EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000010430 (Gene tree)
Gene ID: 106945822
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 20285 bases
Position: chrKQ545326.1:93816-114100
Accession: 106945822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007969	ResIII	PF04851.15	3.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003668	-	3099	XM_015029786	ENSPLAP00000007969	937 (aa)	XP_014885272	UPI00072EE472

Gene Model

Click here to download ENSPLAG00000010430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000010430	rad54b	53	32.617	ENSPLAG00000015145	chd1l	51	32.617
ENSPLAG00000010430	rad54b	53	34.043	ENSPLAG00000006504	hells	55	34.043
ENSPLAG00000010430	rad54b	61	44.652	ENSPLAG00000023416	rad54l	94	44.143
ENSPLAG00000010430	rad54b	56	31.449	ENSPLAG00000005575	ercc6l	51	31.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010430	rad54b	99	54.894	ENSG00000197275	RAD54B	99	54.894	Homo_sapiens
ENSPLAG00000010430	rad54b	77	59.946	ENSG00000265817	FSBP	99	59.946	Homo_sapiens
ENSPLAG00000010430	rad54b	99	55.319	ENSAMEG00000005834	-	99	55.319	Ailuropoda_melanoleuca
ENSPLAG00000010430	rad54b	99	78.219	ENSACIG00000013005	rad54b	99	78.219	Amphilophus_citrinellus
ENSPLAG00000010430	rad54b	99	81.944	ENSAOCG00000008523	rad54b	99	81.944	Amphiprion_ocellaris
ENSPLAG00000010430	rad54b	99	74.121	ENSAPEG00000001673	rad54b	99	74.547	Amphiprion_percula
ENSPLAG00000010430	rad54b	98	83.456	ENSATEG00000001527	rad54b	99	83.456	Anabas_testudineus
ENSPLAG00000010430	rad54b	100	57.700	ENSAPLG00000014366	-	100	57.817	Anas_platyrhynchos
ENSPLAG00000010430	rad54b	84	61.217	ENSACAG00000003671	-	98	61.217	Anolis_carolinensis
ENSPLAG00000010430	rad54b	68	61.646	ENSANAG00000019528	-	99	61.646	Aotus_nancymaae
ENSPLAG00000010430	rad54b	90	86.582	ENSACLG00000007826	rad54b	97	86.582	Astatotilapia_calliptera
ENSPLAG00000010430	rad54b	83	68.742	ENSAMXG00000039985	rad54b	95	68.375	Astyanax_mexicanus
ENSPLAG00000010430	rad54b	99	56.064	ENSBTAG00000000632	RAD54B	99	56.064	Bos_taurus
ENSPLAG00000010430	rad54b	75	36.474	WBGene00013792	Y116A8C.13	97	34.415	Caenorhabditis_elegans
ENSPLAG00000010430	rad54b	99	54.767	ENSCJAG00000000080	-	99	59.673	Callithrix_jacchus
ENSPLAG00000010430	rad54b	99	55.839	ENSCAFG00000009179	RAD54B	99	55.839	Canis_familiaris
ENSPLAG00000010430	rad54b	99	55.685	ENSCAFG00020012084	-	99	55.839	Canis_lupus_dingo
ENSPLAG00000010430	rad54b	99	56.170	ENSCHIG00000008230	-	99	56.170	Capra_hircus
ENSPLAG00000010430	rad54b	99	55.380	ENSTSYG00000013234	-	99	55.380	Carlito_syrichta
