EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000010196 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 534 bases
Position: chrKQ549686.1:16521-17054
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024192	zf-C2H2	PF00096.26	4.7e-15	1	2
ENSPLAP00000024192	zf-C2H2	PF00096.26	4.7e-15	2	2
ENSPLAP00000024192	zf-met	PF12874.7	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003997	-	195	-	ENSPLAP00000024192	64 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000010196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000010196	-	88	62.791	ENSPLAG00000013745	-	82	62.791
ENSPLAG00000010196	-	89	58.140	ENSPLAG00000004448	-	57	58.140
ENSPLAG00000010196	-	89	65.517	ENSPLAG00000004503	-	82	65.517
ENSPLAG00000010196	-	89	70.690	ENSPLAG00000017921	-	95	70.690
ENSPLAG00000010196	-	88	65.714	ENSPLAG00000002505	-	60	65.714
ENSPLAG00000010196	-	100	67.273	ENSPLAG00000023496	-	55	67.273
ENSPLAG00000010196	-	88	64.912	ENSPLAG00000022731	-	67	64.912
ENSPLAG00000010196	-	89	73.684	ENSPLAG00000020864	-	74	73.684
ENSPLAG00000010196	-	89	68.966	ENSPLAG00000019775	-	93	68.966
ENSPLAG00000010196	-	88	70.588	ENSPLAG00000016013	-	90	68.421
ENSPLAG00000010196	-	91	68.966	ENSPLAG00000006874	-	83	68.966
ENSPLAG00000010196	-	97	66.667	ENSPLAG00000004735	-	92	63.793
ENSPLAG00000010196	-	89	70.175	ENSPLAG00000018317	-	90	70.175
ENSPLAG00000010196	-	100	65.714	ENSPLAG00000018436	-	80	68.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010196	-	94	47.541	ENSCSEG00000021317	-	53	47.541	Cynoglossus_semilaevis
ENSPLAG00000010196	-	88	70.588	ENSCVAG00000020745	-	91	64.912	Cyprinodon_variegatus
ENSPLAG00000010196	-	88	70.175	ENSCVAG00000016898	-	85	70.175	Cyprinodon_variegatus
ENSPLAG00000010196	-	91	68.421	ENSDARG00000094558	si:dkeyp-53e4.1	79	68.421	Danio_rerio
ENSPLAG00000010196	-	91	68.421	ENSDARG00000103471	si:dkey-199m13.4	79	68.421	Danio_rerio
ENSPLAG00000010196	-	91	68.421	ENSDARG00000103636	zgc:173702	79	68.421	Danio_rerio
ENSPLAG00000010196	-	94	59.649	ENSDARG00000105692	CABZ01069022.1	60	59.649	Danio_rerio
ENSPLAG00000010196	-	91	68.421	ENSDARG00000102673	si:dkey-26i24.1	80	68.421	Danio_rerio
ENSPLAG00000010196	-	91	68.421	ENSDARG00000105306	si:dkeyp-44b5.5	79	68.421	Danio_rerio
ENSPLAG00000010196	-	91	68.421	ENSDARG00000096041	si:ch211-162i8.2	79	68.421	Danio_rerio
ENSPLAG00000010196	-	91	68.421	ENSDARG00000100842	si:ch211-223a21.4	79	68.421	Danio_rerio
ENSPLAG00000010196	-	100	57.143	ENSFHEG00000019728	-	96	61.111	Fundulus_heteroclitus
ENSPLAG00000010196	-	100	81.538	ENSFHEG00000018619	-	54	81.538	Fundulus_heteroclitus
ENSPLAG00000010196	-	88	61.667	ENSFHEG00000022186	-	71	46.154	Fundulus_heteroclitus
ENSPLAG00000010196	-	88	64.912	ENSFHEG00000004728	-	72	64.912	Fundulus_heteroclitus
ENSPLAG00000010196	-	91	68.966	ENSGAFG00000020505	-	60	68.966	Gambusia_affinis
ENSPLAG00000010196	-	100	86.154	ENSGAFG00000020501	-	50	86.154	Gambusia_affinis
ENSPLAG00000010196	-	88	60.000	ENSGAFG00000013116	-	54	60.000	Gambusia_affinis
ENSPLAG00000010196	-	100	55.357	ENSKMAG00000002583	-	65	57.143	Kryptolebias_marmoratus
ENSPLAG00000010196	-	97	54.386	ENSLBEG00000001756	-	81	49.231	Labrus_bergylta
ENSPLAG00000010196	-	92	64.912	ENSLOCG00000000714	-	85	64.912	Lepisosteus_oculatus
ENSPLAG00000010196	-	89	50.000	ENSMZEG00005010493	-	73	50.000	Maylandia_zebra
ENSPLAG00000010196	-	100	62.857	ENSMALG00000014911	-	67	62.857	Monopterus_albus
ENSPLAG00000010196	-	88	64.912	ENSORLG00000025380	-	64	64.912	Oryzias_latipes
ENSPLAG00000010196	-	89	64.912	ENSORLG00020016754	-	85	64.912	Oryzias_latipes_hni
ENSPLAG00000010196	-	89	64.912	ENSORLG00015014006	-	80	64.912	Oryzias_latipes_hsok
ENSPLAG00000010196	-	100	67.742	ENSOMEG00000009071	-	80	58.621	Oryzias_melastigma
ENSPLAG00000010196	-	94	64.912	ENSOMEG00000023820	-	85	67.500	Oryzias_melastigma
ENSPLAG00000010196	-	88	74.194	ENSPFOG00000007847	-	53	68.421	Poecilia_formosa
ENSPLAG00000010196	-	91	66.071	ENSPFOG00000024622	-	93	66.071	Poecilia_formosa
ENSPLAG00000010196	-	88	62.500	ENSPMEG00000023866	-	81	62.500	Poecilia_mexicana
ENSPLAG00000010196	-	89	67.241	ENSPMEG00000017986	-	95	67.241	Poecilia_mexicana
ENSPLAG00000010196	-	100	100.000	ENSPMEG00000007876	-	100	100.000	Poecilia_mexicana
ENSPLAG00000010196	-	89	65.517	ENSPMEG00000005500	-	79	65.517	Poecilia_mexicana
ENSPLAG00000010196	-	89	70.175	ENSPMEG00000000690	-	50	70.175	Poecilia_mexicana
ENSPLAG00000010196	-	100	61.404	ENSPREG00000000364	-	66	61.404	Poecilia_reticulata
ENSPLAG00000010196	-	88	64.912	ENSPREG00000001952	-	85	61.404	Poecilia_reticulata
ENSPLAG00000010196	-	88	63.158	ENSPNYG00000019820	-	63	71.429	Pundamilia_nyererei
ENSPLAG00000010196	-	86	53.571	ENSSLDG00000000432	-	79	53.571	Seriola_lalandi_dorsalis
ENSPLAG00000010196	-	88	61.404	ENSSPAG00000005716	-	66	61.404	Stegastes_partitus
ENSPLAG00000010196	-	84	54.545	ENSXCOG00000007420	-	92	54.545	Xiphophorus_couchianus
ENSPLAG00000010196	-	89	68.421	ENSXCOG00000002512	-	71	68.421	Xiphophorus_couchianus
ENSPLAG00000010196	-	88	62.500	ENSXCOG00000008062	-	91	59.649	Xiphophorus_couchianus
ENSPLAG00000010196	-	88	70.000	ENSXMAG00000023721	-	69	70.000	Xiphophorus_maculatus