EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000010456 (Gene tree)
Gene ID: 106951725
Gene Symbol: ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3948 bases
Position: chrKQ545785.1:338036-341983
Accession: 106951725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000008002	MRP-S27	PF10037.9	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003621	-	1826	XM_015039397	ENSPLAP00000008002	383 (aa)	XP_014894883	UPI00072DD60C

Gene Model

Click here to download ENSPLAG00000010456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010456	ptcd2	91	44.253	ENSG00000049883	PTCD2	100	39.394	Homo_sapiens
ENSPLAG00000010456	ptcd2	99	73.421	ENSAPOG00000020682	ptcd2	99	73.421	Acanthochromis_polyacanthus
ENSPLAG00000010456	ptcd2	91	44.413	ENSAMEG00000007194	PTCD2	84	44.648	Ailuropoda_melanoleuca
ENSPLAG00000010456	ptcd2	90	66.954	ENSACIG00000002053	ptcd2	100	66.954	Amphilophus_citrinellus
ENSPLAG00000010456	ptcd2	99	75.263	ENSAOCG00000006616	ptcd2	98	75.263	Amphiprion_ocellaris
ENSPLAG00000010456	ptcd2	99	75.263	ENSAPEG00000022926	ptcd2	98	75.263	Amphiprion_percula
ENSPLAG00000010456	ptcd2	90	47.262	ENSACAG00000009747	PTCD2	89	47.262	Anolis_carolinensis
ENSPLAG00000010456	ptcd2	91	43.391	ENSANAG00000029353	PTCD2	83	43.789	Aotus_nancymaae
ENSPLAG00000010456	ptcd2	99	76.053	ENSACLG00000027742	ptcd2	98	76.053	Astatotilapia_calliptera
ENSPLAG00000010456	ptcd2	93	48.468	ENSAMXG00000029404	ptcd2	91	49.704	Astyanax_mexicanus
ENSPLAG00000010456	ptcd2	96	42.895	ENSBTAG00000014675	PTCD2	93	42.897	Bos_taurus
ENSPLAG00000010456	ptcd2	91	42.816	ENSCJAG00000016364	PTCD2	83	43.478	Callithrix_jacchus
ENSPLAG00000010456	ptcd2	91	46.176	ENSCAFG00000007982	PTCD2	78	46.687	Canis_familiaris
ENSPLAG00000010456	ptcd2	90	46.243	ENSCAFG00020019147	PTCD2	91	46.769	Canis_lupus_dingo
ENSPLAG00000010456	ptcd2	92	44.321	ENSCHIG00000017118	PTCD2	89	44.412	Capra_hircus
ENSPLAG00000010456	ptcd2	93	42.318	ENSCPOG00000040168	PTCD2	97	42.318	Cavia_porcellus
ENSPLAG00000010456	ptcd2	71	43.956	ENSCCAG00000021996	-	84	43.956	Cebus_capucinus
ENSPLAG00000010456	ptcd2	91	43.678	ENSCCAG00000029389	-	90	43.678	Cebus_capucinus
ENSPLAG00000010456	ptcd2	97	44.385	ENSCATG00000019069	PTCD2	98	44.385	Cercocebus_atys
ENSPLAG00000010456	ptcd2	92	42.659	ENSCLAG00000000072	PTCD2	87	42.985	Chinchilla_lanigera
ENSPLAG00000010456	ptcd2	91	45.115	ENSCSAG00000015623	PTCD2	98	44.000	Chlorocebus_sabaeus
ENSPLAG00000010456	ptcd2	70	50.588	ENSCHOG00000010634	PTCD2	71	50.588	Choloepus_hoffmanni
ENSPLAG00000010456	ptcd2	90	45.845	ENSCPBG00000000216	PTCD2	85	45.714	Chrysemys_picta_bellii
ENSPLAG00000010456	ptcd2	91	45.402	ENSCANG00000035636	PTCD2	90	45.402	Colobus_angolensis_palliatus
ENSPLAG00000010456	ptcd2	93	44.414	ENSCGRG00001015289	Ptcd2	80	44.414	Cricetulus_griseus_chok1gshd
