rrp12	72	63.941	ENSLACG00000016633	RRP12	82	63.941	Latimeria_chalumnae
ENSPLAG00000009840	rrp12	100	69.908	ENSLOCG00000003846	rrp12	99	69.907	Lepisosteus_oculatus
ENSPLAG00000009840	rrp12	99	63.210	ENSLAFG00000015965	RRP12	99	63.341	Loxodonta_africana
ENSPLAG00000009840	rrp12	92	75.000	ENSMFAG00000041558	RRP12	99	63.643	Macaca_fascicularis
ENSPLAG00000009840	rrp12	92	75.000	ENSMMUG00000019634	RRP12	99	63.643	Macaca_mulatta
ENSPLAG00000009840	rrp12	92	75.000	ENSMNEG00000036759	RRP12	99	60.775	Macaca_nemestrina
ENSPLAG00000009840	rrp12	92	75.658	ENSMLEG00000041317	RRP12	99	60.924	Mandrillus_leucophaeus
ENSPLAG00000009840	rrp12	99	83.672	ENSMAMG00000002964	rrp12	99	86.190	Mastacembelus_armatus
ENSPLAG00000009840	rrp12	99	85.714	ENSMZEG00005003241	rrp12	99	85.714	Maylandia_zebra
ENSPLAG00000009840	rrp12	99	61.248	ENSMGAG00000009829	RRP12	99	61.521	Meleagris_gallopavo
ENSPLAG00000009840	rrp12	99	60.169	ENSMAUG00000020743	Rrp12	99	60.294	Mesocricetus_auratus
ENSPLAG00000009840	rrp12	92	77.124	ENSMICG00000007624	RRP12	99	63.566	Microcebus_murinus
ENSPLAG00000009840	rrp12	100	63.125	ENSMOCG00000006753	Rrp12	99	63.566	Microtus_ochrogaster
ENSPLAG00000009840	rrp12	100	82.262	ENSMMOG00000010708	rrp12	99	82.514	Mola_mola
ENSPLAG00000009840	rrp12	99	63.988	ENSMODG00000004315	RRP12	99	64.180	Monodelphis_domestica
ENSPLAG00000009840	rrp12	99	80.316	ENSMALG00000016560	rrp12	99	85.135	Monopterus_albus
ENSPLAG00000009840	rrp12	99	62.404	MGP_CAROLIEiJ_G0022957	Rrp12	99	62.606	Mus_caroli
ENSPLAG00000009840	rrp12	99	63.251	ENSMUSG00000035049	Rrp12	99	63.460	Mus_musculus
ENSPLAG00000009840	rrp12	100	63.125	MGP_PahariEiJ_G0014447	Rrp12	99	63.460	Mus_pahari
ENSPLAG00000009840	rrp12	99	63.328	MGP_SPRETEiJ_G0023878	Rrp12	99	63.538	Mus_spretus
ENSPLAG00000009840	rrp12	99	63.154	ENSMPUG00000017046	RRP12	99	63.439	Mustela_putorius_furo
ENSPLAG00000009840	rrp12	99	63.315	ENSMLUG00000017160	RRP12	99	63.629	Myotis_lucifugus
ENSPLAG00000009840	rrp12	99	63.636	ENSNGAG00000024144	Rrp12	99	63.848	Nannospalax_galili
ENSPLAG00000009840	rrp12	99	84.309	ENSNBRG00000009987	rrp12	99	84.309	Neolamprologus_brichardi
ENSPLAG00000009840	rrp12	99	55.111	ENSNLEG00000013762	RRP12	99	55.461	Nomascus_leucogenys
ENSPLAG00000009840	rrp12	100	58.237	ENSMEUG00000003185	RRP12	99	58.769	Notamacropus_eugenii
ENSPLAG00000009840	rrp12	94	67.391	ENSOPRG00000005001	RRP12	93	67.391	Ochotona_princeps
ENSPLAG00000009840	rrp12	100	62.645	ENSODEG00000016439	RRP12	99	62.822	Octodon_degus
ENSPLAG00000009840	rrp12	99	86.339	ENSONIG00000009528	rrp12	99	86.339	Oreochromis_niloticus
ENSPLAG00000009840	rrp12	100	59.401	ENSOANG00000006560	RRP12	99	59.551	Ornithorhynchus_anatinus
ENSPLAG00000009840	rrp12	99	62.500	ENSOCUG00000005662	RRP12	99	63.354	Oryctolagus_cuniculus
ENSPLAG00000009840	rrp12	99	85.480	ENSORLG00000008688	rrp12	99	85.690	Oryzias_latipes
ENSPLAG00000009840	rrp12	97	86.010	ENSORLG00020002355	rrp12	99	86.010	Oryzias_latipes_hni
ENSPLAG00000009840	rrp12	99	85.636	ENSORLG00015006709	rrp12	99	85.636	Oryzias_latipes_hsok
ENSPLAG00000009840	rrp12	97	86.010	ENSOMEG00000002609	rrp12	99	86.010	Oryzias_melastigma
ENSPLAG00000009840	rrp12	99	62.442	ENSOGAG00000001626	RRP12	99	62.490	Otolemur_garnettii
ENSPLAG00000009840	rrp12	99	62.135	ENSOARG00000009681	RRP12	99	62.336	Ovis_aries
ENSPLAG00000009840	rrp12	92	75.658	ENSPPAG00000043885	RRP12	99	61.735	Pan_paniscus
ENSPLAG00000009840	rrp12	92	75.000	ENSPPRG00000002029	RRP12	99	63.545	Panthera_pardus
ENSPLAG00000009840	rrp12	92	75.658	ENSPTIG00000004428	RRP12	99	60.903	Panthera_tigris_altaica
