EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000009861 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6811 bases
Position: chrKQ545858.1:282311-289121
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007501	zf-C2H2	PF00096.26	1e-24	1	5
ENSPLAP00000007501	zf-C2H2	PF00096.26	1e-24	2	5
ENSPLAP00000007501	zf-C2H2	PF00096.26	1e-24	3	5
ENSPLAP00000007501	zf-C2H2	PF00096.26	1e-24	4	5
ENSPLAP00000007501	zf-C2H2	PF00096.26	1e-24	5	5
ENSPLAP00000007501	zf-met	PF12874.7	5.9e-09	1	2
ENSPLAP00000007501	zf-met	PF12874.7	5.9e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004460	-	1317	-	ENSPLAP00000007501	438 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000009861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000009861	-	78	53.804	ENSPLAG00000014105	-	99	51.309
ENSPLAG00000009861	-	76	51.630	ENSPLAG00000021080	-	92	51.630
ENSPLAG00000009861	-	83	52.174	ENSPLAG00000011798	-	95	52.174
ENSPLAG00000009861	-	75	52.486	ENSPLAG00000004503	-	98	52.486
ENSPLAG00000009861	-	76	42.424	ENSPLAG00000016985	-	71	47.761
ENSPLAG00000009861	-	76	43.716	ENSPLAG00000009689	-	53	44.253
ENSPLAG00000009861	-	61	51.724	ENSPLAG00000016609	-	97	51.701
ENSPLAG00000009861	-	72	53.571	ENSPLAG00000010067	-	99	53.571
ENSPLAG00000009861	-	97	36.782	ENSPLAG00000010389	-	87	40.157
ENSPLAG00000009861	-	78	42.353	ENSPLAG00000009346	znf236	74	42.353
ENSPLAG00000009861	-	82	52.874	ENSPLAG00000006864	-	58	54.696
ENSPLAG00000009861	-	72	48.925	ENSPLAG00000023275	-	92	48.925
ENSPLAG00000009861	-	71	45.029	ENSPLAG00000010234	-	100	42.857
ENSPLAG00000009861	-	92	50.467	ENSPLAG00000021074	-	99	50.746
ENSPLAG00000009861	-	74	41.622	ENSPLAG00000010431	-	55	42.541
ENSPLAG00000009861	-	83	32.344	ENSPLAG00000010906	-	76	31.401
ENSPLAG00000009861	-	70	39.550	ENSPLAG00000018172	-	94	50.588
ENSPLAG00000009861	-	61	38.122	ENSPLAG00000000470	-	59	39.655
ENSPLAG00000009861	-	51	53.521	ENSPLAG00000017921	-	93	55.474
ENSPLAG00000009861	-	50	45.087	ENSPLAG00000016372	-	97	45.087
ENSPLAG00000009861	-	64	52.174	ENSPLAG00000005057	-	76	52.174
ENSPLAG00000009861	-	71	45.181	ENSPLAG00000002892	-	94	45.181
ENSPLAG00000009861	-	67	40.000	ENSPLAG00000004290	-	87	44.628
ENSPLAG00000009861	-	79	31.148	ENSPLAG00000010211	-	93	48.619
ENSPLAG00000009861	-	71	54.595	ENSPLAG00000016013	-	99	51.807
ENSPLAG00000009861	-	75	47.429	ENSPLAG00000015192	-	98	47.429
ENSPLAG00000009861	-	52	40.782	ENSPLAG00000022076	-	60	41.379
ENSPLAG00000009861	-	74	46.486	ENSPLAG00000013589	-	98	46.486
ENSPLAG00000009861	-	61	41.848	ENSPLAG00000016561	zgc:113348	93	43.363
ENSPLAG00000009861	-	84	52.299	ENSPLAG00000018468	-	98	53.804
ENSPLAG00000009861	-	50	48.214	ENSPLAG00000019142	-	94	48.214
ENSPLAG00000009861	-	82	52.000	ENSPLAG00000015617	-	93	52.000
ENSPLAG00000009861	-	73	40.764	ENSPLAG00000010448	-	51	46.067
ENSPLAG00000009861	-	75	43.243	ENSPLAG00000015958	-	97	43.243
ENSPLAG00000009861	-	79	55.056	ENSPLAG00000018436	-	91	53.684
ENSPLAG00000009861	-	83	52.174	ENSPLAG00000021050	-	85	52.174
ENSPLAG00000009861	-	84	41.148	ENSPLAG00000021057	-	96	41.148
ENSPLAG00000009861	-	85	37.415	ENSPLAG00000009651	-	91	46.154
ENSPLAG00000009861	-	83	53.804	ENSPLAG00000002838	-	99	54.891
ENSPLAG00000009861	-	84	51.149	ENSPLAG00000021218	-	93	51.149
ENSPLAG00000009861	-	55	44.000	ENSPLAG00000008691	-	72	46.821
