EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000010112 (Gene tree)
Gene ID
106951735
Gene Symbol
pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Minus strand
Length
10456 bases
Position
chrKQ545786.1:293453-303908
Accession
106951735
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000024155PABPPF00658.185.4e-3111
ENSPLAP00000024155RRM_5PF13893.61.4e-0911
ENSPLAP00000024155RRM_1PF00076.221.4e-9014
ENSPLAP00000024155RRM_1PF00076.221.4e-9024
ENSPLAP00000024155RRM_1PF00076.221.4e-9034
ENSPLAP00000024155RRM_1PF00076.221.4e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000004097-2224XM_015039421ENSPLAP00000024155626 (aa)XP_014894907UPI00072E5576
Gene Model
Click here to download ENSPLAG00000010112's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010112's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000010112pabpc45840.437ENSPLAG00000001401sf3b45040.437
ENSPLAG00000010112pabpc46283.846ENSPLAG00000023686-9383.846
ENSPLAG00000010112pabpc49876.153ENSPLAG00000001388pabpc1b9976.471
ENSPLAG00000010112pabpc46532.000ENSPLAG00000000059rbm196432.000
ENSPLAG00000010112pabpc46036.145ENSPLAG00000005203ELAVL29234.940
ENSPLAG00000010112pabpc45930.168ENSPLAG00000015480trnau1apb5430.168
ENSPLAG00000010112pabpc49877.107ENSPLAG00000004114pabpc1a9876.433
ENSPLAG00000010112pabpc45934.940ENSPLAG00000008085elavl48734.940
ENSPLAG00000010112pabpc49867.670ENSPLAG00000017490-10067.675
ENSPLAG00000010112pabpc45832.450ENSPLAG00000020810ELAVL19931.522
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000010112pabpc410084.848ENSG00000090621PABPC410094.574Homo_sapiens
ENSPLAG00000010112pabpc410096.166ENSAPOG00000001161pabpc49996.166Acanthochromis_polyacanthus
ENSPLAG00000010112pabpc410080.240ENSAMEG00000011535-10079.042Ailuropoda_melanoleuca
ENSPLAG00000010112pabpc49849.678ENSAMEG00000015083-9948.071Ailuropoda_melanoleuca
ENSPLAG00000010112pabpc410095.246ENSACIG00000023343pabpc49995.246Amphilophus_citrinellus
ENSPLAG00000010112pabpc49996.278ENSAOCG00000021529pabpc49996.006Amphiprion_ocellaris
ENSPLAG00000010112pabpc49996.278ENSAPEG00000019196pabpc49996.006Amphiprion_percula
ENSPLAG00000010112pabpc49995.477ENSATEG00000007402pabpc49995.056Anabas_testudineus
ENSPLAG00000010112pabpc49985.669ENSAPLG00000009729-10084.409Anas_platyrhynchos
ENSPLAG00000010112pabpc49885.106ENSACAG00000002544PABPC410083.688Anolis_carolinensis
ENSPLAG00000010112pabpc410083.178ENSANAG00000025079PABPC410082.473Aotus_nancymaae
ENSPLAG00000010112pabpc410096.006ENSACLG00000019558pabpc49996.006Astatotilapia_calliptera
ENSPLAG00000010112pabpc49986.054ENSAMXG00000018779pabpc49985.420Astyanax_mexicanus
ENSPLAG00000010112pabpc45883.832ENSBTAG00000048536-9383.832Bos_taurus
ENSPLAG00000010112pabpc410081.957ENSBTAG00000017125PABPC410080.734Bos_taurus
ENSPLAG00000010112pabpc47480.804ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSPLAG00000010112pabpc410083.178ENSCJAG00000002512-10082.473Callithrix_jacchus
ENSPLAG00000010112pabpc410083.333ENSCAFG00000003081PABPC410082.786Canis_familiaris
