EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000010236 (Gene tree)
Gene ID: 106943635
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 4525 bases
Position: chrKQ550319.1:11989-16513
Accession: 106943635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024218	RRM_1	PF00076.22	1.4e-23	1	2
ENSPLAP00000024218	RRM_1	PF00076.22	1.4e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003926	-	1632	XM_015026949	ENSPLAP00000024218	296 (aa)	XP_014882435	UPI00072EEF67

Gene Model

Click here to download ENSPLAG00000010236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000010236	trnau1apa	54	30.723	ENSPLAG00000009390	tia1l	57	30.723
ENSPLAG00000010236	trnau1apa	93	41.956	ENSPLAG00000015480	trnau1apb	92	40.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010236	trnau1apa	93	57.401	ENSG00000180098	TRNAU1AP	91	56.679	Homo_sapiens
ENSPLAG00000010236	trnau1apa	99	82.373	ENSAPOG00000007148	TRNAU1AP	99	81.633	Acanthochromis_polyacanthus
ENSPLAG00000010236	trnau1apa	93	57.762	ENSAMEG00000011367	TRNAU1AP	91	57.040	Ailuropoda_melanoleuca
ENSPLAG00000010236	trnau1apa	91	92.208	ENSACIG00000004161	trnau1apa	93	86.585	Amphilophus_citrinellus
ENSPLAG00000010236	trnau1apa	99	84.014	ENSAOCG00000008056	trnau1apa	95	81.973	Amphiprion_ocellaris
ENSPLAG00000010236	trnau1apa	99	84.014	ENSAPEG00000008868	trnau1apa	95	81.973	Amphiprion_percula
ENSPLAG00000010236	trnau1apa	99	79.801	ENSATEG00000012140	trnau1apa	96	79.470	Anabas_testudineus
ENSPLAG00000010236	trnau1apa	93	55.000	ENSAPLG00000002606	TRNAU1AP	96	56.429	Anas_platyrhynchos
ENSPLAG00000010236	trnau1apa	78	37.179	ENSACAG00000004205	-	86	37.247	Anolis_carolinensis
ENSPLAG00000010236	trnau1apa	93	47.482	ENSACAG00000003995	-	92	46.786	Anolis_carolinensis
ENSPLAG00000010236	trnau1apa	93	57.401	ENSANAG00000018976	TRNAU1AP	91	56.679	Aotus_nancymaae
ENSPLAG00000010236	trnau1apa	99	82.993	ENSACLG00000018515	trnau1apa	95	81.633	Astatotilapia_calliptera
ENSPLAG00000010236	trnau1apa	94	67.500	ENSAMXG00000029240	-	100	67.500	Astyanax_mexicanus
ENSPLAG00000010236	trnau1apa	99	51.505	ENSAMXG00000013750	trnau1apa	93	52.000	Astyanax_mexicanus
ENSPLAG00000010236	trnau1apa	93	57.040	ENSBTAG00000010393	TRNAU1AP	91	56.318	Bos_taurus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCJAG00000009717	TRNAU1AP	91	56.679	Callithrix_jacchus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCAFG00000011735	TRNAU1AP	91	56.679	Canis_familiaris
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCAFG00020023584	TRNAU1AP	91	56.679	Canis_lupus_dingo
ENSPLAG00000010236	trnau1apa	93	57.040	ENSCHIG00000023215	TRNAU1AP	91	56.318	Capra_hircus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSTSYG00000003506	TRNAU1AP	91	56.679	Carlito_syrichta
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCPOG00000001925	TRNAU1AP	91	56.679	Cavia_porcellus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCCAG00000037506	TRNAU1AP	91	56.679	Cebus_capucinus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCATG00000044617	TRNAU1AP	91	56.679	Cercocebus_atys