ENSPLAG00000009861	-	64	43.662	ENSPLAG00000023077	-	63	43.662
ENSPLAG00000009861	-	66	51.765	ENSPLAG00000023074	-	97	51.765
ENSPLAG00000009861	-	61	42.197	ENSPLAG00000016662	-	87	42.021
ENSPLAG00000009861	-	64	40.000	ENSPLAG00000014660	-	97	40.000
ENSPLAG00000009861	-	82	42.604	ENSPLAG00000010379	-	73	42.604
ENSPLAG00000009861	-	55	36.310	ENSPLAG00000004027	-	75	41.104
ENSPLAG00000009861	-	81	40.252	ENSPLAG00000008557	-	92	42.529
ENSPLAG00000009861	-	77	47.183	ENSPLAG00000010230	-	58	47.183
ENSPLAG00000009861	-	77	45.977	ENSPLAG00000002691	-	86	45.977
ENSPLAG00000009861	-	70	50.299	ENSPLAG00000015992	-	95	51.087
ENSPLAG00000009861	-	76	52.174	ENSPLAG00000004448	-	92	51.316
ENSPLAG00000009861	-	71	56.250	ENSPLAG00000004443	-	76	45.122
ENSPLAG00000009861	-	68	47.778	ENSPLAG00000008529	-	98	45.506
ENSPLAG00000009861	-	60	43.671	ENSPLAG00000009847	-	73	43.671
ENSPLAG00000009861	-	73	39.091	ENSPLAG00000008610	-	86	39.091
ENSPLAG00000009861	-	53	41.361	ENSPLAG00000020698	-	82	42.424
ENSPLAG00000009861	-	74	39.896	ENSPLAG00000009568	-	94	39.896
ENSPLAG00000009861	-	69	52.381	ENSPLAG00000004034	-	67	53.261
ENSPLAG00000009861	-	52	45.294	ENSPLAG00000016384	-	91	45.455
ENSPLAG00000009861	-	60	49.730	ENSPLAG00000010869	-	94	49.704
ENSPLAG00000009861	-	50	48.649	ENSPLAG00000019073	-	79	48.649
ENSPLAG00000009861	-	76	33.103	ENSPLAG00000009870	-	95	32.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009861	-	53	41.736	ENSDARG00000115450	CABZ01012382.1	87	41.848	Danio_rerio
ENSPLAG00000009861	-	67	41.848	ENSDARG00000114437	zgc:173705	98	41.848	Danio_rerio
ENSPLAG00000009861	-	53	46.218	ENSDARG00000103495	zgc:173714	94	42.391	Danio_rerio
ENSPLAG00000009861	-	53	41.736	ENSDARG00000112725	si:dkey-22h13.2	87	41.322	Danio_rerio
ENSPLAG00000009861	-	53	41.765	ENSDARG00000109381	CU457778.2	87	42.391	Danio_rerio
ENSPLAG00000009861	-	67	50.811	ENSDARG00000102600	CABZ01003344.1	99	50.811	Danio_rerio
ENSPLAG00000009861	-	61	45.856	ENSDARG00000103244	CABZ01081752.3	98	45.856	Danio_rerio
ENSPLAG00000009861	-	53	41.736	ENSDARG00000100001	znf1096	87	41.848	Danio_rerio
ENSPLAG00000009861	-	53	48.913	ENSDARG00000116920	BX465848.2	71	48.913	Danio_rerio
ENSPLAG00000009861	-	53	41.202	ENSDARG00000096189	si:dkey-54j5.2	87	41.736	Danio_rerio
ENSPLAG00000009861	-	67	41.176	ENSDARG00000105137	zgc:173705	98	41.176	Danio_rerio
ENSPLAG00000009861	-	53	46.739	ENSDARG00000116177	znf1127	73	46.739	Danio_rerio
ENSPLAG00000009861	-	51	50.602	ENSFHEG00000021020	-	57	49.457	Fundulus_heteroclitus
ENSPLAG00000009861	-	51	36.702	ENSKMAG00000011441	-	64	37.681	Kryptolebias_marmoratus
ENSPLAG00000009861	-	64	41.071	ENSORLG00000012434	znf1064	77	42.857	Oryzias_latipes
ENSPLAG00000009861	-	63	32.281	ENSORLG00000024194	-	60	30.877	Oryzias_latipes
ENSPLAG00000009861	-	83	47.027	ENSPFOG00000003366	-	66	47.027	Poecilia_formosa
ENSPLAG00000009861	-	52	42.991	ENSPFOG00000005998	-	50	47.436	Poecilia_formosa
ENSPLAG00000009861	-	75	49.091	ENSPFOG00000022423	-	93	49.375	Poecilia_formosa
ENSPLAG00000009861	-	71	45.872	ENSPFOG00000023266	-	68	45.872	Poecilia_formosa
ENSPLAG00000009861	-	75	48.454	ENSPREG00000005015	-	90	58.333	Poecilia_reticulata
ENSPLAG00000009861	-	78	41.799	ENSXETG00000031310	-	70	45.109	Xenopus_tropicalis
ENSPLAG00000009861	-	71	44.253	ENSXCOG00000003499	-	95	47.414	Xiphophorus_couchianus