ENSPLAG00000010112pabpc410080.389ENSCAFG00020004161PABPC410079.192Canis_lupus_dingo
ENSPLAG00000010112pabpc410065.224ENSCHIG00000023385-10064.297Capra_hircus
ENSPLAG00000010112pabpc410080.240ENSCHIG00000019398-10078.892Capra_hircus
ENSPLAG00000010112pabpc410083.725ENSTSYG00000006532PABPC410082.629Carlito_syrichta
ENSPLAG00000010112pabpc49983.040ENSCAPG00000015984PABPC410081.949Cavia_aperea
ENSPLAG00000010112pabpc410083.230ENSCPOG00000009552PABPC410082.629Cavia_porcellus
ENSPLAG00000010112pabpc410083.178ENSCCAG00000037306PABPC410082.629Cebus_capucinus
ENSPLAG00000010112pabpc410083.333ENSCATG00000042164PABPC410082.629Cercocebus_atys
ENSPLAG00000010112pabpc410083.075ENSCLAG00000011899PABPC410082.629Chinchilla_lanigera
ENSPLAG00000010112pabpc410080.389ENSCSAG00000001135PABPC410079.042Chlorocebus_sabaeus
ENSPLAG00000010112pabpc48789.211ENSCHOG00000005327PABPC47989.757Choloepus_hoffmanni
ENSPLAG00000010112pabpc49986.299ENSCPBG00000001038PABPC410085.039Chrysemys_picta_bellii
ENSPLAG00000010112pabpc49983.570ENSCANG00000034177PABPC410082.857Colobus_angolensis_palliatus
ENSPLAG00000010112pabpc49885.041ENSCGRG00001018166Pabpc410083.439Cricetulus_griseus_chok1gshd
ENSPLAG00000010112pabpc49785.314ENSCGRG00000009777Pabpc410083.683Cricetulus_griseus_crigri
ENSPLAG00000010112pabpc410094.896ENSCSEG00000000130pabpc410094.896Cynoglossus_semilaevis
ENSPLAG00000010112pabpc49998.539ENSCVAG00000019246pabpc410098.539Cyprinodon_variegatus
ENSPLAG00000010112pabpc49892.026ENSDARG00000059259pabpc410091.736Danio_rerio
ENSPLAG00000010112pabpc49982.312ENSDNOG00000018444-10081.514Dasypus_novemcinctus
ENSPLAG00000010112pabpc410081.985ENSDORG00000011581Pabpc410080.858Dipodomys_ordii
ENSPLAG00000010112pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSPLAG00000010112pabpc48554.562ENSETEG00000009172-9952.793Echinops_telfairi
ENSPLAG00000010112pabpc49777.561ENSEBUG00000013782pabpc49976.752Eptatretus_burgeri
ENSPLAG00000010112pabpc49976.471ENSEBUG00000000992pabpc49975.835Eptatretus_burgeri
ENSPLAG00000010112pabpc410080.389ENSEASG00005014119PABPC410079.042Equus_asinus_asinus
ENSPLAG00000010112pabpc410080.389ENSECAG00000009396PABPC410079.042Equus_caballus
ENSPLAG00000010112pabpc49778.988ENSEEUG00000002962PABPC410077.246Erinaceus_europaeus
ENSPLAG00000010112pabpc49892.516ENSELUG00000003195pabpc410091.862Esox_lucius
ENSPLAG00000010112pabpc410083.333ENSFCAG00000015254-10082.786Felis_catus
ENSPLAG00000010112pabpc49985.827ENSFALG00000000543PABPC410084.567Ficedula_albicollis
ENSPLAG00000010112pabpc48953.138ENSFDAG00000010581-10050.767Fukomys_damarensis
ENSPLAG00000010112pabpc410080.090ENSFDAG00000020016-10078.892Fukomys_damarensis
ENSPLAG00000010112pabpc410098.882ENSFHEG00000007548pabpc410098.882Fundulus_heteroclitus
ENSPLAG00000010112pabpc410090.424ENSGMOG00000019025pabpc49990.424Gadus_morhua
ENSPLAG00000010112pabpc49986.457ENSGALG00000003800PABPC410085.197Gallus_gallus
ENSPLAG00000010112pabpc410097.774ENSGAFG00000018195pabpc410097.774Gambusia_affinis
ENSPLAG00000010112pabpc410092.971ENSGACG00000007179pabpc49992.971Gasterosteus_aculeatus
