EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000009867 (Gene tree)
Gene ID: 106950972
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 19674 bases
Position: chrKQ545747.1:229382-249055
Accession: 106950972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024014	RNase_Zc3h12a	PF11977.8	2.5e-66	1	1
ENSPLAP00000024020	RNase_Zc3h12a	PF11977.8	2.5e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004446	-	5593	XM_015038180	ENSPLAP00000024014	932 (aa)	XP_014893666	UPI00072E7BBD
ENSPLAT00000004438	-	5610	XM_015038179	ENSPLAP00000024020	932 (aa)	XP_014893665	UPI00072E7BBD

Gene Model

Click here to download ENSPLAG00000009867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000009867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000009867	-	79	79.156	ENSAPOG00000015355	-	82	79.683	Acanthochromis_polyacanthus
ENSPLAG00000009867	-	84	47.698	ENSAPOG00000001632	-	84	65.385	Acanthochromis_polyacanthus
ENSPLAG00000009867	-	100	67.513	ENSACIG00000001362	-	97	69.198	Amphilophus_citrinellus
ENSPLAG00000009867	-	99	77.593	ENSAOCG00000003866	-	100	82.836	Amphiprion_ocellaris
ENSPLAG00000009867	-	73	75.398	ENSAPEG00000018582	-	99	84.211	Amphiprion_percula
ENSPLAG00000009867	-	100	72.338	ENSAPEG00000005727	-	99	84.211	Amphiprion_percula
ENSPLAG00000009867	-	99	42.928	ENSATEG00000002260	-	83	78.723	Anabas_testudineus
ENSPLAG00000009867	-	100	75.645	ENSATEG00000004134	-	100	76.780	Anabas_testudineus
ENSPLAG00000009867	-	100	75.437	ENSACLG00000027924	-	100	75.873	Astatotilapia_calliptera
ENSPLAG00000009867	-	64	53.746	ENSACLG00000018493	-	99	44.637	Astatotilapia_calliptera
ENSPLAG00000009867	-	87	72.861	ENSCSEG00000010073	-	96	80.427	Cynoglossus_semilaevis
ENSPLAG00000009867	-	64	50.784	ENSCSEG00000008542	-	66	51.917	Cynoglossus_semilaevis
ENSPLAG00000009867	-	100	84.038	ENSCVAG00000002328	-	100	83.827	Cyprinodon_variegatus
ENSPLAG00000009867	-	64	54.823	ENSELUG00000005470	-	100	45.812	Esox_lucius
ENSPLAG00000009867	-	85	55.474	ENSELUG00000009319	-	95	54.590	Esox_lucius
ENSPLAG00000009867	-	92	91.837	ENSFHEG00000021225	-	100	91.837	Fundulus_heteroclitus
ENSPLAG00000009867	-	73	44.892	ENSGMOG00000017975	-	100	45.324	Gadus_morhua
ENSPLAG00000009867	-	100	92.612	ENSGAFG00000005290	-	100	92.184	Gambusia_affinis
ENSPLAG00000009867	-	73	69.388	ENSGACG00000014201	-	100	70.554	Gasterosteus_aculeatus
ENSPLAG00000009867	-	73	45.084	ENSGACG00000001339	-	99	45.138	Gasterosteus_aculeatus
ENSPLAG00000009867	-	100	75.231	ENSHBUG00000006831	-	100	75.770	Haplochromis_burtoni
ENSPLAG00000009867	-	100	61.035	ENSHCOG00000008878	-	100	60.232	Hippocampus_comes
ENSPLAG00000009867	-	100	78.072	ENSKMAG00000011694	-	100	78.496	Kryptolebias_marmoratus
ENSPLAG00000009867	-	86	45.600	ENSLBEG00000012710	-	99	44.300	Labrus_bergylta
ENSPLAG00000009867	-	97	74.542	ENSLBEG00000012554	-	99	78.473	Labrus_bergylta
