EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000010452 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6902 bases
Position: chrKQ546359.1:346958-353859
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007990	SM-ATX	PF14438.6	1.9e-07	1	1
ENSPLAP00000007990	LSM14	PF12701.7	1.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003640	-	711	-	ENSPLAP00000007990	236 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000010452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010452	-	62	80.822	ENSG00000257103	LSM14A	93	95.789	Homo_sapiens
ENSPLAG00000010452	-	62	80.537	ENSAPEG00000012119	lsm14aa	93	94.792	Amphiprion_percula
ENSPLAG00000010452	-	62	80.822	ENSANAG00000019299	-	93	95.789	Aotus_nancymaae
ENSPLAG00000010452	-	72	60.694	ENSANAG00000031175	-	94	76.842	Aotus_nancymaae
ENSPLAG00000010452	-	62	80.822	ENSCJAG00000010360	LSM14A	93	95.789	Callithrix_jacchus
ENSPLAG00000010452	-	61	77.931	ENSCCAG00000028536	-	99	89.899	Cebus_capucinus
ENSPLAG00000010452	-	61	71.724	ENSCCAG00000038098	-	94	86.316	Cebus_capucinus
ENSPLAG00000010452	-	61	67.586	ENSCCAG00000037290	-	90	79.592	Cebus_capucinus
ENSPLAG00000010452	-	62	87.755	ENSCSEG00000021457	lsm14aa	95	91.753	Cynoglossus_semilaevis
ENSPLAG00000010452	-	64	82.237	ENSDARG00000006600	lsm14aa	99	95.238	Danio_rerio
ENSPLAG00000010452	-	61	65.517	ENSEBUG00000012576	LSM14A	71	65.306	Eptatretus_burgeri
ENSPLAG00000010452	-	64	87.821	ENSLBEG00000010487	lsm14aa	88	95.098	Labrus_bergylta
ENSPLAG00000010452	-	66	76.582	MGP_CAROLIEiJ_G0029574	Lsm14a	65	70.588	Mus_caroli
ENSPLAG00000010452	-	66	76.582	ENSMUSG00000066568	Lsm14a	65	70.588	Mus_musculus
ENSPLAG00000010452	-	66	76.582	MGP_SPRETEiJ_G0030673	Lsm14a	65	70.588	Mus_spretus
ENSPLAG00000010452	-	61	72.414	ENSNLEG00000034705	-	95	75.424	Nomascus_leucogenys
ENSPLAG00000010452	-	60	70.213	ENSOMEG00000016637	-	65	86.792	Oryzias_melastigma
ENSPLAG00000010452	-	61	80.690	ENSPTRG00000040949	-	100	91.837	Pan_troglodytes
ENSPLAG00000010452	-	61	81.250	ENSPMGG00000000220	lsm14aa	89	94.624	Periophthalmus_magnuspinnatus
ENSPLAG00000010452	-	70	99.394	ENSPMEG00000018237	-	64	99.394	Poecilia_mexicana
ENSPLAG00000010452	-	61	79.861	ENSSBOG00000020141	-	93	94.737	Saimiri_boliviensis_boliviensis
ENSPLAG00000010452	-	59	72.662	ENSSBOG00000021178	-	67	82.474	Saimiri_boliviensis_boliviensis
ENSPLAG00000010452	-	61	61.379	ENSSBOG00000023312	-	90	80.435	Saimiri_boliviensis_boliviensis
ENSPLAG00000010452	-	61	79.310	ENSUAMG00000017314	LSM14A	91	89.423	Ursus_americanus