EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000010405 (Gene tree)
Gene ID: 106961827
Gene Symbol: si:dkey-37o8.1
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3770 bases
Position: chrKQ546654.1:149548-153317
Accession: 106961827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024313	GTP_EFTU	PF00009.27	2.8e-50	1	1
ENSPLAP00000024313	MMR_HSR1	PF01926.23	7.5e-06	1	1
ENSPLAP00000024313	GTP_EFTU_D2	PF03144.25	6.2e-13	1	1
ENSPLAP00000024313	GTP_EFTU_D3	PF03143.17	4.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003700	-	2165	XM_015055876	ENSPLAP00000024313	456 (aa)	XP_014911362	UPI00072DB343

Gene Model

Click here to download ENSPLAG00000010405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000010405	si:dkey-37o8.1	96	37.642	ENSPLAG00000006193	hbs1l	59	37.383
ENSPLAG00000010405	si:dkey-37o8.1	100	67.100	ENSPLAG00000005287	eef1a1b	100	67.100
ENSPLAG00000010405	si:dkey-37o8.1	100	67.316	ENSPLAG00000022915	eef1a1b	100	67.316
ENSPLAG00000010405	si:dkey-37o8.1	66	40.461	ENSPLAG00000007443	GSPT1	56	39.519
ENSPLAG00000010405	si:dkey-37o8.1	99	68.202	ENSPLAG00000004325	-	99	68.202
ENSPLAG00000010405	si:dkey-37o8.1	79	40.110	ENSPLAG00000001492	-	63	38.983
ENSPLAG00000010405	si:dkey-37o8.1	98	67.562	ENSPLAG00000004316	-	100	66.594