ENSPLAG00000010456	ptcd2	93	44.414	ENSCGRG00000006193	Ptcd2	80	44.414	Cricetulus_griseus_crigri
ENSPLAG00000010456	ptcd2	100	81.201	ENSCVAG00000001285	ptcd2	98	81.201	Cyprinodon_variegatus
ENSPLAG00000010456	ptcd2	93	51.240	ENSDARG00000035391	ptcd2	88	51.929	Danio_rerio
ENSPLAG00000010456	ptcd2	90	46.705	ENSDNOG00000008719	PTCD2	91	46.705	Dasypus_novemcinctus
ENSPLAG00000010456	ptcd2	97	43.386	ENSDORG00000004921	Ptcd2	98	43.386	Dipodomys_ordii
ENSPLAG00000010456	ptcd2	98	39.231	ENSETEG00000016542	PTCD2	94	39.510	Echinops_telfairi
ENSPLAG00000010456	ptcd2	96	43.501	ENSEASG00005018038	PTCD2	93	43.539	Equus_asinus_asinus
ENSPLAG00000010456	ptcd2	91	45.014	ENSECAG00000007022	PTCD2	85	45.152	Equus_caballus
ENSPLAG00000010456	ptcd2	94	43.490	ENSEEUG00000014031	PTCD2	84	44.073	Erinaceus_europaeus
ENSPLAG00000010456	ptcd2	95	58.856	ENSELUG00000003584	ptcd2	89	59.412	Esox_lucius
ENSPLAG00000010456	ptcd2	82	44.762	ENSFCAG00000045432	PTCD2	68	46.897	Felis_catus
ENSPLAG00000010456	ptcd2	85	42.813	ENSFALG00000010299	PTCD2	92	44.518	Ficedula_albicollis
ENSPLAG00000010456	ptcd2	92	42.936	ENSFDAG00000018461	PTCD2	87	43.713	Fukomys_damarensis
ENSPLAG00000010456	ptcd2	100	60.622	ENSGMOG00000003637	ptcd2	100	60.622	Gadus_morhua
ENSPLAG00000010456	ptcd2	92	42.938	ENSGALG00000038260	PTCD2	99	41.161	Gallus_gallus
ENSPLAG00000010456	ptcd2	90	49.857	ENSGAGG00000021952	PTCD2	89	49.568	Gopherus_agassizii
ENSPLAG00000010456	ptcd2	91	44.253	ENSGGOG00000010695	PTCD2	90	44.253	Gorilla_gorilla
ENSPLAG00000010456	ptcd2	98	75.733	ENSHBUG00000009191	ptcd2	97	75.733	Haplochromis_burtoni
ENSPLAG00000010456	ptcd2	95	42.473	ENSHGLG00000001234	PTCD2	90	43.478	Heterocephalus_glaber_female
ENSPLAG00000010456	ptcd2	95	42.473	ENSHGLG00100015419	PTCD2	90	43.478	Heterocephalus_glaber_male
ENSPLAG00000010456	ptcd2	99	62.402	ENSHCOG00000001703	ptcd2	99	62.597	Hippocampus_comes
ENSPLAG00000010456	ptcd2	84	56.832	ENSIPUG00000006080	ptcd2	84	56.832	Ictalurus_punctatus
ENSPLAG00000010456	ptcd2	91	44.126	ENSSTOG00000006596	PTCD2	91	44.126	Ictidomys_tridecemlineatus
ENSPLAG00000010456	ptcd2	91	47.278	ENSJJAG00000024388	Ptcd2	84	47.222	Jaculus_jaculus
ENSPLAG00000010456	ptcd2	97	65.860	ENSKMAG00000009329	ptcd2	95	66.667	Kryptolebias_marmoratus
ENSPLAG00000010456	ptcd2	99	65.625	ENSLBEG00000024871	ptcd2	98	65.625	Labrus_bergylta
ENSPLAG00000010456	ptcd2	97	53.989	ENSLOCG00000011122	ptcd2	98	53.989	Lepisosteus_oculatus
ENSPLAG00000010456	ptcd2	77	46.906	ENSLAFG00000004115	PTCD2	98	47.231	Loxodonta_africana
ENSPLAG00000010456	ptcd2	97	44.800	ENSMFAG00000031516	PTCD2	96	44.800	Macaca_fascicularis
ENSPLAG00000010456	ptcd2	91	45.690	ENSMNEG00000007537	PTCD2	91	45.690	Macaca_nemestrina
ENSPLAG00000010456	ptcd2	97	44.267	ENSMLEG00000031093	PTCD2	96	44.267	Mandrillus_leucophaeus