ENSPLAG00000010112pabpc49986.457ENSGAGG00000001888PABPC410085.197Gopherus_agassizii
ENSPLAG00000010112pabpc410083.178ENSGGOG00000004002PABPC410082.473Gorilla_gorilla
ENSPLAG00000010112pabpc410095.847ENSHBUG00000020206pabpc49995.847Haplochromis_burtoni
ENSPLAG00000010112pabpc410083.075ENSHGLG00000011162PABPC410082.473Heterocephalus_glaber_female
ENSPLAG00000010112pabpc410083.075ENSHGLG00100001580PABPC410082.473Heterocephalus_glaber_male
ENSPLAG00000010112pabpc410093.930ENSHCOG00000012694pabpc49994.888Hippocampus_comes
ENSPLAG00000010112pabpc49791.452ENSIPUG00000016620pabpc410090.536Ictalurus_punctatus
ENSPLAG00000010112pabpc410084.848ENSSTOG00000010416PABPC410083.732Ictidomys_tridecemlineatus
ENSPLAG00000010112pabpc410080.982ENSJJAG00000007781Pabpc410079.632Jaculus_jaculus
ENSPLAG00000010112pabpc410095.056ENSKMAG00000013597pabpc410095.056Kryptolebias_marmoratus
ENSPLAG00000010112pabpc410094.444ENSLBEG00000013654pabpc410094.444Labrus_bergylta
ENSPLAG00000010112pabpc49987.107ENSLACG00000011907PABPC410086.457Latimeria_chalumnae
ENSPLAG00000010112pabpc49991.339ENSLOCG00000001877pabpc410091.339Lepisosteus_oculatus
ENSPLAG00000010112pabpc410085.008ENSLAFG00000000151PABPC410083.892Loxodonta_africana
ENSPLAG00000010112pabpc410083.333ENSMFAG00000041481PABPC410082.629Macaca_fascicularis
ENSPLAG00000010112pabpc410080.389ENSMMUG00000007497PABPC410079.042Macaca_mulatta
ENSPLAG00000010112pabpc410083.333ENSMNEG00000043054PABPC410082.629Macaca_nemestrina
ENSPLAG00000010112pabpc410083.333ENSMLEG00000040716PABPC410082.629Mandrillus_leucophaeus
ENSPLAG00000010112pabpc49995.955ENSMAMG00000010025pabpc49995.208Mastacembelus_armatus
ENSPLAG00000010112pabpc410095.847ENSMZEG00005006141pabpc49995.847Maylandia_zebra
ENSPLAG00000010112pabpc49882.939ENSMGAG00000005408PABPC410081.588Meleagris_gallopavo
ENSPLAG00000010112pabpc47279.524ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSPLAG00000010112pabpc45879.532ENSMAUG00000004089-9279.532Mesocricetus_auratus
ENSPLAG00000010112pabpc47790.625ENSMAUG00000019763-8488.679Mesocricetus_auratus
ENSPLAG00000010112pabpc49975.492ENSMICG00000036729-10074.240Microcebus_murinus
ENSPLAG00000010112pabpc48884.505ENSMICG00000016633-10083.604Microcebus_murinus
ENSPLAG00000010112pabpc49884.006ENSMOCG00000006763Pabpc49982.160Microtus_ochrogaster
ENSPLAG00000010112pabpc410091.534ENSMMOG00000002363pabpc49991.054Mola_mola
ENSPLAG00000010112pabpc49783.667ENSMODG00000017657-10081.846Monodelphis_domestica
ENSPLAG00000010112pabpc46071.467ENSMODG00000018051-9671.467Monodelphis_domestica
ENSPLAG00000010112pabpc49995.645ENSMALG00000011017pabpc49994.427Monopterus_albus
ENSPLAG00000010112pabpc49972.727MGP_CAROLIEiJ_G0024864-10072.743Mus_caroli
ENSPLAG00000010112pabpc410079.641MGP_CAROLIEiJ_G0026435-10095.745Mus_caroli
ENSPLAG00000010112pabpc410084.848ENSMUSG00000011257Pabpc410094.048Mus_musculus
ENSPLAG00000010112pabpc49980.121MGP_PahariEiJ_G0028765Pabpc410096.454Mus_pahari
ENSPLAG00000010112pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410096.454Mus_spretus