ENSPLAG00000010430	rad54b	100	54.795	ENSCPOG00000011643	-	100	54.795	Cavia_porcellus
ENSPLAG00000010430	rad54b	99	54.681	ENSCCAG00000011754	-	99	59.537	Cebus_capucinus
ENSPLAG00000010430	rad54b	99	55.272	ENSCATG00000030661	-	99	60.027	Cercocebus_atys
ENSPLAG00000010430	rad54b	99	54.910	ENSCLAG00000010476	-	99	55.143	Chinchilla_lanigera
ENSPLAG00000010430	rad54b	99	54.952	ENSCSAG00000012712	-	99	54.952	Chlorocebus_sabaeus
ENSPLAG00000010430	rad54b	99	57.811	ENSCPBG00000003204	-	98	59.606	Chrysemys_picta_bellii
ENSPLAG00000010430	rad54b	99	55.059	ENSCANG00000017939	-	99	60.300	Colobus_angolensis_palliatus
ENSPLAG00000010430	rad54b	99	54.392	ENSCGRG00001020184	Rad54b	99	54.392	Cricetulus_griseus_chok1gshd
ENSPLAG00000010430	rad54b	99	53.439	ENSCGRG00000016752	Rad54b	99	53.439	Cricetulus_griseus_crigri
ENSPLAG00000010430	rad54b	92	80.000	ENSCSEG00000001601	rad54b	99	80.000	Cynoglossus_semilaevis
ENSPLAG00000010430	rad54b	99	82.511	ENSCVAG00000009200	rad54b	99	82.511	Cyprinodon_variegatus
ENSPLAG00000010430	rad54b	99	61.880	ENSDARG00000092134	rad54b	99	69.003	Danio_rerio
ENSPLAG00000010430	rad54b	99	55.696	ENSDNOG00000015535	-	99	55.696	Dasypus_novemcinctus
ENSPLAG00000010430	rad54b	99	55.710	ENSDORG00000002492	Rad54b	99	55.710	Dipodomys_ordii
ENSPLAG00000010430	rad54b	87	57.927	ENSETEG00000010605	-	100	57.927	Echinops_telfairi
ENSPLAG00000010430	rad54b	100	47.248	ENSEBUG00000009104	rad54b	99	47.248	Eptatretus_burgeri
ENSPLAG00000010430	rad54b	84	60.625	ENSEASG00005004021	-	89	60.625	Equus_asinus_asinus
ENSPLAG00000010430	rad54b	99	55.194	ENSECAG00000021949	-	99	55.194	Equus_caballus
ENSPLAG00000010430	rad54b	70	52.795	ENSEEUG00000008056	-	72	52.795	Erinaceus_europaeus
ENSPLAG00000010430	rad54b	99	70.785	ENSELUG00000009287	rad54b	99	70.842	Esox_lucius
ENSPLAG00000010430	rad54b	99	55.321	ENSFCAG00000015513	-	99	60.680	Felis_catus
ENSPLAG00000010430	rad54b	99	57.489	ENSFALG00000005467	-	99	57.489	Ficedula_albicollis
ENSPLAG00000010430	rad54b	99	55.698	ENSFDAG00000020541	-	99	55.698	Fukomys_damarensis
ENSPLAG00000010430	rad54b	88	85.680	ENSFHEG00000014382	rad54b	90	86.044	Fundulus_heteroclitus
ENSPLAG00000010430	rad54b	84	79.594	ENSGMOG00000014774	rad54b	98	79.594	Gadus_morhua
ENSPLAG00000010430	rad54b	100	56.962	ENSGALG00000043597	RAD54B	100	56.857	Gallus_gallus
ENSPLAG00000010430	rad54b	100	95.411	ENSGAFG00000007901	rad54b	100	95.411	Gambusia_affinis
ENSPLAG00000010430	rad54b	99	75.133	ENSGACG00000009128	rad54b	99	75.133	Gasterosteus_aculeatus
