EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000010029 (Gene tree)
Gene ID: 106961837
Gene Symbol: si:ch211-244b2.4
Alias: -
Full Name: uncharacterized LOC106961837
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4168 bases
Position: chrKQ546656.1:82909-87076
Accession: 106961837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024099	zf-CCCH	PF00642.24	8.1e-10	1	2
ENSPLAP00000024099	zf-CCCH	PF00642.24	8.1e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004227	-	1774	XM_015055893	ENSPLAP00000024099	361 (aa)	XP_014911379	UPI00072D9560

Gene Model

Click here to download ENSPLAG00000010029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010029	si:ch211-244b2.4	100	64.917	ENSAPEG00000007620	si:ch211-244b2.4	90	66.873	Amphiprion_percula
ENSPLAG00000010029	si:ch211-244b2.4	96	58.496	ENSACLG00000022403	si:ch211-244b2.4	88	63.291	Astatotilapia_calliptera
ENSPLAG00000010029	si:ch211-244b2.4	100	72.928	ENSFHEG00000004642	si:ch211-244b2.4	90	73.994	Fundulus_heteroclitus
ENSPLAG00000010029	si:ch211-244b2.4	96	59.155	ENSHBUG00000019440	si:ch211-244b2.4	89	63.291	Haplochromis_burtoni
ENSPLAG00000010029	si:ch211-244b2.4	64	68.103	ENSKMAG00000009331	si:ch211-244b2.4	71	70.647	Kryptolebias_marmoratus
ENSPLAG00000010029	si:ch211-244b2.4	100	61.509	ENSLBEG00000016973	si:ch211-244b2.4	90	60.308	Labrus_bergylta
ENSPLAG00000010029	si:ch211-244b2.4	87	43.034	ENSLACG00000012806	-	100	42.724	Latimeria_chalumnae
ENSPLAG00000010029	si:ch211-244b2.4	96	57.851	ENSMZEG00005005397	si:ch211-244b2.4	87	63.291	Maylandia_zebra
ENSPLAG00000010029	si:ch211-244b2.4	90	49.565	ENSNBRG00000007103	si:ch211-244b2.4	82	53.691	Neolamprologus_brichardi
ENSPLAG00000010029	si:ch211-244b2.4	100	55.372	ENSORLG00000015345	si:ch211-244b2.4	87	59.937	Oryzias_latipes
ENSPLAG00000010029	si:ch211-244b2.4	96	56.358	ENSORLG00020013462	si:ch211-244b2.4	87	59.306	Oryzias_latipes_hni
ENSPLAG00000010029	si:ch211-244b2.4	100	55.372	ENSORLG00015011985	si:ch211-244b2.4	87	59.937	Oryzias_latipes_hsok
ENSPLAG00000010029	si:ch211-244b2.4	99	57.341	ENSOMEG00000006058	si:ch211-244b2.4	89	60.883	Oryzias_melastigma
ENSPLAG00000010029	si:ch211-244b2.4	99	99.157	ENSPFOG00000008262	si:ch211-244b2.4	99	99.157	Poecilia_formosa
ENSPLAG00000010029	si:ch211-244b2.4	100	97.230	ENSPMEG00000020729	si:ch211-244b2.4	100	97.230	Poecilia_mexicana
ENSPLAG00000010029	si:ch211-244b2.4	93	80.000	ENSPREG00000001561	si:ch211-244b2.4	92	78.261	Poecilia_reticulata
ENSPLAG00000010029	si:ch211-244b2.4	95	58.989	ENSPNYG00000001424	si:ch211-244b2.4	87	63.291	Pundamilia_nyererei
ENSPLAG00000010029	si:ch211-244b2.4	89	60.870	ENSSMAG00000002425	si:ch211-244b2.4	90	60.870	Scophthalmus_maximus