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCLAG00000008223	TRNAU1AP	91	56.679	Chinchilla_lanigera
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCSAG00000001014	TRNAU1AP	91	56.679	Chlorocebus_sabaeus
ENSPLAG00000010236	trnau1apa	93	55.957	ENSCPBG00000000121	TRNAU1AP	96	56.429	Chrysemys_picta_bellii
ENSPLAG00000010236	trnau1apa	74	32.780	ENSCSAVG00000011781	-	84	50.000	Ciona_savignyi
ENSPLAG00000010236	trnau1apa	93	49.458	ENSCANG00000041949	TRNAU1AP	93	51.667	Colobus_angolensis_palliatus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCGRG00001004713	Trnau1ap	91	56.679	Cricetulus_griseus_chok1gshd
ENSPLAG00000010236	trnau1apa	93	57.401	ENSCGRG00000014532	Trnau1ap	91	56.679	Cricetulus_griseus_crigri
ENSPLAG00000010236	trnau1apa	99	69.435	ENSCSEG00000006663	trnau1apa	85	87.805	Cynoglossus_semilaevis
ENSPLAG00000010236	trnau1apa	99	87.797	ENSCVAG00000018069	trnau1apa	95	87.797	Cyprinodon_variegatus
ENSPLAG00000010236	trnau1apa	99	47.987	ENSDARG00000101323	trnau1apa	91	46.154	Danio_rerio
ENSPLAG00000010236	trnau1apa	93	57.401	ENSDNOG00000033009	TRNAU1AP	91	56.679	Dasypus_novemcinctus
ENSPLAG00000010236	trnau1apa	57	57.895	ENSDNOG00000047959	-	86	58.434	Dasypus_novemcinctus
ENSPLAG00000010236	trnau1apa	93	54.874	ENSDORG00000006349	Trnau1ap	93	58.150	Dipodomys_ordii
ENSPLAG00000010236	trnau1apa	94	35.127	FBgn0031607	CG15440	94	33.016	Drosophila_melanogaster
ENSPLAG00000010236	trnau1apa	82	53.878	ENSETEG00000012594	TRNAU1AP	94	53.061	Echinops_telfairi
ENSPLAG00000010236	trnau1apa	59	47.368	ENSEBUG00000006349	-	56	47.368	Eptatretus_burgeri
ENSPLAG00000010236	trnau1apa	93	57.401	ENSEASG00005010062	TRNAU1AP	91	56.679	Equus_asinus_asinus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSECAG00000012980	TRNAU1AP	91	56.679	Equus_caballus
ENSPLAG00000010236	trnau1apa	99	66.667	ENSELUG00000017686	trnau1apa	99	67.340	Esox_lucius
ENSPLAG00000010236	trnau1apa	92	80.263	ENSELUG00000022790	-	96	80.263	Esox_lucius
ENSPLAG00000010236	trnau1apa	93	57.401	ENSFCAG00000013401	TRNAU1AP	91	56.679	Felis_catus
ENSPLAG00000010236	trnau1apa	93	55.596	ENSFALG00000001371	TRNAU1AP	96	56.071	Ficedula_albicollis
ENSPLAG00000010236	trnau1apa	93	57.401	ENSFDAG00000018599	TRNAU1AP	91	56.679	Fukomys_damarensis
ENSPLAG00000010236	trnau1apa	77	91.416	ENSFHEG00000018232	trnau1apa	89	87.160	Fundulus_heteroclitus
ENSPLAG00000010236	trnau1apa	99	62.542	ENSGMOG00000016508	trnau1apa	95	61.873	Gadus_morhua
ENSPLAG00000010236	trnau1apa	93	55.235	ENSGALG00000001310	-	91	56.071	Gallus_gallus
ENSPLAG00000010236	trnau1apa	72	37.273	ENSGALG00000012721	C2H6orf52	79	37.555	Gallus_gallus
ENSPLAG00000010236	trnau1apa	85	97.211	ENSGAFG00000004928	trnau1apa	95	97.211	Gambusia_affinis
ENSPLAG00000010236	trnau1apa	99	80.952	ENSGACG00000001443	trnau1apa	95	80.952	Gasterosteus_aculeatus
ENSPLAG00000010236	trnau1apa	93	55.596	ENSGAGG00000004940	TRNAU1AP	96	56.429	Gopherus_agassizii