ENSPLAG00000010430	rad54b	99	58.085	ENSGAGG00000018747	-	99	58.085	Gopherus_agassizii
ENSPLAG00000010430	rad54b	99	54.777	ENSGGOG00000023516	-	99	54.777	Gorilla_gorilla
ENSPLAG00000010430	rad54b	99	81.711	ENSHBUG00000016017	rad54b	99	81.711	Haplochromis_burtoni
ENSPLAG00000010430	rad54b	99	55.121	ENSHGLG00000008263	RAD54B	98	55.121	Heterocephalus_glaber_female
ENSPLAG00000010430	rad54b	99	54.460	ENSHGLG00100008108	-	98	54.460	Heterocephalus_glaber_male
ENSPLAG00000010430	rad54b	99	70.267	ENSHCOG00000004764	rad54b	98	74.505	Hippocampus_comes
ENSPLAG00000010430	rad54b	99	61.307	ENSIPUG00000018531	rad54b	99	61.307	Ictalurus_punctatus
ENSPLAG00000010430	rad54b	99	54.105	ENSSTOG00000010791	-	99	54.105	Ictidomys_tridecemlineatus
ENSPLAG00000010430	rad54b	99	54.749	ENSJJAG00000010314	Rad54b	99	54.749	Jaculus_jaculus
ENSPLAG00000010430	rad54b	84	84.694	ENSKMAG00000004744	rad54b	91	84.694	Kryptolebias_marmoratus
ENSPLAG00000010430	rad54b	80	64.980	ENSLACG00000000859	-	100	64.980	Latimeria_chalumnae
ENSPLAG00000010430	rad54b	99	63.561	ENSLOCG00000010100	rad54b	99	68.316	Lepisosteus_oculatus
ENSPLAG00000010430	rad54b	84	59.470	ENSLAFG00000015315	-	97	59.470	Loxodonta_africana
ENSPLAG00000010430	rad54b	99	55.272	ENSMFAG00000031629	-	99	60.027	Macaca_fascicularis
ENSPLAG00000010430	rad54b	99	55.272	ENSMMUG00000005659	-	99	55.272	Macaca_mulatta
ENSPLAG00000010430	rad54b	99	54.873	ENSMNEG00000016408	-	99	54.873	Macaca_nemestrina
ENSPLAG00000010430	rad54b	99	55.096	ENSMLEG00000006946	-	99	55.096	Mandrillus_leucophaeus
ENSPLAG00000010430	rad54b	99	74.973	ENSMAMG00000012269	rad54b	99	74.973	Mastacembelus_armatus
ENSPLAG00000010430	rad54b	99	81.604	ENSMZEG00005005281	rad54b	95	86.456	Maylandia_zebra
ENSPLAG00000010430	rad54b	100	56.757	ENSMGAG00000012024	-	100	56.653	Meleagris_gallopavo
ENSPLAG00000010430	rad54b	99	54.739	ENSMAUG00000013586	Rad54b	99	54.739	Mesocricetus_auratus
ENSPLAG00000010430	rad54b	84	60.349	ENSMICG00000000754	-	90	60.349	Microcebus_murinus
ENSPLAG00000010430	rad54b	100	54.017	ENSMOCG00000020035	Rad54b	100	54.017	Microtus_ochrogaster
ENSPLAG00000010430	rad54b	93	82.657	ENSMMOG00000003394	rad54b	99	82.657	Mola_mola
ENSPLAG00000010430	rad54b	85	59.476	ENSMODG00000007343	-	98	59.476	Monodelphis_domestica
ENSPLAG00000010430	rad54b	68	84.711	ENSMALG00000001520	rad54b	99	84.711	Monopterus_albus
ENSPLAG00000010430	rad54b	99	53.830	MGP_CAROLIEiJ_G0025810	Rad54b	99	54.040	Mus_caroli
ENSPLAG00000010430	rad54b	99	53.305	ENSMUSG00000078773	Rad54b	99	53.305	Mus_musculus