ENSPLAG00000010112pabpc410080.389ENSMPUG00000014414-10079.192Mustela_putorius_furo
ENSPLAG00000010112pabpc49546.293ENSMPUG00000006836-10045.545Mustela_putorius_furo
ENSPLAG00000010112pabpc410084.848ENSMLUG00000012068PABPC410083.892Myotis_lucifugus
ENSPLAG00000010112pabpc410085.008ENSNGAG00000018292Pabpc410083.892Nannospalax_galili
ENSPLAG00000010112pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSPLAG00000010112pabpc46098.077ENSNBRG00000009708pabpc49898.077Neolamprologus_brichardi
ENSPLAG00000010112pabpc410083.333ENSNLEG00000011928PABPC410082.629Nomascus_leucogenys
ENSPLAG00000010112pabpc48593.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSPLAG00000010112pabpc49974.066ENSODEG00000017434-10072.407Octodon_degus
ENSPLAG00000010112pabpc410083.178ENSODEG00000006592-10082.160Octodon_degus
ENSPLAG00000010112pabpc45382.143ENSODEG00000013457-10082.143Octodon_degus
ENSPLAG00000010112pabpc410095.847ENSONIG00000008176pabpc49995.847Oreochromis_niloticus
ENSPLAG00000010112pabpc49986.142ENSOANG00000010001PABPC410085.039Ornithorhynchus_anatinus
ENSPLAG00000010112pabpc49580.691ENSOCUG00000000562PABPC48879.278Oryctolagus_cuniculus
ENSPLAG00000010112pabpc49997.531ENSORLG00000017479pabpc49997.531Oryzias_latipes
ENSPLAG00000010112pabpc49997.531ENSORLG00020018644pabpc49997.531Oryzias_latipes_hni
ENSPLAG00000010112pabpc49997.531ENSORLG00015015042pabpc49997.531Oryzias_latipes_hsok
ENSPLAG00000010112pabpc49995.955ENSOMEG00000014410pabpc49995.208Oryzias_melastigma
ENSPLAG00000010112pabpc410081.527ENSOGAG00000004067PABPC410080.640Otolemur_garnettii
ENSPLAG00000010112pabpc410080.240ENSOARG00000020060PABPC410078.892Ovis_aries
ENSPLAG00000010112pabpc410083.178ENSPPAG00000043625PABPC410082.473Pan_paniscus
ENSPLAG00000010112pabpc410083.333ENSPPRG00000024727PABPC410082.786Panthera_pardus
ENSPLAG00000010112pabpc410083.333ENSPTIG00000005829PABPC410082.786Panthera_tigris_altaica
ENSPLAG00000010112pabpc410083.178ENSPTRG00000000573PABPC410082.473Pan_troglodytes
ENSPLAG00000010112pabpc410083.333ENSPANG00000009484PABPC410082.629Papio_anubis
ENSPLAG00000010112pabpc49990.236ENSPKIG00000025356pabpc49990.492Paramormyrops_kingsleyae
ENSPLAG00000010112pabpc49986.772ENSPSIG00000016892PABPC410085.512Pelodiscus_sinensis
ENSPLAG00000010112pabpc410090.575ENSPMGG00000009073pabpc49989.776Periophthalmus_magnuspinnatus
ENSPLAG00000010112pabpc410082.453ENSPEMG00000023569-10082.160Peromyscus_maniculatus_bairdii
ENSPLAG00000010112pabpc410079.938ENSPEMG00000024193-10079.005Peromyscus_maniculatus_bairdii
ENSPLAG00000010112pabpc48874.913ENSPMAG00000002836pabpc410075.784Petromyzon_marinus
ENSPLAG00000010112pabpc49674.370ENSPMAG00000007885pabpc410072.709Petromyzon_marinus
ENSPLAG00000010112pabpc49787.640ENSPCIG00000020674PABPC49995.146Phascolarctos_cinereus
ENSPLAG00000010112pabpc410099.840ENSPFOG00000002682pabpc410099.840Poecilia_formosa
ENSPLAG00000010112pabpc410099.521ENSPMEG00000019739pabpc410099.521Poecilia_mexicana
ENSPLAG00000010112pabpc410099.201ENSPREG00000001589pabpc410099.201Poecilia_reticulata