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010405	si:dkey-37o8.1	98	89.732	ENSAPOG00000016459	si:dkey-37o8.1	98	89.732	Acanthochromis_polyacanthus
ENSPLAG00000010405	si:dkey-37o8.1	98	85.430	ENSACIG00000020985	si:dkey-37o8.1	85	85.430	Amphilophus_citrinellus
ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	ENSAOCG00000002663	si:dkey-37o8.1	100	89.278	Amphiprion_ocellaris
ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	ENSAPEG00000012670	si:dkey-37o8.1	100	89.278	Amphiprion_percula
ENSPLAG00000010405	si:dkey-37o8.1	92	90.047	ENSATEG00000002217	si:dkey-37o8.1	99	90.047	Anabas_testudineus
ENSPLAG00000010405	si:dkey-37o8.1	100	87.527	ENSACLG00000003519	si:dkey-37o8.1	100	87.527	Astatotilapia_calliptera
ENSPLAG00000010405	si:dkey-37o8.1	100	83.188	ENSAMXG00000002728	si:dkey-37o8.1	97	84.163	Astyanax_mexicanus
ENSPLAG00000010405	si:dkey-37o8.1	99	70.897	ENSCPBG00000020570	-	88	71.171	Chrysemys_picta_bellii
ENSPLAG00000010405	si:dkey-37o8.1	100	82.789	ENSCSEG00000019807	si:dkey-37o8.1	100	82.112	Cynoglossus_semilaevis
ENSPLAG00000010405	si:dkey-37o8.1	99	92.070	ENSCVAG00000009828	si:dkey-37o8.1	99	92.070	Cyprinodon_variegatus
ENSPLAG00000010405	si:dkey-37o8.1	100	80.349	ENSDARG00000071727	si:dkey-37o8.1	95	80.349	Danio_rerio
ENSPLAG00000010405	si:dkey-37o8.1	100	83.406	ENSELUG00000007495	si:dkey-37o8.1	100	83.406	Esox_lucius
ENSPLAG00000010405	si:dkey-37o8.1	100	91.904	ENSFHEG00000017452	si:dkey-37o8.1	100	91.904	Fundulus_heteroclitus
ENSPLAG00000010405	si:dkey-37o8.1	99	78.414	ENSGMOG00000006122	si:dkey-37o8.1	100	78.414	Gadus_morhua
ENSPLAG00000010405	si:dkey-37o8.1	98	88.393	ENSGAFG00000000367	si:dkey-37o8.1	99	88.393	Gambusia_affinis
ENSPLAG00000010405	si:dkey-37o8.1	100	85.558	ENSGACG00000004505	si:dkey-37o8.1	100	85.558	Gasterosteus_aculeatus
ENSPLAG00000010405	si:dkey-37o8.1	96	73.243	ENSGAGG00000007724	-	89	76.087	Gopherus_agassizii
ENSPLAG00000010405	si:dkey-37o8.1	100	87.309	ENSHBUG00000015515	si:dkey-37o8.1	100	87.309	Haplochromis_burtoni
ENSPLAG00000010405	si:dkey-37o8.1	99	78.714	ENSHCOG00000001215	si:dkey-37o8.1	100	78.714	Hippocampus_comes
ENSPLAG00000010405	si:dkey-37o8.1	100	81.659	ENSIPUG00000004067	si:dkey-37o8.1	100	81.659	Ictalurus_punctatus
ENSPLAG00000010405	si:dkey-37o8.1	100	90.591	ENSKMAG00000015910	si:dkey-37o8.1	100	90.591	Kryptolebias_marmoratus
ENSPLAG00000010405	si:dkey-37o8.1	99	88.470	ENSLBEG00000021334	si:dkey-37o8.1	90	88.470	Labrus_bergylta
ENSPLAG00000010405	si:dkey-37o8.1	99	74.890	ENSLACG00000003948	si:dkey-37o8.1	99	74.890	Latimeria_chalumnae
ENSPLAG00000010405	si:dkey-37o8.1	99	79.386	ENSLOCG00000011245	si:dkey-37o8.1	99	79.386	Lepisosteus_oculatus
ENSPLAG00000010405	si:dkey-37o8.1	99	73.568	ENSMAMG00000009907	si:dkey-37o8.1	91	74.541	Mastacembelus_armatus
ENSPLAG00000010405	si:dkey-37o8.1	100	87.527	ENSMZEG00005018358	si:dkey-37o8.1	100	87.527	Maylandia_zebra
ENSPLAG00000010405	si:dkey-37o8.1	98	87.723	ENSMMOG00000004111	si:dkey-37o8.1	98	87.723	Mola_mola
ENSPLAG00000010405	si:dkey-37o8.1	96	79.909	ENSMALG00000017152	si:dkey-37o8.1	97	80.282	Monopterus_albus
ENSPLAG00000010405	si:dkey-37o8.1	100	87.309	ENSNBRG00000013552	si:dkey-37o8.1	100	87.309	Neolamprologus_brichardi
ENSPLAG00000010405	si:dkey-37o8.1	100	87.309	ENSONIG00000006165	si:dkey-37o8.1	100	87.309	Oreochromis_niloticus
ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	ENSORLG00000019066	si:dkey-37o8.1	100	89.278	Oryzias_latipes
ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	ENSORLG00020008094	si:dkey-37o8.1	100	89.278	Oryzias_latipes_hni
ENSPLAG00000010405	si:dkey-37o8.1	100	89.059	ENSORLG00015008410	si:dkey-37o8.1	100	89.059	Oryzias_latipes_hsok
ENSPLAG00000010405	si:dkey-37o8.1	100	89.497	ENSOMEG00000001868	si:dkey-37o8.1	100	89.497	Oryzias_melastigma
ENSPLAG00000010405	si:dkey-37o8.1	100	82.135	ENSPKIG00000017246	si:dkey-37o8.1	100	82.135	Paramormyrops_kingsleyae
ENSPLAG00000010405	si:dkey-37o8.1	59	67.143	ENSPSIG00000008080	-	99	67.143	Pelodiscus_sinensis
ENSPLAG00000010405	si:dkey-37o8.1	100	98.246	ENSPFOG00000013173	si:dkey-37o8.1	100	98.246	Poecilia_formosa
ENSPLAG00000010405	si:dkey-37o8.1	100	97.812	ENSPMEG00000015233	si:dkey-37o8.1	100	97.812	Poecilia_mexicana
ENSPLAG00000010405	si:dkey-37o8.1	99	96.256	ENSPREG00000006280	si:dkey-37o8.1	100	96.256	Poecilia_reticulata
ENSPLAG00000010405	si:dkey-37o8.1	100	86.871	ENSPNYG00000002059	si:dkey-37o8.1	100	86.871	Pundamilia_nyererei
ENSPLAG00000010405	si:dkey-37o8.1	100	82.533	ENSPNAG00000009990	si:dkey-37o8.1	100	82.533	Pygocentrus_nattereri
ENSPLAG00000010405	si:dkey-37o8.1	99	80.795	ENSSFOG00015019070	si:dkey-37o8.1	96	81.693	Scleropages_formosus
ENSPLAG00000010405	si:dkey-37o8.1	99	89.135	ENSSMAG00000016143	si:dkey-37o8.1	99	89.135	Scophthalmus_maximus
ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	ENSSDUG00000009163	si:dkey-37o8.1	100	89.278	Seriola_dumerili
ENSPLAG00000010405	si:dkey-37o8.1	100	89.059	ENSSLDG00000023761	si:dkey-37o8.1	100	89.059	Seriola_lalandi_dorsalis
ENSPLAG00000010405	si:dkey-37o8.1	98	70.246	ENSSPUG00000007467	-	95	70.091	Sphenodon_punctatus
ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	ENSSPAG00000013856	si:dkey-37o8.1	100	89.278	Stegastes_partitus
ENSPLAG00000010405	si:dkey-37o8.1	97	88.989	ENSTRUG00000009006	si:dkey-37o8.1	96	89.120	Takifugu_rubripes
ENSPLAG00000010405	si:dkey-37o8.1	98	87.946	ENSTNIG00000017138	si:dkey-37o8.1	97	87.946	Tetraodon_nigroviridis
ENSPLAG00000010405	si:dkey-37o8.1	96	74.715	ENSXETG00000017744	42Sp50	95	73.516	Xenopus_tropicalis
ENSPLAG00000010405	si:dkey-37o8.1	99	95.374	ENSXCOG00000012296	si:dkey-37o8.1	100	95.374	Xiphophorus_couchianus
ENSPLAG00000010405	si:dkey-37o8.1	100	95.405	ENSXMAG00000001998	si:dkey-37o8.1	100	95.405	Xiphophorus_maculatus