ENSPLAG00000010236	trnau1apa	93	57.401	ENSGGOG00000003511	TRNAU1AP	91	56.679	Gorilla_gorilla
ENSPLAG00000010236	trnau1apa	99	93.496	ENSHBUG00000002510	trnau1apa	88	93.496	Haplochromis_burtoni
ENSPLAG00000010236	trnau1apa	93	57.401	ENSHGLG00000010380	TRNAU1AP	91	56.679	Heterocephalus_glaber_female
ENSPLAG00000010236	trnau1apa	92	57.143	ENSHGLG00100012699	TRNAU1AP	91	56.410	Heterocephalus_glaber_male
ENSPLAG00000010236	trnau1apa	99	74.419	ENSHCOG00000014770	trnau1apa	96	72.093	Hippocampus_comes
ENSPLAG00000010236	trnau1apa	93	57.401	ENSSTOG00000000079	TRNAU1AP	91	56.679	Ictidomys_tridecemlineatus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSJJAG00000010128	Trnau1ap	91	56.679	Jaculus_jaculus
ENSPLAG00000010236	trnau1apa	99	86.735	ENSKMAG00000001230	trnau1apa	95	86.735	Kryptolebias_marmoratus
ENSPLAG00000010236	trnau1apa	99	76.066	ENSLBEG00000011683	trnau1apa	96	75.828	Labrus_bergylta
ENSPLAG00000010236	trnau1apa	93	50.181	ENSLACG00000005541	TRNAU1AP	91	51.071	Latimeria_chalumnae
ENSPLAG00000010236	trnau1apa	93	58.273	ENSLOCG00000004041	trnau1apa	92	58.273	Lepisosteus_oculatus
ENSPLAG00000010236	trnau1apa	93	57.762	ENSLAFG00000007628	TRNAU1AP	91	57.040	Loxodonta_africana
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMFAG00000043751	TRNAU1AP	91	56.679	Macaca_fascicularis
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMMUG00000006561	TRNAU1AP	91	56.679	Macaca_mulatta
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMNEG00000044201	TRNAU1AP	91	56.679	Macaca_nemestrina
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMLEG00000015649	TRNAU1AP	91	56.679	Mandrillus_leucophaeus
ENSPLAG00000010236	trnau1apa	99	80.936	ENSMAMG00000001247	trnau1apa	96	78.595	Mastacembelus_armatus
ENSPLAG00000010236	trnau1apa	99	82.993	ENSMZEG00005017722	trnau1apa	95	81.633	Maylandia_zebra
ENSPLAG00000010236	trnau1apa	93	56.318	ENSMGAG00000002105	TRNAU1AP	94	55.596	Meleagris_gallopavo
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMICG00000008386	TRNAU1AP	91	56.679	Microcebus_murinus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMOCG00000011189	Trnau1ap	91	56.679	Microtus_ochrogaster
ENSPLAG00000010236	trnau1apa	99	66.107	ENSMMOG00000012107	trnau1apa	95	66.107	Mola_mola
ENSPLAG00000010236	trnau1apa	93	56.318	ENSMODG00000010927	TRNAU1AP	91	55.714	Monodelphis_domestica
ENSPLAG00000010236	trnau1apa	99	81.818	ENSMALG00000016778	trnau1apa	95	81.818	Monopterus_albus
ENSPLAG00000010236	trnau1apa	93	57.401	MGP_CAROLIEiJ_G0026563	Trnau1ap	96	52.830	Mus_caroli
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMUSG00000028898	Trnau1ap	96	52.830	Mus_musculus
ENSPLAG00000010236	trnau1apa	93	57.401	MGP_PahariEiJ_G0028896	Trnau1ap	84	72.881	Mus_pahari
ENSPLAG00000010236	trnau1apa	93	57.401	MGP_SPRETEiJ_G0027544	Trnau1ap	96	52.830	Mus_spretus
ENSPLAG00000010236	trnau1apa	93	57.762	ENSMPUG00000015511	TRNAU1AP	91	57.040	Mustela_putorius_furo
ENSPLAG00000010236	trnau1apa	93	57.401	ENSMLUG00000012586	TRNAU1AP	91	56.679	Myotis_lucifugus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSNGAG00000015881	Trnau1ap	80	68.548	Nannospalax_galili
