EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000010104 (Gene tree)
Gene ID: 106940052
Gene Symbol: rab18a
Alias: -
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8537 bases
Position: chrKQ548350.1:68988-77524
Accession: 106940052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007692	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000004143	-	2271	XM_015022679	ENSPLAP00000007692	204 (aa)	XP_014878165	UPI0004444590
ENSPLAT00000004158	-	543	-	ENSPLAP00000007676	180 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000010104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000010104	rab18a	75	39.355	ENSPLAG00000019688	si:dkey-13a21.4	76	39.355
ENSPLAG00000010104	rab18a	80	48.780	ENSPLAG00000004551	-	76	48.780
ENSPLAG00000010104	rab18a	93	46.193	ENSPLAG00000018655	rab1ba	80	50.617
ENSPLAG00000010104	rab18a	84	38.728	ENSPLAG00000007237	RAB39B	81	38.728
ENSPLAG00000010104	rab18a	79	37.952	ENSPLAG00000022926	rab9a	82	37.952
ENSPLAG00000010104	rab18a	79	47.561	ENSPLAG00000013594	rab12	67	47.561
ENSPLAG00000010104	rab18a	82	44.643	ENSPLAG00000006354	rab15	77	44.643
ENSPLAG00000010104	rab18a	80	39.286	ENSPLAG00000002799	RAB7A	81	39.286
ENSPLAG00000010104	rab18a	95	44.928	ENSPLAG00000023374	rab2a	78	51.205
ENSPLAG00000010104	rab18a	79	31.928	ENSPLAG00000008845	dnajc27	61	31.928
ENSPLAG00000010104	rab18a	77	32.716	ENSPLAG00000001529	rheb	86	32.716
ENSPLAG00000010104	rab18a	80	41.212	ENSPLAG00000005628	rab42a	76	41.212
ENSPLAG00000010104	rab18a	79	46.296	ENSPLAG00000001598	rab11bb	74	46.296
ENSPLAG00000010104	rab18a	79	36.145	ENSPLAG00000011866	rab9b	75	36.145
ENSPLAG00000010104	rab18a	75	33.974	ENSPLAG00000005074	rab34b	61	33.974
ENSPLAG00000010104	rab18a	75	52.903	ENSPLAG00000005869	zgc:171927	72	52.903
ENSPLAG00000010104	rab18a	84	48.256	ENSPLAG00000020989	rab35b	85	48.256
ENSPLAG00000010104	rab18a	80	41.212	ENSPLAG00000018718	rab22a	85	41.212
ENSPLAG00000010104	rab18a	86	30.726	ENSPLAG00000016748	RHEB	86	32.121
ENSPLAG00000010104	rab18a	79	45.679	ENSPLAG00000011175	rab11a	76	45.912
ENSPLAG00000010104	rab18a	79	46.296	ENSPLAG00000014207	-	74	46.296
ENSPLAG00000010104	rab18a	79	45.062	ENSPLAG00000008004	rab25b	76	45.062
ENSPLAG00000010104	rab18a	72	43.137	ENSPLAG00000016172	-	63	43.137
ENSPLAG00000010104	rab18a	83	39.766	ENSPLAG00000000376	rab41	79	39.766
ENSPLAG00000010104	rab18a	87	38.547	ENSPLAG00000019570	rab6a	84	38.547
ENSPLAG00000010104	rab18a	77	30.864	ENSPLAG00000015650	rhebl1	85	30.864
ENSPLAG00000010104	rab18a	79	46.626	ENSPLAG00000005832	RAB13	87	46.626
ENSPLAG00000010104	rab18a	83	39.181	ENSPLAG00000019707	rab6bb	80	39.181
ENSPLAG00000010104	rab18a	86	36.313	ENSPLAG00000015685	rabl2	80	36.313
ENSPLAG00000010104	rab18a	96	39.713	ENSPLAG00000007986	rab11al	85	42.391
ENSPLAG00000010104	rab18a	93	46.154	ENSPLAG00000015592	-	85	49.711
ENSPLAG00000010104	rab18a	66	35.556	ENSPLAG00000019120	-	68	35.556
ENSPLAG00000010104	rab18a	79	37.952	ENSPLAG00000007015	rab9a	78	37.952
ENSPLAG00000010104	rab18a	84	38.506	ENSPLAG00000011697	rab23	75	39.103
ENSPLAG00000010104	rab18a	71	40.136	ENSPLAG00000020627	zgc:101559	63	40.136