ENSPLAG00000010112pabpc410080.240ENSPPYG00000001506PABPC410078.892Pongo_abelii
ENSPLAG00000010112pabpc410075.599ENSPCAG00000003341PABPC410074.251Procavia_capensis
ENSPLAG00000010112pabpc49968.596ENSPCOG00000025882-9582.692Propithecus_coquereli
ENSPLAG00000010112pabpc410083.204ENSPCOG00000023725-10082.500Propithecus_coquereli
ENSPLAG00000010112pabpc49878.939ENSPVAG00000002187PABPC410077.778Pteropus_vampyrus
ENSPLAG00000010112pabpc410096.006ENSPNYG00000006134pabpc49996.006Pundamilia_nyererei
ENSPLAG00000010112pabpc49992.868ENSPNAG00000024355pabpc410092.868Pygocentrus_nattereri
ENSPLAG00000010112pabpc410081.832ENSRNOG00000015642Pabpc410080.704Rattus_norvegicus
ENSPLAG00000010112pabpc410079.695ENSRNOG00000028592AABR07035074.110078.560Rattus_norvegicus
ENSPLAG00000010112pabpc410083.333ENSRBIG00000039761PABPC410082.629Rhinopithecus_bieti
ENSPLAG00000010112pabpc410083.333ENSRROG00000033355PABPC410082.629Rhinopithecus_roxellana
ENSPLAG00000010112pabpc410083.178ENSSBOG00000026193PABPC410082.629Saimiri_boliviensis_boliviensis
ENSPLAG00000010112pabpc49787.480ENSSHAG00000018139PABPC410085.512Sarcophilus_harrisii
ENSPLAG00000010112pabpc49990.196ENSSFOG00015023514pabpc410090.196Scleropages_formosus
ENSPLAG00000010112pabpc410094.737ENSSMAG00000009007pabpc410094.737Scophthalmus_maximus
ENSPLAG00000010112pabpc49995.955ENSSDUG00000012683pabpc49995.367Seriola_dumerili
ENSPLAG00000010112pabpc49995.955ENSSLDG00000013025pabpc49995.367Seriola_lalandi_dorsalis
ENSPLAG00000010112pabpc410074.102ENSSARG00000000310PABPC410072.754Sorex_araneus
ENSPLAG00000010112pabpc49986.963ENSSPUG00000003204PABPC410085.692Sphenodon_punctatus
ENSPLAG00000010112pabpc49995.955ENSSPAG00000009252pabpc49995.527Stegastes_partitus
ENSPLAG00000010112pabpc410083.333ENSSSCG00000003660-10082.629Sus_scrofa
ENSPLAG00000010112pabpc48843.915ENSSSCG00000036170-9644.092Sus_scrofa
ENSPLAG00000010112pabpc49981.532ENSTGUG00000001266PABPC410081.203Taeniopygia_guttata
ENSPLAG00000010112pabpc410093.770ENSTRUG00000005907pabpc49993.770Takifugu_rubripes
ENSPLAG00000010112pabpc410086.741ENSTNIG00000016902pabpc49986.422Tetraodon_nigroviridis
ENSPLAG00000010112pabpc49969.486ENSTBEG00000009035PABPC410068.159Tupaia_belangeri
ENSPLAG00000010112pabpc49960.175ENSTTRG00000014340PABPC410067.164Tursiops_truncatus
ENSPLAG00000010112pabpc410083.333ENSUAMG00000000303PABPC410082.786Ursus_americanus
ENSPLAG00000010112pabpc410087.330ENSUMAG00000019585PABPC410090.115Ursus_maritimus
ENSPLAG00000010112pabpc47870.206ENSVPAG00000010041PABPC47270.206Vicugna_pacos
ENSPLAG00000010112pabpc410083.333ENSVVUG00000005215PABPC410082.786Vulpes_vulpes
ENSPLAG00000010112pabpc49982.677ENSXETG00000010946pabpc410081.417Xenopus_tropicalis
ENSPLAG00000010112pabpc46895.833ENSXETG00000027221-10095.833Xenopus_tropicalis
ENSPLAG00000010112pabpc49995.958ENSXCOG00000013190pabpc49698.585Xiphophorus_couchianus
ENSPLAG00000010112pabpc410099.361ENSXMAG00000019007pabpc410099.361Xiphophorus_maculatus

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