ENSPLAG00000010456	ptcd2	98	70.822	ENSMAMG00000018529	ptcd2	98	70.822	Mastacembelus_armatus
ENSPLAG00000010456	ptcd2	99	76.053	ENSMZEG00005003625	ptcd2	98	76.053	Maylandia_zebra
ENSPLAG00000010456	ptcd2	91	43.391	ENSMGAG00000005033	PTCD2	100	43.391	Meleagris_gallopavo
ENSPLAG00000010456	ptcd2	93	37.330	ENSMAUG00000020253	Ptcd2	96	37.330	Mesocricetus_auratus
ENSPLAG00000010456	ptcd2	91	45.115	ENSMICG00000004535	PTCD2	83	45.963	Microcebus_murinus
ENSPLAG00000010456	ptcd2	91	45.115	ENSMOCG00000019985	Ptcd2	97	43.935	Microtus_ochrogaster
ENSPLAG00000010456	ptcd2	92	47.606	ENSMODG00000001695	PTCD2	87	48.048	Monodelphis_domestica
ENSPLAG00000010456	ptcd2	100	70.757	ENSMALG00000022372	ptcd2	100	70.757	Monopterus_albus
ENSPLAG00000010456	ptcd2	91	44.253	MGP_CAROLIEiJ_G0018829	Ptcd2	91	44.253	Mus_caroli
ENSPLAG00000010456	ptcd2	91	43.966	ENSMUSG00000021650	Ptcd2	91	43.966	Mus_musculus
ENSPLAG00000010456	ptcd2	91	45.402	MGP_PahariEiJ_G0015904	Ptcd2	91	45.402	Mus_pahari
ENSPLAG00000010456	ptcd2	91	44.540	MGP_SPRETEiJ_G0019711	Ptcd2	91	44.540	Mus_spretus
ENSPLAG00000010456	ptcd2	91	45.845	ENSMPUG00000014401	PTCD2	85	46.177	Mustela_putorius_furo
ENSPLAG00000010456	ptcd2	91	43.966	ENSMLUG00000007374	PTCD2	87	43.917	Myotis_lucifugus
ENSPLAG00000010456	ptcd2	91	44.540	ENSNGAG00000005027	Ptcd2	85	44.954	Nannospalax_galili
ENSPLAG00000010456	ptcd2	86	72.644	ENSNBRG00000000092	-	100	72.644	Neolamprologus_brichardi
ENSPLAG00000010456	ptcd2	99	76.053	ENSNBRG00000008174	ptcd2	99	76.053	Neolamprologus_brichardi
ENSPLAG00000010456	ptcd2	90	44.092	ENSNLEG00000004516	PTCD2	89	44.092	Nomascus_leucogenys
ENSPLAG00000010456	ptcd2	91	45.977	ENSOPRG00000007290	PTCD2	90	45.977	Ochotona_princeps
ENSPLAG00000010456	ptcd2	93	43.869	ENSODEG00000016417	PTCD2	89	44.868	Octodon_degus
ENSPLAG00000010456	ptcd2	85	76.380	ENSONIG00000011269	ptcd2	95	76.380	Oreochromis_niloticus
ENSPLAG00000010456	ptcd2	92	44.663	ENSOCUG00000007970	PTCD2	87	44.277	Oryctolagus_cuniculus
ENSPLAG00000010456	ptcd2	100	68.930	ENSORLG00000003851	ptcd2	98	68.930	Oryzias_latipes
ENSPLAG00000010456	ptcd2	100	68.146	ENSORLG00020009823	ptcd2	100	68.146	Oryzias_latipes_hni
ENSPLAG00000010456	ptcd2	90	66.377	ENSORLG00015016777	ptcd2	99	66.377	Oryzias_latipes_hsok
ENSPLAG00000010456	ptcd2	100	68.146	ENSOMEG00000012396	ptcd2	93	68.146	Oryzias_melastigma
ENSPLAG00000010456	ptcd2	91	45.977	ENSOGAG00000008390	PTCD2	90	45.977	Otolemur_garnettii
ENSPLAG00000010456	ptcd2	92	44.598	ENSOARG00000005087	PTCD2	87	44.706	Ovis_aries
ENSPLAG00000010456	ptcd2	91	44.253	ENSPPAG00000028480	PTCD2	90	44.253	Pan_paniscus
ENSPLAG00000010456	ptcd2	91	43.966	ENSPTRG00000016968	PTCD2	90	43.966	Pan_troglodytes
ENSPLAG00000010456	ptcd2	90	45.507	ENSPANG00000006611	PTCD2	89	45.507	Papio_anubis
ENSPLAG00000010456	ptcd2	95	53.425	ENSPKIG00000019896	ptcd2	93	53.186	Paramormyrops_kingsleyae