ENSPLAG00000010104	rab18a	73	35.333	ENSPLAG00000009163	rras	82	35.802
ENSPLAG00000010104	rab18a	89	43.407	ENSPLAG00000016333	-	80	43.407
ENSPLAG00000010104	rab18a	85	34.659	ENSPLAG00000022991	rab34a	63	34.659
ENSPLAG00000010104	rab18a	57	31.034	ENSPLAG00000002394	arl5c	62	31.034
ENSPLAG00000010104	rab18a	81	32.530	ENSPLAG00000009352	KRAS	93	32.000
ENSPLAG00000010104	rab18a	80	43.713	ENSPLAG00000007773	si:dkey-34d22.5	75	43.713
ENSPLAG00000010104	rab18a	80	43.636	ENSPLAG00000004790	rab5c	81	41.667
ENSPLAG00000010104	rab18a	99	84.314	ENSPLAG00000019136	rab18b	93	85.340
ENSPLAG00000010104	rab18a	80	38.095	ENSPLAG00000006777	-	76	38.095
ENSPLAG00000010104	rab18a	80	41.212	ENSPLAG00000017232	rab22a	89	41.718
ENSPLAG00000010104	rab18a	95	47.449	ENSPLAG00000006520	rab1ab	90	49.180
ENSPLAG00000010104	rab18a	89	44.022	ENSPLAG00000014563	rab4a	86	44.022
ENSPLAG00000010104	rab18a	83	40.351	ENSPLAG00000022260	rab6ba	80	40.351
ENSPLAG00000010104	rab18a	80	37.725	ENSPLAG00000001065	-	81	37.725
ENSPLAG00000010104	rab18a	80	40.828	ENSPLAG00000021278	rab33ba	70	40.828
ENSPLAG00000010104	rab18a	80	46.341	ENSPLAG00000021043	si:dkey-16l2.16	78	46.341
ENSPLAG00000010104	rab18a	80	47.879	ENSPLAG00000022515	-	76	47.879
ENSPLAG00000010104	rab18a	81	32.530	ENSPLAG00000003379	hrasb	87	32.530
ENSPLAG00000010104	rab18a	90	41.799	ENSPLAG00000017838	rab5aa	86	41.799
ENSPLAG00000010104	rab18a	82	35.882	ENSPLAG00000011855	si:ch73-116o1.2	81	35.882
ENSPLAG00000010104	rab18a	84	50.867	ENSPLAG00000015383	rab30	84	50.867
ENSPLAG00000010104	rab18a	82	42.604	ENSPLAG00000023128	RAB15	79	42.604
ENSPLAG00000010104	rab18a	83	40.116	ENSPLAG00000018322	-	81	40.116
ENSPLAG00000010104	rab18a	71	44.218	ENSPLAG00000005189	rab33a	65	44.218
ENSPLAG00000010104	rab18a	79	34.731	ENSPLAG00000002600	RAB29	78	34.731
ENSPLAG00000010104	rab18a	79	43.827	ENSPLAG00000003558	rab25a	75	43.827
ENSPLAG00000010104	rab18a	88	43.784	ENSPLAG00000003181	-	90	43.784
ENSPLAG00000010104	rab18a	79	46.296	ENSPLAG00000014243	rab11ba	75	45.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010104	rab18a	100	95.098	ENSAPOG00000010760	rab18a	94	96.335	Acanthochromis_polyacanthus
ENSPLAG00000010104	rab18a	100	84.314	ENSACIG00000009617	rab18a	93	84.817	Amphilophus_citrinellus
ENSPLAG00000010104	rab18a	100	95.588	ENSAOCG00000016233	rab18a	94	96.859	Amphiprion_ocellaris
ENSPLAG00000010104	rab18a	100	95.588	ENSAPEG00000005392	rab18a	94	96.859	Amphiprion_percula
ENSPLAG00000010104	rab18a	100	93.627	ENSATEG00000021911	rab18a	94	94.764	Anabas_testudineus
ENSPLAG00000010104	rab18a	100	87.317	ENSACAG00000005463	-	94	88.542	Anolis_carolinensis
ENSPLAG00000010104	rab18a	100	95.098	ENSACLG00000011484	rab18a	100	95.098	Astatotilapia_calliptera
ENSPLAG00000010104	rab18a	100	86.893	ENSCPBG00000015839	-	93	87.958	Chrysemys_picta_bellii
ENSPLAG00000010104	rab18a	96	69.154	ENSCPBG00000027619	-	94	70.899	Chrysemys_picta_bellii
ENSPLAG00000010104	rab18a	97	74.874	ENSCING00000006838	-	90	79.444	Ciona_intestinalis
ENSPLAG00000010104	rab18a	97	73.869	ENSCSAVG00000010348	-	94	76.064	Ciona_savignyi
ENSPLAG00000010104	rab18a	100	93.627	ENSCSEG00000011816	rab18a	94	95.288	Cynoglossus_semilaevis