ENSPLAG00000010430	rad54b	99	54.681	MGP_PahariEiJ_G0023933	Rad54b	99	54.392	Mus_pahari
ENSPLAG00000010430	rad54b	99	53.676	MGP_SPRETEiJ_G0026758	Rad54b	99	53.676	Mus_spretus
ENSPLAG00000010430	rad54b	84	60.076	ENSMPUG00000008878	-	97	60.076	Mustela_putorius_furo
ENSPLAG00000010430	rad54b	99	54.873	ENSMLUG00000008953	-	99	54.873	Myotis_lucifugus
ENSPLAG00000010430	rad54b	99	54.497	ENSNGAG00000017537	Rad54b	99	54.488	Nannospalax_galili
ENSPLAG00000010430	rad54b	91	85.484	ENSNBRG00000013394	rad54b	99	85.484	Neolamprologus_brichardi
ENSPLAG00000010430	rad54b	100	54.219	ENSNLEG00000003062	-	100	59.405	Nomascus_leucogenys
ENSPLAG00000010430	rad54b	70	61.557	ENSMEUG00000012426	-	72	61.557	Notamacropus_eugenii
ENSPLAG00000010430	rad54b	77	77.273	ENSODEG00000002650	-	96	77.273	Octodon_degus
ENSPLAG00000010430	rad54b	99	55.945	ENSODEG00000019564	-	99	55.945	Octodon_degus
ENSPLAG00000010430	rad54b	99	82.372	ENSONIG00000006067	rad54b	99	82.409	Oreochromis_niloticus
ENSPLAG00000010430	rad54b	80	61.155	ENSOANG00000011348	-	99	61.155	Ornithorhynchus_anatinus
ENSPLAG00000010430	rad54b	99	54.979	ENSOCUG00000016478	-	99	54.979	Oryctolagus_cuniculus
ENSPLAG00000010430	rad54b	99	79.233	ENSORLG00000008918	rad54b	99	85.514	Oryzias_latipes
ENSPLAG00000010430	rad54b	68	85.514	ENSORLG00020012171	rad54b	99	85.514	Oryzias_latipes_hni
ENSPLAG00000010430	rad54b	99	78.640	ENSORLG00015018536	rad54b	99	78.640	Oryzias_latipes_hsok
ENSPLAG00000010430	rad54b	82	84.156	ENSOMEG00000004345	rad54b	99	84.156	Oryzias_melastigma
ENSPLAG00000010430	rad54b	99	53.326	ENSOGAG00000007854	-	99	53.781	Otolemur_garnettii
ENSPLAG00000010430	rad54b	85	61.721	ENSOARG00000007691	-	98	61.721	Ovis_aries
ENSPLAG00000010430	rad54b	99	53.298	ENSPPAG00000029572	-	99	53.298	Pan_paniscus
ENSPLAG00000010430	rad54b	99	55.567	ENSPPRG00000007571	-	99	60.734	Panthera_pardus
ENSPLAG00000010430	rad54b	78	60.734	ENSPTIG00000012670	-	99	60.734	Panthera_tigris_altaica
ENSPLAG00000010430	rad54b	99	54.468	ENSPTRG00000020427	-	99	59.537	Pan_troglodytes
ENSPLAG00000010430	rad54b	99	55.272	ENSPANG00000019566	-	99	55.272	Papio_anubis
ENSPLAG00000010430	rad54b	99	63.703	ENSPKIG00000014974	rad54b	99	63.941	Paramormyrops_kingsleyae
ENSPLAG00000010430	rad54b	99	57.052	ENSPSIG00000002383	-	95	63.338	Pelodiscus_sinensis
ENSPLAG00000010430	rad54b	99	55.074	ENSPEMG00000012133	Rad54b	99	55.074	Peromyscus_maniculatus_bairdii
ENSPLAG00000010430	rad54b	84	59.016	ENSPMAG00000002916	rad54b	98	58.890	Petromyzon_marinus
ENSPLAG00000010430	rad54b	87	59.417	ENSPCIG00000020151	-	93	59.634	Phascolarctos_cinereus