ENSPLAG00000009840	rrp12	92	75.658	ENSPTRG00000002806	RRP12	99	61.735	Pan_troglodytes
ENSPLAG00000009840	rrp12	92	75.658	ENSPANG00000021360	RRP12	99	63.876	Papio_anubis
ENSPLAG00000009840	rrp12	100	73.400	ENSPKIG00000016516	rrp12	99	73.582	Paramormyrops_kingsleyae
ENSPLAG00000009840	rrp12	99	81.279	ENSPMGG00000020217	rrp12	99	80.889	Periophthalmus_magnuspinnatus
ENSPLAG00000009840	rrp12	100	63.538	ENSPEMG00000008437	Rrp12	99	64.059	Peromyscus_maniculatus_bairdii
ENSPLAG00000009840	rrp12	99	46.637	ENSPMAG00000007493	rrp12	99	47.273	Petromyzon_marinus
ENSPLAG00000009840	rrp12	99	63.439	ENSPCIG00000002157	RRP12	99	63.523	Phascolarctos_cinereus
ENSPLAG00000009840	rrp12	100	99.612	ENSPFOG00000014975	rrp12	100	99.612	Poecilia_formosa
ENSPLAG00000009840	rrp12	100	99.457	ENSPMEG00000021871	rrp12	100	99.457	Poecilia_mexicana
ENSPLAG00000009840	rrp12	99	94.798	ENSPREG00000020950	rrp12	99	94.798	Poecilia_reticulata
ENSPLAG00000009840	rrp12	99	62.462	ENSPPYG00000002528	RRP12	99	62.742	Pongo_abelii
ENSPLAG00000009840	rrp12	94	77.401	ENSPCAG00000008967	RRP12	94	77.401	Procavia_capensis
ENSPLAG00000009840	rrp12	99	76.316	ENSPCOG00000014009	RRP12	99	63.608	Propithecus_coquereli
ENSPLAG00000009840	rrp12	99	60.354	ENSPVAG00000003370	RRP12	99	60.543	Pteropus_vampyrus
ENSPLAG00000009840	rrp12	99	86.105	ENSPNYG00000009451	rrp12	99	86.105	Pundamilia_nyererei
ENSPLAG00000009840	rrp12	94	85.455	ENSPNAG00000007658	rrp12	99	75.938	Pygocentrus_nattereri
ENSPLAG00000009840	rrp12	99	62.837	ENSRNOG00000048495	Rrp12	99	63.199	Rattus_norvegicus
ENSPLAG00000009840	rrp12	92	75.658	ENSRBIG00000021296	RRP12	99	63.643	Rhinopithecus_bieti
ENSPLAG00000009840	rrp12	92	75.658	ENSRROG00000032482	RRP12	99	63.566	Rhinopithecus_roxellana
ENSPLAG00000009840	rrp12	92	74.342	ENSSBOG00000030992	RRP12	99	74.342	Saimiri_boliviensis_boliviensis
ENSPLAG00000009840	rrp12	99	63.622	ENSSHAG00000018275	RRP12	99	63.891	Sarcophilus_harrisii
ENSPLAG00000009840	rrp12	99	75.407	ENSSFOG00015016400	rrp12	99	75.722	Scleropages_formosus
ENSPLAG00000009840	rrp12	99	84.766	ENSSMAG00000004047	rrp12	99	85.168	Scophthalmus_maximus
ENSPLAG00000009840	rrp12	99	87.198	ENSSDUG00000022871	rrp12	99	87.198	Seriola_dumerili
ENSPLAG00000009840	rrp12	99	87.041	ENSSLDG00000003038	rrp12	99	87.041	Seriola_lalandi_dorsalis
ENSPLAG00000009840	rrp12	100	61.308	ENSSPUG00000012221	RRP12	99	61.687	Sphenodon_punctatus
ENSPLAG00000009840	rrp12	99	87.744	ENSSPAG00000002261	rrp12	99	88.056	Stegastes_partitus
ENSPLAG00000009840	rrp12	100	62.356	ENSSSCG00000010514	RRP12	99	62.607	Sus_scrofa
ENSPLAG00000009840	rrp12	89	60.035	ENSTGUG00000009711	RRP12	99	60.755	Taeniopygia_guttata
ENSPLAG00000009840	rrp12	100	78.295	ENSTRUG00000012017	rrp12	99	78.298	Takifugu_rubripes
ENSPLAG00000009840	rrp12	100	83.114	ENSTNIG00000016522	rrp12	99	83.216	Tetraodon_nigroviridis
ENSPLAG00000009840	rrp12	77	72.549	ENSTBEG00000004907	RRP12	79	72.549	Tupaia_belangeri
ENSPLAG00000009840	rrp12	100	60.970	ENSTTRG00000009878	RRP12	99	61.580	Tursiops_truncatus
ENSPLAG00000009840	rrp12	99	63.546	ENSUAMG00000009092	RRP12	99	63.938	Ursus_americanus
ENSPLAG00000009840	rrp12	99	61.776	ENSUMAG00000021621	RRP12	99	62.315	Ursus_maritimus
ENSPLAG00000009840	rrp12	99	63.264	ENSVVUG00000023168	RRP12	99	63.207	Vulpes_vulpes
ENSPLAG00000009840	rrp12	99	65.116	ENSXETG00000003430	rrp12	99	65.289	Xenopus_tropicalis
ENSPLAG00000009840	rrp12	90	95.013	ENSXCOG00000012082	rrp12	97	95.021	Xiphophorus_couchianus
ENSPLAG00000009840	rrp12	100	96.434	ENSXMAG00000013498	rrp12	100	96.434	Xiphophorus_maculatus