ENSPLAG00000010236	trnau1apa	99	71.380	ENSNBRG00000001758	trnau1apa	95	70.034	Neolamprologus_brichardi
ENSPLAG00000010236	trnau1apa	93	57.401	ENSNLEG00000009822	TRNAU1AP	91	56.679	Nomascus_leucogenys
ENSPLAG00000010236	trnau1apa	93	56.679	ENSMEUG00000006117	TRNAU1AP	94	55.235	Notamacropus_eugenii
ENSPLAG00000010236	trnau1apa	50	60.526	ENSOPRG00000007084	-	51	60.526	Ochotona_princeps
ENSPLAG00000010236	trnau1apa	93	57.401	ENSODEG00000002970	TRNAU1AP	91	56.679	Octodon_degus
ENSPLAG00000010236	trnau1apa	82	87.654	ENSONIG00000004715	trnau1apa	95	86.008	Oreochromis_niloticus
ENSPLAG00000010236	trnau1apa	98	41.438	ENSOANG00000005325	-	91	42.857	Ornithorhynchus_anatinus
ENSPLAG00000010236	trnau1apa	85	45.238	ENSOCUG00000006834	-	92	44.841	Oryctolagus_cuniculus
ENSPLAG00000010236	trnau1apa	93	55.957	ENSOCUG00000011704	-	91	55.235	Oryctolagus_cuniculus
ENSPLAG00000010236	trnau1apa	93	46.931	ENSOCUG00000002353	-	91	46.570	Oryctolagus_cuniculus
ENSPLAG00000010236	trnau1apa	99	82.313	ENSORLG00000010428	trnau1apa	95	82.313	Oryzias_latipes
ENSPLAG00000010236	trnau1apa	99	82.313	ENSORLG00020000926	trnau1ap	95	82.313	Oryzias_latipes_hni
ENSPLAG00000010236	trnau1apa	99	82.313	ENSORLG00015009858	trnau1ap	95	82.313	Oryzias_latipes_hsok
ENSPLAG00000010236	trnau1apa	99	82.653	ENSOMEG00000007873	trnau1apa	95	82.653	Oryzias_melastigma
ENSPLAG00000010236	trnau1apa	93	57.401	ENSOGAG00000002274	TRNAU1AP	91	56.679	Otolemur_garnettii
ENSPLAG00000010236	trnau1apa	93	57.040	ENSOARG00000002843	TRNAU1AP	91	56.318	Ovis_aries
ENSPLAG00000010236	trnau1apa	93	57.401	ENSPPAG00000033927	TRNAU1AP	91	56.679	Pan_paniscus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSPPRG00000004416	TRNAU1AP	91	56.679	Panthera_pardus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSPTIG00000016677	TRNAU1AP	91	56.679	Panthera_tigris_altaica
ENSPLAG00000010236	trnau1apa	89	50.936	ENSPTRG00000000434	-	90	51.311	Pan_troglodytes
ENSPLAG00000010236	trnau1apa	93	57.401	ENSPANG00000016019	TRNAU1AP	91	56.679	Papio_anubis
ENSPLAG00000010236	trnau1apa	93	56.835	ENSPKIG00000015511	trnau1apa	89	54.710	Paramormyrops_kingsleyae
ENSPLAG00000010236	trnau1apa	91	77.632	ENSPKIG00000022205	-	94	77.632	Paramormyrops_kingsleyae
ENSPLAG00000010236	trnau1apa	93	56.679	ENSPSIG00000006864	TRNAU1AP	96	56.429	Pelodiscus_sinensis
ENSPLAG00000010236	trnau1apa	99	68.350	ENSPMGG00000023893	trnau1apa	95	66.441	Periophthalmus_magnuspinnatus
ENSPLAG00000010236	trnau1apa	93	57.040	ENSPEMG00000007877	Trnau1ap	91	56.318	Peromyscus_maniculatus_bairdii
ENSPLAG00000010236	trnau1apa	76	51.556	ENSPMAG00000005934	trnau1apa	95	49.778	Petromyzon_marinus
ENSPLAG00000010236	trnau1apa	54	55.828	ENSPMAG00000000592	trnau1apa	90	55.828	Petromyzon_marinus
ENSPLAG00000010236	trnau1apa	100	100.000	ENSPFOG00000008100	trnau1apa	96	100.000	Poecilia_formosa
ENSPLAG00000010236	trnau1apa	100	100.000	ENSPMEG00000016387	trnau1apa	94	100.000	Poecilia_mexicana