ENSPLAG00000010430	rad54b	100	99.360	ENSPFOG00000023411	rad54b	100	99.360	Poecilia_formosa
ENSPLAG00000010430	rad54b	100	98.933	ENSPMEG00000016873	rad54b	99	100.000	Poecilia_mexicana
ENSPLAG00000010430	rad54b	100	97.118	ENSPREG00000018443	rad54b	100	97.118	Poecilia_reticulata
ENSPLAG00000010430	rad54b	99	54.017	ENSPPYG00000018750	-	99	54.017	Pongo_abelii
ENSPLAG00000010430	rad54b	99	55.121	ENSPCOG00000026845	-	99	59.918	Propithecus_coquereli
ENSPLAG00000010430	rad54b	79	59.600	ENSPVAG00000000261	-	86	59.600	Pteropus_vampyrus
ENSPLAG00000010430	rad54b	84	83.944	ENSPNYG00000018303	rad54b	96	83.838	Pundamilia_nyererei
ENSPLAG00000010430	rad54b	99	63.330	ENSPNAG00000000295	rad54b	99	63.330	Pygocentrus_nattereri
ENSPLAG00000010430	rad54b	99	54.805	ENSRNOG00000039949	Rad54b	99	54.805	Rattus_norvegicus
ENSPLAG00000010430	rad54b	99	54.739	ENSRBIG00000020419	-	99	54.739	Rhinopithecus_bieti
ENSPLAG00000010430	rad54b	99	54.739	ENSRROG00000039897	-	99	54.739	Rhinopithecus_roxellana
ENSPLAG00000010430	rad54b	79	37.576	YBR073W	RDH54	81	37.091	Saccharomyces_cerevisiae
ENSPLAG00000010430	rad54b	99	54.709	ENSSBOG00000028501	-	99	54.709	Saimiri_boliviensis_boliviensis
ENSPLAG00000010430	rad54b	99	55.031	ENSSHAG00000017038	-	99	55.031	Sarcophilus_harrisii
ENSPLAG00000010430	rad54b	61	72.408	ENSSFOG00015008483	rad54b	89	72.408	Scleropages_formosus
ENSPLAG00000010430	rad54b	99	79.109	ENSSMAG00000018659	rad54b	99	83.019	Scophthalmus_maximus
ENSPLAG00000010430	rad54b	97	81.134	ENSSDUG00000001122	rad54b	97	81.020	Seriola_dumerili
ENSPLAG00000010430	rad54b	99	81.799	ENSSLDG00000013787	rad54b	99	82.011	Seriola_lalandi_dorsalis
ENSPLAG00000010430	rad54b	99	57.249	ENSSPUG00000016497	-	100	57.249	Sphenodon_punctatus
ENSPLAG00000010430	rad54b	99	79.936	ENSSPAG00000012800	rad54b	99	79.936	Stegastes_partitus
ENSPLAG00000010430	rad54b	99	55.508	ENSSSCG00000006101	-	98	61.202	Sus_scrofa
ENSPLAG00000010430	rad54b	99	57.700	ENSTGUG00000011880	-	99	57.700	Taeniopygia_guttata
ENSPLAG00000010430	rad54b	99	75.928	ENSTRUG00000010015	rad54b	99	76.277	Takifugu_rubripes
ENSPLAG00000010430	rad54b	99	52.693	ENSTTRG00000006312	-	99	52.693	Tursiops_truncatus
ENSPLAG00000010430	rad54b	99	55.272	ENSUMAG00000016401	-	99	55.272	Ursus_maritimus
ENSPLAG00000010430	rad54b	99	55.285	ENSVPAG00000003157	-	99	55.285	Vicugna_pacos
ENSPLAG00000010430	rad54b	99	49.097	ENSXETG00000025924	rad54b	98	54.648	Xenopus_tropicalis
ENSPLAG00000010430	rad54b	91	94.505	ENSXMAG00000013141	rad54b	99	94.505	Xiphophorus_maculatus