ENSPLAG00000010456	ptcd2	79	49.013	ENSPSIG00000014559	PTCD2	94	49.013	Pelodiscus_sinensis
ENSPLAG00000010456	ptcd2	96	44.504	ENSPEMG00000000884	Ptcd2	91	44.857	Peromyscus_maniculatus_bairdii
ENSPLAG00000010456	ptcd2	92	48.169	ENSPCIG00000029047	PTCD2	92	48.169	Phascolarctos_cinereus
ENSPLAG00000010456	ptcd2	100	97.128	ENSPREG00000021797	ptcd2	98	97.128	Poecilia_reticulata
ENSPLAG00000010456	ptcd2	91	38.793	ENSPPYG00000015543	PTCD2	88	38.793	Pongo_abelii
ENSPLAG00000010456	ptcd2	75	40.484	ENSPCAG00000006806	PTCD2	92	40.484	Procavia_capensis
ENSPLAG00000010456	ptcd2	91	45.115	ENSPVAG00000010935	PTCD2	90	45.115	Pteropus_vampyrus
ENSPLAG00000010456	ptcd2	99	76.053	ENSPNYG00000003122	ptcd2	98	76.053	Pundamilia_nyererei
ENSPLAG00000010456	ptcd2	100	60.104	ENSPNAG00000021490	ptcd2	93	61.003	Pygocentrus_nattereri
ENSPLAG00000010456	ptcd2	91	47.126	ENSRNOG00000028403	Ptcd2	91	47.126	Rattus_norvegicus
ENSPLAG00000010456	ptcd2	91	41.667	ENSRBIG00000032929	PTCD2	89	41.667	Rhinopithecus_bieti
ENSPLAG00000010456	ptcd2	91	45.115	ENSRROG00000000080	PTCD2	91	45.115	Rhinopithecus_roxellana
ENSPLAG00000010456	ptcd2	90	43.516	ENSSBOG00000018911	PTCD2	91	43.516	Saimiri_boliviensis_boliviensis
ENSPLAG00000010456	ptcd2	99	44.675	ENSSHAG00000003833	PTCD2	93	44.475	Sarcophilus_harrisii
ENSPLAG00000010456	ptcd2	100	53.886	ENSSFOG00015015415	ptcd2	100	53.886	Scleropages_formosus
ENSPLAG00000010456	ptcd2	97	63.807	ENSSMAG00000010350	ptcd2	94	63.807	Scophthalmus_maximus
ENSPLAG00000010456	ptcd2	98	71.618	ENSSDUG00000008142	ptcd2	94	71.618	Seriola_dumerili
ENSPLAG00000010456	ptcd2	98	71.353	ENSSLDG00000015284	ptcd2	98	71.353	Seriola_lalandi_dorsalis
ENSPLAG00000010456	ptcd2	72	40.876	ENSSARG00000004983	PTCD2	87	40.876	Sorex_araneus
ENSPLAG00000010456	ptcd2	92	43.662	ENSSPUG00000000176	PTCD2	84	45.289	Sphenodon_punctatus
ENSPLAG00000010456	ptcd2	98	65.867	ENSSPAG00000008591	ptcd2	92	68.258	Stegastes_partitus
ENSPLAG00000010456	ptcd2	91	44.540	ENSSSCG00000016975	PTCD2	75	45.912	Sus_scrofa
ENSPLAG00000010456	ptcd2	84	46.106	ENSTGUG00000005705	PTCD2	93	46.106	Taeniopygia_guttata
ENSPLAG00000010456	ptcd2	91	43.875	ENSTBEG00000016559	PTCD2	90	43.875	Tupaia_belangeri
ENSPLAG00000010456	ptcd2	91	45.821	ENSTTRG00000011851	PTCD2	84	46.012	Tursiops_truncatus
ENSPLAG00000010456	ptcd2	91	44.699	ENSUAMG00000007583	PTCD2	76	44.954	Ursus_americanus
ENSPLAG00000010456	ptcd2	91	44.699	ENSUMAG00000007666	PTCD2	85	44.954	Ursus_maritimus
ENSPLAG00000010456	ptcd2	91	43.678	ENSVPAG00000009597	PTCD2	84	43.731	Vicugna_pacos
ENSPLAG00000010456	ptcd2	91	45.977	ENSVVUG00000007299	-	88	46.131	Vulpes_vulpes
ENSPLAG00000010456	ptcd2	100	43.434	ENSXETG00000031652	PTCD2	92	43.288	Xenopus_tropicalis
ENSPLAG00000010456	ptcd2	100	93.211	ENSXMAG00000005940	ptcd2	91	93.211	Xiphophorus_maculatus