ENSPLAG00000010236	trnau1apa	89	100.000	ENSPREG00000019821	trnau1apa	92	100.000	Poecilia_reticulata
ENSPLAG00000010236	trnau1apa	87	46.743	ENSPPYG00000001639	-	95	48.276	Pongo_abelii
ENSPLAG00000010236	trnau1apa	93	57.401	ENSPCOG00000027712	-	91	56.679	Propithecus_coquereli
ENSPLAG00000010236	trnau1apa	93	44.565	ENSPCOG00000023470	-	92	43.478	Propithecus_coquereli
ENSPLAG00000010236	trnau1apa	93	57.401	ENSPVAG00000017214	TRNAU1AP	91	56.679	Pteropus_vampyrus
ENSPLAG00000010236	trnau1apa	99	81.605	ENSPNYG00000010130	trnau1apa	95	83.871	Pundamilia_nyererei
ENSPLAG00000010236	trnau1apa	99	50.508	ENSPNAG00000024905	trnau1apa	93	50.508	Pygocentrus_nattereri
ENSPLAG00000010236	trnau1apa	92	53.480	ENSRNOG00000055344	Trnau1ap	88	53.114	Rattus_norvegicus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSRBIG00000029083	TRNAU1AP	91	56.679	Rhinopithecus_bieti
ENSPLAG00000010236	trnau1apa	93	57.401	ENSRROG00000029128	TRNAU1AP	91	56.679	Rhinopithecus_roxellana
ENSPLAG00000010236	trnau1apa	93	57.401	ENSSBOG00000021299	TRNAU1AP	91	56.679	Saimiri_boliviensis_boliviensis
ENSPLAG00000010236	trnau1apa	93	56.679	ENSSHAG00000008108	TRNAU1AP	91	56.071	Sarcophilus_harrisii
ENSPLAG00000010236	trnau1apa	99	76.768	ENSSMAG00000020851	trnau1apa	95	78.114	Scophthalmus_maximus
ENSPLAG00000010236	trnau1apa	99	80.201	ENSSDUG00000011734	trnau1apa	96	79.530	Seriola_dumerili
ENSPLAG00000010236	trnau1apa	99	64.286	ENSSLDG00000012101	trnau1apa	94	60.204	Seriola_lalandi_dorsalis
ENSPLAG00000010236	trnau1apa	93	57.401	ENSSARG00000007536	TRNAU1AP	94	56.679	Sorex_araneus
ENSPLAG00000010236	trnau1apa	66	49.231	ENSSPUG00000010415	-	94	49.444	Sphenodon_punctatus
ENSPLAG00000010236	trnau1apa	98	52.740	ENSSPUG00000010400	-	92	54.152	Sphenodon_punctatus
ENSPLAG00000010236	trnau1apa	99	82.993	ENSSPAG00000005029	trnau1apa	95	82.313	Stegastes_partitus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSSSCG00000030284	TRNAU1AP	91	56.679	Sus_scrofa
ENSPLAG00000010236	trnau1apa	93	56.679	ENSTGUG00000000735	-	94	56.429	Taeniopygia_guttata
ENSPLAG00000010236	trnau1apa	72	38.249	ENSTGUG00000005908	-	99	39.437	Taeniopygia_guttata
ENSPLAG00000010236	trnau1apa	99	77.966	ENSTRUG00000003352	trnau1apa	95	74.915	Takifugu_rubripes
ENSPLAG00000010236	trnau1apa	99	75.421	ENSTNIG00000006129	trnau1apa	95	74.747	Tetraodon_nigroviridis
ENSPLAG00000010236	trnau1apa	82	51.020	ENSTBEG00000008049	-	94	50.204	Tupaia_belangeri
ENSPLAG00000010236	trnau1apa	93	57.401	ENSTTRG00000001854	TRNAU1AP	91	56.679	Tursiops_truncatus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSUAMG00000008789	TRNAU1AP	96	56.679	Ursus_americanus
ENSPLAG00000010236	trnau1apa	93	57.401	ENSUMAG00000011068	TRNAU1AP	91	56.679	Ursus_maritimus
ENSPLAG00000010236	trnau1apa	82	56.735	ENSVPAG00000006778	TRNAU1AP	79	55.918	Vicugna_pacos
ENSPLAG00000010236	trnau1apa	93	57.401	ENSVVUG00000012518	TRNAU1AP	85	56.679	Vulpes_vulpes
ENSPLAG00000010236	trnau1apa	100	98.986	ENSXMAG00000017361	trnau1apa	96	98.986	Xiphophorus_maculatus