ENSPLAG00000010104	rab18a	100	97.549	ENSCVAG00000015451	rab18a	100	97.549	Cyprinodon_variegatus
ENSPLAG00000010104	rab18a	100	81.463	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSPLAG00000010104	rab18a	100	89.756	ENSELUG00000003805	rab18a	93	91.623	Esox_lucius
ENSPLAG00000010104	rab18a	100	97.549	ENSFHEG00000019455	rab18a	100	97.549	Fundulus_heteroclitus
ENSPLAG00000010104	rab18a	100	99.020	ENSGAFG00000002790	rab18a	100	99.020	Gambusia_affinis
ENSPLAG00000010104	rab18a	100	86.893	ENSGAGG00000015642	-	93	87.958	Gopherus_agassizii
ENSPLAG00000010104	rab18a	100	95.098	ENSHBUG00000001518	rab18a	100	95.098	Haplochromis_burtoni
ENSPLAG00000010104	rab18a	99	95.074	ENSLBEG00000005861	rab18a	90	95.812	Labrus_bergylta
ENSPLAG00000010104	rab18a	93	88.421	ENSLACG00000009310	rab18a	92	88.421	Latimeria_chalumnae
ENSPLAG00000010104	rab18a	100	88.780	ENSLOCG00000007491	rab18a	93	90.052	Lepisosteus_oculatus
ENSPLAG00000010104	rab18a	100	92.157	ENSMAMG00000014320	rab18a	94	93.717	Mastacembelus_armatus
ENSPLAG00000010104	rab18a	100	94.608	ENSMZEG00005017235	rab18a	94	96.335	Maylandia_zebra
ENSPLAG00000010104	rab18a	100	94.118	ENSMALG00000009813	rab18a	94	95.288	Monopterus_albus
ENSPLAG00000010104	rab18a	100	95.098	ENSNBRG00000013507	rab18a	100	95.098	Neolamprologus_brichardi
ENSPLAG00000010104	rab18a	94	96.354	ENSORLG00000004624	rab18a	94	96.335	Oryzias_latipes
ENSPLAG00000010104	rab18a	94	96.875	ENSORLG00020008333	rab18a	94	96.859	Oryzias_latipes_hni
ENSPLAG00000010104	rab18a	94	95.833	ENSORLG00015004739	rab18a	94	95.812	Oryzias_latipes_hsok
ENSPLAG00000010104	rab18a	100	95.588	ENSOMEG00000020605	rab18a	100	95.588	Oryzias_melastigma
ENSPLAG00000010104	rab18a	100	88.293	ENSPKIG00000009825	rab18a	92	90.476	Paramormyrops_kingsleyae
ENSPLAG00000010104	rab18a	100	93.627	ENSPMGG00000020409	-	94	94.241	Periophthalmus_magnuspinnatus
ENSPLAG00000010104	rab18a	100	100.000	ENSPFOG00000007571	rab18a	100	100.000	Poecilia_formosa
ENSPLAG00000010104	rab18a	100	100.000	ENSPMEG00000013085	rab18a	100	100.000	Poecilia_mexicana
ENSPLAG00000010104	rab18a	100	100.000	ENSPREG00000005923	rab18a	83	100.000	Poecilia_reticulata
ENSPLAG00000010104	rab18a	100	95.098	ENSPNYG00000007064	rab18a	100	95.098	Pundamilia_nyererei
ENSPLAG00000010104	rab18a	99	80.597	ENSPNAG00000011548	rab18a	95	83.684	Pygocentrus_nattereri
ENSPLAG00000010104	rab18a	100	89.268	ENSSFOG00015017444	rab18a	78	91.579	Scleropages_formosus
ENSPLAG00000010104	rab18a	94	92.746	ENSSMAG00000002969	rab18a	94	92.708	Scophthalmus_maximus
ENSPLAG00000010104	rab18a	94	95.312	ENSSDUG00000003823	rab18a	94	95.288	Seriola_dumerili
ENSPLAG00000010104	rab18a	94	95.312	ENSSLDG00000006977	rab18a	94	95.288	Seriola_lalandi_dorsalis
ENSPLAG00000010104	rab18a	93	88.889	ENSSPUG00000017677	-	92	88.421	Sphenodon_punctatus
ENSPLAG00000010104	rab18a	100	91.176	ENSTRUG00000004984	rab18a	94	92.147	Takifugu_rubripes
ENSPLAG00000010104	rab18a	100	88.350	ENSUMAG00000015574	-	91	89.894	Ursus_maritimus
ENSPLAG00000010104	rab18a	100	86.893	ENSXETG00000004556	rab18	93	89.529	Xenopus_tropicalis
ENSPLAG00000010104	rab18a	100	99.510	ENSXMAG00000024122	rab18a	100	99.510	Xiphophorus_maculatus