ENSPLAG00000009867	-	100	74.768	ENSLBEG00000003547	-	100	74.819	Labrus_bergylta
ENSPLAG00000009867	-	51	57.606	ENSLACG00000017365	ZC3H12A	58	60.870	Latimeria_chalumnae
ENSPLAG00000009867	-	99	44.198	ENSMAMG00000020372	-	99	44.020	Mastacembelus_armatus
ENSPLAG00000009867	-	97	70.714	ENSMAMG00000021794	-	94	88.235	Mastacembelus_armatus
ENSPLAG00000009867	-	100	75.437	ENSMZEG00005007718	-	100	75.873	Maylandia_zebra
ENSPLAG00000009867	-	64	53.746	ENSMZEG00005019137	-	90	67.532	Maylandia_zebra
ENSPLAG00000009867	-	94	73.073	ENSMMOG00000005728	-	98	78.837	Mola_mola
ENSPLAG00000009867	-	87	48.057	ENSMMOG00000019526	-	93	43.756	Mola_mola
ENSPLAG00000009867	-	100	73.347	ENSMALG00000010501	-	100	74.043	Monopterus_albus
ENSPLAG00000009867	-	64	52.202	ENSNBRG00000012175	-	90	68.182	Neolamprologus_brichardi
ENSPLAG00000009867	-	100	75.334	ENSNBRG00000006978	-	100	75.770	Neolamprologus_brichardi
ENSPLAG00000009867	-	100	75.359	ENSONIG00000012268	-	100	76.000	Oreochromis_niloticus
ENSPLAG00000009867	-	100	64.637	ENSORLG00000029243	-	99	79.545	Oryzias_latipes
ENSPLAG00000009867	-	100	72.843	ENSORLG00020017005	-	100	73.163	Oryzias_latipes_hni
ENSPLAG00000009867	-	100	72.370	ENSORLG00015015211	-	100	72.881	Oryzias_latipes_hsok
ENSPLAG00000009867	-	100	72.088	ENSOMEG00000006666	-	100	73.890	Oryzias_melastigma
ENSPLAG00000009867	-	57	57.434	ENSPMGG00000020126	-	52	59.819	Periophthalmus_magnuspinnatus
ENSPLAG00000009867	-	65	78.730	ENSPMGG00000009790	-	95	81.271	Periophthalmus_magnuspinnatus
ENSPLAG00000009867	-	100	98.391	ENSPMEG00000006624	-	100	98.391	Poecilia_mexicana
ENSPLAG00000009867	-	99	44.139	ENSPMEG00000011676	-	50	59.915	Poecilia_mexicana
ENSPLAG00000009867	-	100	97.210	ENSPREG00000010838	-	100	97.210	Poecilia_reticulata
ENSPLAG00000009867	-	98	43.852	ENSPREG00000001607	-	73	78.855	Poecilia_reticulata
ENSPLAG00000009867	-	100	75.182	ENSSMAG00000007545	-	100	75.597	Scophthalmus_maximus
ENSPLAG00000009867	-	99	43.605	ENSSMAG00000007258	-	99	43.652	Scophthalmus_maximus
ENSPLAG00000009867	-	99	43.944	ENSSDUG00000013237	-	90	66.000	Seriola_dumerili
ENSPLAG00000009867	-	100	76.844	ENSSDUG00000021864	-	100	77.254	Seriola_dumerili
ENSPLAG00000009867	-	99	44.980	ENSSLDG00000004886	-	99	44.838	Seriola_lalandi_dorsalis
ENSPLAG00000009867	-	100	76.639	ENSSLDG00000012268	-	100	77.049	Seriola_lalandi_dorsalis
ENSPLAG00000009867	-	99	45.854	ENSSPAG00000001850	-	99	44.323	Stegastes_partitus
ENSPLAG00000009867	-	100	76.278	ENSSPAG00000009485	-	100	77.128	Stegastes_partitus
ENSPLAG00000009867	-	99	71.651	ENSTRUG00000022519	-	99	72.193	Takifugu_rubripes
ENSPLAG00000009867	-	74	67.857	ENSTNIG00000014519	-	100	82.979	Tetraodon_nigroviridis
ENSPLAG00000009867	-	99	44.537	ENSXMAG00000014715	-	83	80.349	Xiphophorus_maculatus
ENSPLAG00000009867	-	100	95.494	ENSXMAG00000027171	-	100	95.494	Xiphophorus_maculatus